RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 ZNF43P17038 809 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 S100A10P60903 97 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 CSNK2A1P68400 391 aaPredicted RBP12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 CBLN2Q8IUK8 224 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 CSNK2A3Q8NEV1 391 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 NUBPLQ8TB37 319 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 WDR77Q9BQA1 342 aaPredicted RBP12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 ELL3Q9HB65 397 aaPredicted RBP12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 TREM1Q9NP99 234 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 FBLN5Q9UBX5 448 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 MYO7BQ6PIF6 2116 aa12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 ZNF726A6NNF4 738 aa12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 F8W036 122 aa12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 NAT1P18440 290 aa12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 IGFBP4P22692 258 aa12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 PTGDSP41222 190 aa12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 P2RY4P51582 365 aa12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 SUPT4H1P63272 117 aaKnown RBP12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 BLOC1S1P78537 153 aa12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 PGAP1Q75T13 922 aa12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 LDLRAD3Q86YD5 345 aa12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 RTBDNQ9BSG5 229 aaPredicted RBP12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 MOB1AQ9H8S9 216 aa12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 HPF1Q9NWY4 346 aa12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 LHX6Q9UPM6 363 aa12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 WIF1Q9Y5W5 379 aa12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 F5H5K5 113 aa12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 F8VVB4 439 aa12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 F8VWA3 439 aa12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 FGF16O43320 207 aa12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 KNG1P01042 644 aa12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 SERPINA2P20848 420 aa12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 SLC6A9P48067 706 aa12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 SNU13P55769 128 aaKnown RBP12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 CCDC157Q569K6 752 aa12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 SLC25A47Q6Q0C1 308 aa12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 ZNF574Q6ZN55 896 aaPredicted RBP12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 OR56B1Q8NGI3 324 aa12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 PGAM5Q96HS1 289 aa12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 OR10A2Q9H208 303 aa12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 PNRC2Q9NPJ4 139 aaKnown RBP12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 EHFQ9NZC4 300 aa12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 PURGQ9UJV8 347 aaKnown RBP12.29□□□□□ -0.44
GAPVD1-205ENST00000394084 RAB19A4D1S5 217 aa12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 MFNGO00587 321 aa12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 CYCSP99999 105 aaKnown RBP12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 RAB32Q13637 225 aa12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 PABPC1L2AQ5JQF8 200 aa12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 VAX1Q5SQQ9 334 aa12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 UQCC3Q6UW78 93 aa12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 DRAM2Q6UX65 266 aa12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 CARFQ8N187 725 aa12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 ARRDC1Q8N5I2 433 aa12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 ARL11Q969Q4 196 aa12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 CPNE2Q96FN4 548 aaPredicted RBP12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 CDC6Q99741 560 aa12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 URM1Q9BTM9 101 aaKnown RBP12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 TGIF2Q9GZN2 237 aa12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 ZNF768Q9H5H4 540 aaKnown RBP12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 ACKR4Q9NPB9 350 aa12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 NCOA6Q14686 2063 aaPredicted RBP12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 ZNF705EA8MWA4 302 aaPredicted RBP12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 STMND1H3BQB6 276 aa12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 SCRG1O75711 98 aa12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 SFTPBP07988 381 aa12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 SRFP11831 508 aa12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 BLVRBP30043 206 aaPredicted RBP12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 CLDN17P56750 224 aa12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 HAGHLQ6PII5 290 aaPredicted RBP12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 SLC30A7Q8NEW0 376 aa12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 CADM4Q8NFZ8 388 aa12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 STOML3Q8TAV4 291 aa12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 RNF141Q8WVD5 230 aa12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 HRH4Q9H3N8 390 aa12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 MYOTQ9UBF9 498 aa12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 ZNF629Q9UEG4 869 aaPredicted RBP12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 FAM96BQ9Y3D0 163 aa12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 LCN10Q6JVE6 187 aa12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 DOK3Q7L591 496 aa12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 DTX1Q86Y01 620 aa12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 IQCF2Q8IXL9 164 aa12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 SVBPQ8N300 66 aa12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 NUDT16L1Q9BRJ7 211 aaKnown RBP12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 ZNF701Q9NV72 531 aaPredicted RBP12.28□□□□□ -0.44
GAPVD1-205ENST00000394084 TRBV6-7A0A0A0MS04 114 aa12.27□□□□□ -0.44
GAPVD1-205ENST00000394084 PRKACAP17612 351 aa12.27□□□□□ -0.44
GAPVD1-205ENST00000394084 FPR2P25090 351 aa12.27□□□□□ -0.44
GAPVD1-205ENST00000394084 SCRN3Q0VDG4 424 aa12.27□□□□□ -0.44
GAPVD1-205ENST00000394084 KISS1Q15726 138 aa12.27□□□□□ -0.44
GAPVD1-205ENST00000394084 AADACL3Q5VUY0 350 aa12.27□□□□□ -0.44
GAPVD1-205ENST00000394084 LRRC18Q8N456 261 aa12.27□□□□□ -0.44
GAPVD1-205ENST00000394084 OR2M3Q8NG83 312 aa12.27□□□□□ -0.44
GAPVD1-205ENST00000394084 OR5L2Q8NGL0 311 aa12.27□□□□□ -0.44
GAPVD1-205ENST00000394084 OR4A4PQ8NGN8 299 aa12.27□□□□□ -0.44
GAPVD1-205ENST00000394084 PIGTQ969N2 578 aa12.27□□□□□ -0.44
GAPVD1-205ENST00000394084 CRB3Q9BUF7 120 aa12.27□□□□□ -0.44
GAPVD1-205ENST00000394084 TLNRD1Q9H1K6 362 aa12.27□□□□□ -0.44
GAPVD1-205ENST00000394084 FANCFQ9NPI8 374 aa12.27□□□□□ -0.44
GAPVD1-205ENST00000394084 SEMA5BQ9P283 1151 aa12.27□□□□□ -0.44
GAPVD1-205ENST00000394084 IGHV3-15A0A0B4J1V0 119 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms