RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 CD3GP09693 182 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 GLI4P10075 376 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 TIMP3P35625 211 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 OR3A4PP47883 348 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 CAPZA1P52907 286 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 TAS2R20P59543 309 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 DGCR2P98153 550 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 PMPCAQ10713 525 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 ASAH1Q13510 395 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 HLXQ14774 488 aaPredicted RBP7.48□□□□□ -1.21
TDP1-203ENST00000393454 MYO7BQ6PIF6 2116 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 GLIPR1L1Q6UWM5 242 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 COLCA1Q6ZS62 124 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 BHLHA15Q7RTS1 189 aaPredicted RBP7.48□□□□□ -1.21
TDP1-203ENST00000393454 LYPD6Q86Y78 171 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 DOLPP1Q86YN1 238 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 GABRG1Q8N1C3 465 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 PAQR4Q8N4S7 273 aaPredicted RBP7.48□□□□□ -1.21
TDP1-203ENST00000393454 OR5D18Q8NGL1 313 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 PIGCQ92535 297 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 GCDHQ92947 438 aaPredicted RBP7.48□□□□□ -1.21
TDP1-203ENST00000393454 FAM46BQ96A09 425 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 C11orf54Q9H0W9 315 aaPredicted RBP7.48□□□□□ -1.21
TDP1-203ENST00000393454 CDH20Q9HBT6 801 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 TUBD1Q9UJT1 453 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 ING4Q9UNL4 249 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 STARD10Q9Y365 291 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 TLN1Q9Y490 2541 aaKnown RBP7.48□□□□□ -1.21
TDP1-203ENST00000393454 FAM230AA0A1W2PPH8 454 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 XRCC3O43542 346 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 GMDSO60547 372 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 NRASP01111 189 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 HLA-DQB1P01920 261 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 PTHLHP12272 177 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 HOXB1P14653 301 aaPredicted RBP7.48□□□□□ -1.21
TDP1-203ENST00000393454 COX5AP20674 150 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 RANBP1P43487 201 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 PTH2RP49190 550 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 MMP15P51511 669 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 RBPJQ06330 500 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 MRPL49Q13405 166 aaKnown RBP7.48□□□□□ -1.21
TDP1-203ENST00000393454 TNK1Q13470 666 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 GK2Q14410 553 aaPredicted RBP7.48□□□□□ -1.21
TDP1-203ENST00000393454 P2RY6Q15077 328 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 CNN3Q15417 329 aaKnown RBP7.48□□□□□ -1.21
TDP1-203ENST00000393454 KISS1Q15726 138 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 CLVS2Q5SYC1 327 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 MZT2BQ6NZ67 158 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 CCBE1Q6UXH8 406 aaPredicted RBP7.48□□□□□ -1.21
TDP1-203ENST00000393454 MOB3CQ70IA8 216 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 KRT74Q7RTS7 529 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 NRARPQ7Z6K4 114 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 CDH26Q8IXH8 852 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 C1orf162Q8NEQ5 155 aaPredicted RBP7.48□□□□□ -1.21
TDP1-203ENST00000393454 C15orf40Q8WUR7 153 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 FCAMRQ8WWV6 532 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 S100A13Q99584 98 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 SLX1AQ9BQ83 275 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 SLC22A4Q9H015 551 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 NEK6Q9HC98 313 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 EIF3KQ9UBQ5 218 aaKnown RBP7.48□□□□□ -1.21
TDP1-203ENST00000393454 TINAGQ9UJW2 476 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 RAB22AQ9UL26 194 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 SPENQ96T58 3664 aaKnown RBP7.48□□□□□ -1.21
TDP1-203ENST00000393454 ZNF816-ZNF321PA0A0X1KG74 233 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 METTL21EPA6NDL7 271 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 CTDSPLO15194 276 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 PLA2G10O15496 165 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 SSX4O60224 188 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 KDM4BO94953 1096 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 PRF1P14222 555 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 ZNF14P17017 642 aaPredicted RBP7.47□□□□□ -1.21
TDP1-203ENST00000393454 PRKACBP22694 351 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 IL32P24001 234 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 CEACAM8P31997 349 aaPredicted RBP7.47□□□□□ -1.21
TDP1-203ENST00000393454 WNT5AP41221 380 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 SRP9P49458 86 aaKnown RBP7.47□□□□□ -1.21
TDP1-203ENST00000393454 MTCP1P56278 107 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 OR8B8Q15620 311 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 PLCXD3Q63HM9 321 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 ALKBH2Q6NS38 261 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 WDR31Q8NA23 367 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 OR56B2PQ8NGI1 322 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 OR5L1Q8NGL2 311 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 ENKURQ8TC29 256 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 TNFAIP8L1Q8WVP5 186 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 YIPF5Q969M3 257 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 ITFG2Q969R8 447 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 SPSB4Q96A44 273 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 SFXN3Q9BWM7 321 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 POFUT1Q9H488 388 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 AUNIPQ9H7T9 357 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 ELL3Q9HB65 397 aaPredicted RBP7.47□□□□□ -1.21
TDP1-203ENST00000393454 FAIMQ9NVQ4 179 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 KCNN3Q9UGI6 736 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 SLC7A11Q9UPY5 501 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 RHBDD3Q9Y3P4 386 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 ZNF850A8MQ14 1090 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 GABARAPH6UMI1 98 aa7.47□□□□□ -1.21
TDP1-203ENST00000393454 LDLRAD4O15165 306 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms