RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 ZNF239Q16600 458 aaKnown RBP9.89□□□□□ -0.83
CUX1-204ENST00000393824 DNLZQ5SXM8 178 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 COX15Q7KZN9 410 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 CD163Q86VB7 1156 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 ZNF584Q8IVC4 421 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 PRSS35Q8N3Z0 413 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 SECTM1Q8WVN6 248 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 LIPHQ8WWY8 451 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 ASB17Q8WXJ9 295 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 SLAMF9Q96A28 289 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 RASD2Q96D21 266 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 ARSGQ96EG1 525 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 PTCHD1Q96NR3 888 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 DCBLD2Q96PD2 775 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 LMF2Q9BU23 707 aaKnown RBP9.89□□□□□ -0.83
CUX1-204ENST00000393824 SLC5A7Q9GZV3 580 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 PRDM13Q9H4Q3 707 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 PARPBPQ9NWS1 579 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 DNAJB11Q9UBS4 358 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 STARD10Q9Y365 291 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 C13orf42A0A1B0GVH6 325 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 FAM171A2A8MVW0 826 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 LDLRAD4O15165 306 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 LRP3O75074 770 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 SCRG1O75711 98 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 STK17BO94768 372 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 HIST1H1BP16401 226 aaKnown RBP9.89□□□□□ -0.83
CUX1-204ENST00000393824 CDKN2AP42771 156 aaKnown RBP9.89□□□□□ -0.83
CUX1-204ENST00000393824 OR2B8PP59922 312 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 EGR3Q06889 387 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 PMPCAQ10713 525 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 NSUN5P2Q63ZY6 315 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 FDX2Q6P4F2 183 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 FAM24BQ8N5W8 94 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 ZNF383Q8NA42 475 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 OR4S1Q8NGB4 309 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 CASTOR1Q8WTX7 329 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 LMF1Q96S06 567 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 ZNF587Q96SQ5 575 aaPredicted RBP9.89□□□□□ -0.83
CUX1-204ENST00000393824 PRRX2Q99811 253 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 SOX7Q9BT81 388 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 LANCL2Q9NS86 450 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 BOD1L1Q8NFC6 3051 aa9.89□□□□□ -0.83
CUX1-204ENST00000393824 IFITM10A6NMD0 228 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 TXNDC12O95881 172 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 SERPINA5P05154 406 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 FBXO45P0C2W1 286 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 CT62P0C5K7 136 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 HKR1P10072 659 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 RAB4AP20338 218 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 ADH6P28332 368 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 EMDP50402 254 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 RAB38P57729 211 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 RHEBQ15382 184 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 ZNHIT3Q15649 155 aaPredicted RBP9.88□□□□□ -0.83
CUX1-204ENST00000393824 NUP210LQ5VU65 1888 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 ASPHD2Q6ICH7 369 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 LEG1Q6P5S2 330 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 KIRREL2Q6UWL6 708 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 ZNF614Q8N883 585 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 OR56B1Q8NGI3 324 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 RNF128Q8TEB7 428 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 C4orf45Q96LM5 186 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 ULBP3Q9BZM4 244 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 FN3KRPQ9HA64 309 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 TAF9BQ9HBM6 251 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 OR2S2Q9NQN1 319 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 PISDQ9UG56 409 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 B3GALT1Q9Y5Z6 326 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 TMEM14AQ9Y6G1 99 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 PIEZO1Q92508 2521 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 A0A1B0GX78 115 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 ELOA3DA6NLF2 546 aaPredicted RBP9.88□□□□□ -0.83
CUX1-204ENST00000393824 AGPAT2O15120 278 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 PLGP00747 810 aaPredicted RBP9.88□□□□□ -0.83
CUX1-204ENST00000393824 CSN2P05814 226 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 EDN3P14138 238 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 ALOX5APP20292 161 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 HTR2CP28335 458 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 KIR3DL2P43630 455 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 CD81P60033 236 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 NHLH1Q02575 133 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 ELOA3BQ3SY89 546 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 EMC4Q5J8M3 183 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 ZNF385CQ66K41 422 aaPredicted RBP9.88□□□□□ -0.83
CUX1-204ENST00000393824 RHBDD2Q6NTF9 364 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 TMPPEQ6ZT21 453 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 ZAR1Q86SH2 424 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 ZNF440Q8IYI8 595 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 COMMD1Q8N668 190 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 PNLDC1Q8NA58 520 aaKnown RBP9.88□□□□□ -0.83
CUX1-204ENST00000393824 ADAD2Q8NCV1 583 aaKnown RBP9.88□□□□□ -0.83
CUX1-204ENST00000393824 ELOA3Q8NG57 546 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 OR1J1Q8NGS3 322 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 AQP3Q92482 292 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 TSLPQ969D9 159 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 PTX4Q96A99 478 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 MARS2Q96GW9 593 aaKnown RBP9.88□□□□□ -0.83
CUX1-204ENST00000393824 RGCCQ9H4X1 137 aa9.88□□□□□ -0.83
CUX1-204ENST00000393824 GFOD1Q9NXC2 390 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms