RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 PRPS1P60891 318 aa16.77■□□□□ 0.27
HOXC6-202ENST00000394331 SLC10A1Q14973 349 aa16.77■□□□□ 0.27
HOXC6-202ENST00000394331 SHHQ15465 462 aa16.77■□□□□ 0.27
HOXC6-202ENST00000394331 WDR38Q5JTN6 314 aa16.77■□□□□ 0.27
HOXC6-202ENST00000394331 RPUSD3Q6P087 351 aaKnown RBP16.77■□□□□ 0.27
HOXC6-202ENST00000394331 LEG1Q6P5S2 330 aa16.77■□□□□ 0.27
HOXC6-202ENST00000394331 C5orf24Q7Z6I8 188 aa16.77■□□□□ 0.27
HOXC6-202ENST00000394331 ZNF615Q8N8J6 731 aa16.77■□□□□ 0.27
HOXC6-202ENST00000394331 S1PR5Q9H228 398 aa16.77■□□□□ 0.27
HOXC6-202ENST00000394331 FBXL17Q9UF56 701 aa16.77■□□□□ 0.27
HOXC6-202ENST00000394331 GPR132Q9UNW8 380 aa16.77■□□□□ 0.27
HOXC6-202ENST00000394331 ALOX5APP20292 161 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 RPL12P30050 165 aaKnown RBP16.76■□□□□ 0.27
HOXC6-202ENST00000394331 DHPSP49366 369 aaPredicted RBP16.76■□□□□ 0.27
HOXC6-202ENST00000394331 SLC35A1P78382 337 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 GLYATL3Q5SZD4 288 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 OR2T2Q6IF00 324 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 TMEM92Q6UXU6 159 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 GPR137CQ8N3F9 429 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 PLPP7Q8NBV4 271 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 TMEM230Q96A57 120 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 C5orf34Q96MH7 638 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 G6PC3Q9BUM1 346 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 C5orf42Q9H799 3197 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 STMND1H3BQB6 276 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 EREGO14944 169 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 ZNF264O43296 627 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 SEMA4FO95754 770 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 IGKV1D-16P01601 117 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 C1orf100Q5SVJ3 147 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 GGNBP1Q5YKI7 109 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 CYB5R2Q6BCY4 276 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 CLEC18BQ6UXF7 455 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 ZNF664Q8N3J9 261 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 OR4N2Q8NGD1 307 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 MARCH1Q8TCQ1 289 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 SLC25A43Q8WUT9 341 aaPredicted RBP16.76■□□□□ 0.27
HOXC6-202ENST00000394331 VSTM2LQ96N03 204 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 ULBP3Q9BZM4 244 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 SLC2A4RGQ9NR83 387 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 VSX1Q9NZR4 365 aaPredicted RBP16.76■□□□□ 0.27
HOXC6-202ENST00000394331 TOX3O15405 576 aaPredicted RBP16.76■□□□□ 0.27
HOXC6-202ENST00000394331 TFF2Q03403 129 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 ZNF101Q8IZC7 436 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 CARFQ8N187 725 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 SUMF2Q8NBJ7 301 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 OR10C1Q96KK4 312 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 TCEAL2Q9H3H9 227 aaPredicted RBP16.76■□□□□ 0.27
HOXC6-202ENST00000394331 Q9N2J8 555 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 FAM60AQ9NP50 221 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 SLCO1B1Q9Y6L6 691 aa16.76■□□□□ 0.27
HOXC6-202ENST00000394331 K7EPK0 472 aa16.75■□□□□ 0.27
HOXC6-202ENST00000394331 ZNF217O75362 1048 aa16.75■□□□□ 0.27
HOXC6-202ENST00000394331 SCGNO76038 276 aa16.75■□□□□ 0.27
HOXC6-202ENST00000394331 GZMBP10144 247 aa16.75■□□□□ 0.27
HOXC6-202ENST00000394331 PPP1CAP62136 330 aa16.75■□□□□ 0.27
HOXC6-202ENST00000394331 PRR18Q8N4B5 295 aa16.75■□□□□ 0.27
HOXC6-202ENST00000394331 FAM71E2Q8N5Q1 922 aa16.75■□□□□ 0.27
HOXC6-202ENST00000394331 SCGB3A2Q96PL1 93 aa16.75■□□□□ 0.27
HOXC6-202ENST00000394331 MRPS18BQ9Y676 258 aaKnown RBP16.75■□□□□ 0.27
HOXC6-202ENST00000394331 TCRBV21S2A2A0A5A6 115 aa16.75■□□□□ 0.27
HOXC6-202ENST00000394331 FITM1A5D6W6 292 aa16.75■□□□□ 0.27
HOXC6-202ENST00000394331 TLCD2A6NGC4 264 aa16.75■□□□□ 0.27
HOXC6-202ENST00000394331 HCRTR1O43613 425 aa16.75■□□□□ 0.27
HOXC6-202ENST00000394331 NME2P1O60361 137 aa16.75■□□□□ 0.27
HOXC6-202ENST00000394331 NR2C1P13056 603 aa16.75■□□□□ 0.27
HOXC6-202ENST00000394331 GABRR1P24046 479 aa16.75■□□□□ 0.27
HOXC6-202ENST00000394331 CDKN2AP42771 156 aaKnown RBP16.75■□□□□ 0.27
HOXC6-202ENST00000394331 KIRREL2Q6UWL6 708 aa16.75■□□□□ 0.27
HOXC6-202ENST00000394331 SFTPA2Q8IWL1 248 aa16.75■□□□□ 0.27
HOXC6-202ENST00000394331 C9orf40Q8IXQ3 194 aa16.75■□□□□ 0.27
HOXC6-202ENST00000394331 SLC22A18ASQ8N1D0 253 aa16.75■□□□□ 0.27
HOXC6-202ENST00000394331 GINS3Q9BRX5 216 aa16.75■□□□□ 0.27
HOXC6-202ENST00000394331 NELFAQ9H3P2 528 aa16.75■□□□□ 0.27
HOXC6-202ENST00000394331 ZMAT3Q9HA38 289 aaKnown RBP16.75■□□□□ 0.27
HOXC6-202ENST00000394331 PITPNC1Q9UKF7 332 aa16.75■□□□□ 0.27
HOXC6-202ENST00000394331 RAB22AQ9UL26 194 aa16.75■□□□□ 0.27
HOXC6-202ENST00000394331 BLACEA4D250 179 aa16.74■□□□□ 0.27
HOXC6-202ENST00000394331 CD200P41217 278 aa16.74■□□□□ 0.27
HOXC6-202ENST00000394331 HHEXQ03014 270 aa16.74■□□□□ 0.27
HOXC6-202ENST00000394331 MRPL52Q86TS9 123 aaKnown RBP16.74■□□□□ 0.27
HOXC6-202ENST00000394331 ARHGEF39Q8N4T4 335 aa16.74■□□□□ 0.27
HOXC6-202ENST00000394331 OR10J5Q8NHC4 309 aa16.74■□□□□ 0.27
HOXC6-202ENST00000394331 C5orf66Q9H5L9 145 aa16.74■□□□□ 0.27
HOXC6-202ENST00000394331 CLEC1BQ9P126 229 aa16.74■□□□□ 0.27
HOXC6-202ENST00000394331 ANAPC10Q9UM13 185 aa16.74■□□□□ 0.27
HOXC6-202ENST00000394331 PHOX2AO14813 284 aa16.74■□□□□ 0.27
HOXC6-202ENST00000394331 HEXBP07686 556 aa16.74■□□□□ 0.27
HOXC6-202ENST00000394331 METTL15P1P0C7V9 234 aa16.74■□□□□ 0.27
HOXC6-202ENST00000394331 TRGC1P0CF51 173 aa16.74■□□□□ 0.27
HOXC6-202ENST00000394331 ZNF708P17019 499 aa16.74■□□□□ 0.27
HOXC6-202ENST00000394331 FCGR2CP31995 323 aa16.74■□□□□ 0.27
HOXC6-202ENST00000394331 CAMLGP49069 296 aa16.74■□□□□ 0.27
HOXC6-202ENST00000394331 ZNF616Q08AN1 781 aa16.74■□□□□ 0.27
HOXC6-202ENST00000394331 DEFB110Q30KQ9 67 aa16.74■□□□□ 0.27
HOXC6-202ENST00000394331 VAX1Q5SQQ9 334 aa16.74■□□□□ 0.27
HOXC6-202ENST00000394331 ZNF761Q86XN6 746 aaPredicted RBP16.74■□□□□ 0.27
HOXC6-202ENST00000394331 METTL21AQ8WXB1 218 aa16.74■□□□□ 0.27
HOXC6-202ENST00000394331 PUS1Q9Y606 427 aaKnown RBP eCLIP16.74■□□□□ 0.27
HOXC6-202ENST00000394331 HS3ST3B1Q9Y662 390 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms