RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 TNK1Q13470 666 aa19.28■□□□□ 0.68
HMGA2-203ENST00000393578 CRIP3Q6Q6R5 217 aa19.28■□□□□ 0.68
HMGA2-203ENST00000393578 FAM214BQ7L5A3 538 aa19.28■□□□□ 0.68
HMGA2-203ENST00000393578 NPRL2Q8WTW4 380 aa19.28■□□□□ 0.68
HMGA2-203ENST00000393578 SPSB1Q96BD6 273 aa19.28■□□□□ 0.68
HMGA2-203ENST00000393578 SEH1LQ96EE3 360 aa19.28■□□□□ 0.68
HMGA2-203ENST00000393578 ACTR6Q9GZN1 396 aa19.28■□□□□ 0.68
HMGA2-203ENST00000393578 SSUH2Q9Y2M2 353 aa19.28■□□□□ 0.68
HMGA2-203ENST00000393578 TRAV6A0A075B6T7 132 aa19.27■□□□□ 0.68
HMGA2-203ENST00000393578 hCG_38984A0A1B0GV85 526 aa19.27■□□□□ 0.68
HMGA2-203ENST00000393578 EDN3P14138 238 aa19.27■□□□□ 0.68
HMGA2-203ENST00000393578 FAUP35544 74 aaKnown RBP19.27■□□□□ 0.68
HMGA2-203ENST00000393578 ACTBP60709 375 aa19.27■□□□□ 0.68
HMGA2-203ENST00000393578 ACTG1P63261 375 aa19.27■□□□□ 0.68
HMGA2-203ENST00000393578 FAM3AP98173 230 aa19.27■□□□□ 0.68
HMGA2-203ENST00000393578 GUSBP1Q15486 140 aa19.27■□□□□ 0.68
HMGA2-203ENST00000393578 OR8B8Q15620 311 aa19.27■□□□□ 0.68
HMGA2-203ENST00000393578 FAM189A2Q15884 450 aa19.27■□□□□ 0.68
HMGA2-203ENST00000393578 TMEM255AQ5JRV8 349 aa19.27■□□□□ 0.68
HMGA2-203ENST00000393578 BCL2L2Q92843 193 aaPredicted RBP19.27■□□□□ 0.68
HMGA2-203ENST00000393578 NOX3Q9HBY0 568 aa19.27■□□□□ 0.68
HMGA2-203ENST00000393578 MED12LQ86YW9 2145 aa19.27■□□□□ 0.67
HMGA2-203ENST00000393578 OR14I1A6ND48 311 aa19.26■□□□□ 0.67
HMGA2-203ENST00000393578 NAT2P11245 290 aa19.26■□□□□ 0.67
HMGA2-203ENST00000393578 PLP2Q04941 152 aa19.26■□□□□ 0.67
HMGA2-203ENST00000393578 DMRTC1Q5HYR2 192 aa19.26■□□□□ 0.67
HMGA2-203ENST00000393578 SFRP4Q6FHJ7 346 aaPredicted RBP19.26■□□□□ 0.67
HMGA2-203ENST00000393578 OR5M9Q8NGP3 310 aa19.26■□□□□ 0.67
HMGA2-203ENST00000393578 AQP3Q92482 292 aa19.26■□□□□ 0.67
HMGA2-203ENST00000393578 WNT2BQ93097 391 aa19.26■□□□□ 0.67
HMGA2-203ENST00000393578 SCNM1Q9BWG6 230 aa19.26■□□□□ 0.67
HMGA2-203ENST00000393578 NEK6Q9HC98 313 aa19.26■□□□□ 0.67
HMGA2-203ENST00000393578 C5orf49A4QMS7 147 aa19.26■□□□□ 0.67
HMGA2-203ENST00000393578 ZNHIT1O43257 154 aa19.26■□□□□ 0.67
HMGA2-203ENST00000393578 CDC14BO60729 498 aa19.26■□□□□ 0.67
HMGA2-203ENST00000393578 CHRM2P08172 466 aa19.26■□□□□ 0.67
HMGA2-203ENST00000393578 PSMB1P20618 241 aaKnown RBP19.26■□□□□ 0.67
HMGA2-203ENST00000393578 EIF2S3P41091 472 aaKnown RBP19.26■□□□□ 0.67
HMGA2-203ENST00000393578 TBRG1Q3YBR2 411 aa19.26■□□□□ 0.67
HMGA2-203ENST00000393578 ZNF260Q3ZCT1 412 aa19.26■□□□□ 0.67
HMGA2-203ENST00000393578 TMEM42Q69YG0 159 aa19.26■□□□□ 0.67
HMGA2-203ENST00000393578 TFAP2EQ6VUC0 442 aa19.26■□□□□ 0.67
HMGA2-203ENST00000393578 TMEM104Q8NE00 496 aa19.26■□□□□ 0.67
HMGA2-203ENST00000393578 OR56B4Q8NH76 319 aa19.26■□□□□ 0.67
HMGA2-203ENST00000393578 NANOS1Q8WY41 292 aaKnown RBP19.26■□□□□ 0.67
HMGA2-203ENST00000393578 LPAR5Q9H1C0 372 aa19.26■□□□□ 0.67
HMGA2-203ENST00000393578 GPR173Q9NS66 373 aa19.26■□□□□ 0.67
HMGA2-203ENST00000393578 MCUBQ9NWR8 336 aa19.26■□□□□ 0.67
HMGA2-203ENST00000393578 PRRC2CQ9Y520 2896 aaKnown RBP19.25■□□□□ 0.67
HMGA2-203ENST00000393578 AHRRA9YTQ3 701 aa19.25■□□□□ 0.67
HMGA2-203ENST00000393578 GFRA3O60609 400 aa19.25■□□□□ 0.67
HMGA2-203ENST00000393578 PDGFAP04085 211 aa19.25■□□□□ 0.67
HMGA2-203ENST00000393578 H2AFB2P0C5Z0 115 aa19.25■□□□□ 0.67
HMGA2-203ENST00000393578 CNN3Q15417 329 aaKnown RBP19.25■□□□□ 0.67
HMGA2-203ENST00000393578 HIKESHIQ53FT3 197 aa19.25■□□□□ 0.67
HMGA2-203ENST00000393578 CLVS2Q5SYC1 327 aa19.25■□□□□ 0.67
HMGA2-203ENST00000393578 GCNT2Q8N0V5 402 aa19.25■□□□□ 0.67
HMGA2-203ENST00000393578 PIGTQ969N2 578 aa19.25■□□□□ 0.67
HMGA2-203ENST00000393578 CPNE2Q96FN4 548 aaPredicted RBP19.25■□□□□ 0.67
HMGA2-203ENST00000393578 CST11Q9H112 138 aa19.25■□□□□ 0.67
HMGA2-203ENST00000393578 CCNOP22674 350 aa19.24■□□□□ 0.67
HMGA2-203ENST00000393578 PRKACBP22694 351 aa19.24■□□□□ 0.67
HMGA2-203ENST00000393578 VEGFCP49767 419 aa19.24■□□□□ 0.67
HMGA2-203ENST00000393578 CDH24Q86UP0 819 aa19.24■□□□□ 0.67
HMGA2-203ENST00000393578 OR10R2Q8NGX6 335 aa19.24■□□□□ 0.67
HMGA2-203ENST00000393578 ST6GAL2Q96JF0 529 aa19.24■□□□□ 0.67
HMGA2-203ENST00000393578 RNF170Q96K19 258 aa19.24■□□□□ 0.67
HMGA2-203ENST00000393578 POM121L2Q96KW2 1035 aa19.24■□□□□ 0.67
HMGA2-203ENST00000393578 TMEM59Q9BXS4 323 aa19.24■□□□□ 0.67
HMGA2-203ENST00000393578 ZMAT3Q9HA38 289 aaKnown RBP19.24■□□□□ 0.67
HMGA2-203ENST00000393578 ZNF221Q9UK13 617 aa19.24■□□□□ 0.67
HMGA2-203ENST00000393578 MEIS3P1A6NDR6 274 aa19.24■□□□□ 0.67
HMGA2-203ENST00000393578 TMEM235A6NFC5 223 aa19.24■□□□□ 0.67
HMGA2-203ENST00000393578 WIPF3A6NGB9 483 aa19.24■□□□□ 0.67
HMGA2-203ENST00000393578 MPIG6BO95866 241 aa19.24■□□□□ 0.67
HMGA2-203ENST00000393578 MELTFP08582 738 aa19.24■□□□□ 0.67
HMGA2-203ENST00000393578 GTF2F2P13984 249 aa19.24■□□□□ 0.67
HMGA2-203ENST00000393578 TGFBR3Q03167 851 aa19.24■□□□□ 0.67
HMGA2-203ENST00000393578 GSG1Q2KHT4 349 aa19.24■□□□□ 0.67
HMGA2-203ENST00000393578 CDNFQ49AH0 187 aa19.24■□□□□ 0.67
HMGA2-203ENST00000393578 ZBTB37Q5TC79 503 aa19.24■□□□□ 0.67
HMGA2-203ENST00000393578 Q6ZTK2 550 aa19.24■□□□□ 0.67
HMGA2-203ENST00000393578 ZNF584Q8IVC4 421 aa19.24■□□□□ 0.67
HMGA2-203ENST00000393578 CHST4Q8NCG5 386 aa19.24■□□□□ 0.67
HMGA2-203ENST00000393578 OR5D18Q8NGL1 313 aa19.24■□□□□ 0.67
HMGA2-203ENST00000393578 TNFAIP8L1Q8WVP5 186 aa19.24■□□□□ 0.67
HMGA2-203ENST00000393578 APOBEC3DQ96AK3 386 aaPredicted RBP19.24■□□□□ 0.67
HMGA2-203ENST00000393578 C20orf85Q9H1P6 137 aa19.24■□□□□ 0.67
HMGA2-203ENST00000393578 C7orf66A4D0T2 115 aa19.23■□□□□ 0.67
HMGA2-203ENST00000393578 CRTAPO75718 401 aaPredicted RBP19.23■□□□□ 0.67
HMGA2-203ENST00000393578 CNOT4O95628 575 aaKnown RBP19.23■□□□□ 0.67
HMGA2-203ENST00000393578 NRASP01111 189 aa19.23■□□□□ 0.67
HMGA2-203ENST00000393578 AKAIN1P0CW23 69 aa19.23■□□□□ 0.67
HMGA2-203ENST00000393578 MTCP1P56278 107 aa19.23■□□□□ 0.67
HMGA2-203ENST00000393578 ACSF3Q4G176 576 aaPredicted RBP19.23■□□□□ 0.67
HMGA2-203ENST00000393578 SLC22A6Q4U2R8 563 aa19.23■□□□□ 0.67
HMGA2-203ENST00000393578 OR2A2Q6IF42 318 aa19.23■□□□□ 0.67
HMGA2-203ENST00000393578 RPUSD3Q6P087 351 aaKnown RBP19.23■□□□□ 0.67
HMGA2-203ENST00000393578 RBMXL3Q8N7X1 1067 aaKnown RBP19.23■□□□□ 0.67
HMGA2-203ENST00000393578 CMBLQ96DG6 245 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms