RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 SLC51BQ86UW2 128 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 OR2AE1Q8NHA4 323 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 HAS2Q92819 552 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 ZNF416Q9BWM5 594 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 GCM1Q9NP62 436 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 FLVCR1Q9Y5Y0 555 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 A0A1B0GUH1 482 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 IL3RAP26951 378 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 FCGR2CP31995 323 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 FUT5Q11128 374 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 PDLIM3Q53GG5 364 aaPredicted RBP14.78□□□□□ -0.04
SCN3B-202ENST00000392770 PABPC1L2AQ5JQF8 200 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 OR2M3Q8NG83 312 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 WDFY2Q96P53 400 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 MEIKINA0A087WXM9 373 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 TRIM64BA6NI03 449 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 IGHA1P01876 353 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 SEMG1P04279 462 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 DEGS2Q6QHC5 323 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 OR51A4Q8NGJ6 313 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 SEH1LQ96EE3 360 aa14.78□□□□□ -0.04
SCN3B-202ENST00000392770 GAB4Q2WGN9 574 aa14.77□□□□□ -0.04
SCN3B-202ENST00000392770 SLC25A30Q5SVS4 291 aa14.77□□□□□ -0.04
SCN3B-202ENST00000392770 ZNF808Q8N4W9 903 aaPredicted RBP14.77□□□□□ -0.04
SCN3B-202ENST00000392770 DEFB108BQ8NET1 73 aa14.77□□□□□ -0.04
SCN3B-202ENST00000392770 PTP4A1Q93096 173 aa14.77□□□□□ -0.04
SCN3B-202ENST00000392770 RBMXL1Q96E39 390 aaKnown RBP14.77□□□□□ -0.04
SCN3B-202ENST00000392770 ANK1P16157 1881 aa14.77□□□□□ -0.04
SCN3B-202ENST00000392770 MAGEA5P43359 124 aa14.77□□□□□ -0.04
SCN3B-202ENST00000392770 SNRPNP63162 240 aaKnown RBP14.77□□□□□ -0.04
SCN3B-202ENST00000392770 DMKNQ6E0U4 476 aaPredicted RBP14.77□□□□□ -0.05
SCN3B-202ENST00000392770 MFSD4AQ8N468 514 aa14.77□□□□□ -0.05
SCN3B-202ENST00000392770 OR52B4Q8NGK2 314 aa14.77□□□□□ -0.05
SCN3B-202ENST00000392770 FAM213BQ8TBF2 198 aa14.77□□□□□ -0.05
SCN3B-202ENST00000392770 PILRBQ9UKJ0 227 aa14.77□□□□□ -0.05
SCN3B-202ENST00000392770 HNF4GQ14541 408 aa14.77□□□□□ -0.05
SCN3B-202ENST00000392770 OR4S1Q8NGB4 309 aa14.77□□□□□ -0.05
SCN3B-202ENST00000392770 PTHLHP12272 177 aa14.76□□□□□ -0.05
SCN3B-202ENST00000392770 LINC00303Q3SY05 128 aa14.76□□□□□ -0.05
SCN3B-202ENST00000392770 OR52W1Q6IF63 320 aa14.76□□□□□ -0.05
SCN3B-202ENST00000392770 FAM109AQ8N4B1 249 aa14.76□□□□□ -0.05
SCN3B-202ENST00000392770 SLC30A7Q8NEW0 376 aa14.76□□□□□ -0.05
SCN3B-202ENST00000392770 OR5H8P0DN80 308 aa14.76□□□□□ -0.05
SCN3B-202ENST00000392770 GLI4P10075 376 aa14.76□□□□□ -0.05
SCN3B-202ENST00000392770 RAC3P60763 192 aa14.76□□□□□ -0.05
SCN3B-202ENST00000392770 AKR1C1Q04828 323 aa14.76□□□□□ -0.05
SCN3B-202ENST00000392770 KISS1Q15726 138 aa14.76□□□□□ -0.05
SCN3B-202ENST00000392770 OR2W3Q7Z3T1 314 aa14.76□□□□□ -0.05
SCN3B-202ENST00000392770 PXT1Q8NFP0 134 aa14.76□□□□□ -0.05
SCN3B-202ENST00000392770 SPSB1Q96BD6 273 aa14.76□□□□□ -0.05
SCN3B-202ENST00000392770 UQCC2Q9BRT2 126 aa14.76□□□□□ -0.05
SCN3B-202ENST00000392770 PLK3Q9H4B4 646 aa14.76□□□□□ -0.05
SCN3B-202ENST00000392770 PRDM6Q9NQX0 595 aa14.76□□□□□ -0.05
SCN3B-202ENST00000392770 SLC17A5Q9NRA2 495 aa14.76□□□□□ -0.05
SCN3B-202ENST00000392770 NYNRINQ9P2P1 1898 aaKnown RBP14.76□□□□□ -0.05
SCN3B-202ENST00000392770 ZNF646O15015 1829 aaPredicted RBP14.76□□□□□ -0.05
SCN3B-202ENST00000392770 SOX8P57073 446 aa14.76□□□□□ -0.05
SCN3B-202ENST00000392770 H2BFWTQ7Z2G1 175 aa14.76□□□□□ -0.05
SCN3B-202ENST00000392770 S100PBPQ96BU1 408 aa14.76□□□□□ -0.05
SCN3B-202ENST00000392770 ADAT1Q9BUB4 502 aaKnown RBP14.76□□□□□ -0.05
SCN3B-202ENST00000392770 ZNF275Q9NSD4 429 aaPredicted RBP14.76□□□□□ -0.05
SCN3B-202ENST00000392770 OR5V1Q9UGF6 321 aa14.76□□□□□ -0.05
SCN3B-202ENST00000392770 SPAARA0A1B0GVQ0 90 aa14.76□□□□□ -0.05
SCN3B-202ENST00000392770 CTSBP07858 339 aa14.76□□□□□ -0.05
SCN3B-202ENST00000392770 PATE4P0C8F1 98 aa14.76□□□□□ -0.05
SCN3B-202ENST00000392770 C3AR1Q16581 482 aa14.76□□□□□ -0.05
SCN3B-202ENST00000392770 ZNF529Q6P280 563 aa14.76□□□□□ -0.05
SCN3B-202ENST00000392770 CYB5BO43169 146 aa14.76□□□□□ -0.05
SCN3B-202ENST00000392770 CCL2P13500 99 aa14.76□□□□□ -0.05
SCN3B-202ENST00000392770 OR3A4PP47883 348 aa14.76□□□□□ -0.05
SCN3B-202ENST00000392770 AQP7P3A6NL99 342 aa14.75□□□□□ -0.05
SCN3B-202ENST00000392770 SNCAP37840 140 aa14.75□□□□□ -0.05
SCN3B-202ENST00000392770 MLF1P58340 268 aa14.75□□□□□ -0.05
SCN3B-202ENST00000392770 RAB11AP62491 216 aa14.75□□□□□ -0.05
SCN3B-202ENST00000392770 RNF141Q8WVD5 230 aa14.75□□□□□ -0.05
SCN3B-202ENST00000392770 USB1Q9BQ65 265 aaKnown RBP14.75□□□□□ -0.05
SCN3B-202ENST00000392770 SERPINE3A8MV23 424 aa14.75□□□□□ -0.05
SCN3B-202ENST00000392770 FXNQ16595 210 aa14.75□□□□□ -0.05
SCN3B-202ENST00000392770 LYG2Q86SG7 212 aa14.75□□□□□ -0.05
SCN3B-202ENST00000392770 SLC35G3Q8N808 338 aa14.75□□□□□ -0.05
SCN3B-202ENST00000392770 A0A1W2PPC1 479 aa14.75□□□□□ -0.05
SCN3B-202ENST00000392770 PDGFBP01127 241 aaPredicted RBP14.75□□□□□ -0.05
SCN3B-202ENST00000392770 CCDC71Q8IV32 467 aaPredicted RBP14.75□□□□□ -0.05
SCN3B-202ENST00000392770 NDRG3Q9UGV2 375 aa14.75□□□□□ -0.05
SCN3B-202ENST00000392770 GCM2O75603 506 aaPredicted RBP14.75□□□□□ -0.05
SCN3B-202ENST00000392770 CSF2RBP32927 897 aa14.75□□□□□ -0.05
SCN3B-202ENST00000392770 ZNF92Q03936 586 aa14.75□□□□□ -0.05
SCN3B-202ENST00000392770 ZNF266Q14584 549 aa14.75□□□□□ -0.05
SCN3B-202ENST00000392770 PRRX2Q99811 253 aa14.75□□□□□ -0.05
SCN3B-202ENST00000392770 SNRPGP15A8MWD9 76 aa14.75□□□□□ -0.05
SCN3B-202ENST00000392770 OGG1O15527 345 aa14.75□□□□□ -0.05
SCN3B-202ENST00000392770 NKX2-1P43699 371 aaPredicted RBP14.75□□□□□ -0.05
SCN3B-202ENST00000392770 IRF3Q14653 427 aa14.75□□□□□ -0.05
SCN3B-202ENST00000392770 SAP25Q8TEE9 199 aa14.75□□□□□ -0.05
SCN3B-202ENST00000392770 FRRS1LQ9P0K9 344 aa14.75□□□□□ -0.05
SCN3B-202ENST00000392770 A0A0U1RQK1 487 aa14.74□□□□□ -0.05
SCN3B-202ENST00000392770 OR8U8P0C7N1 319 aa14.74□□□□□ -0.05
SCN3B-202ENST00000392770 LIFP15018 202 aa14.74□□□□□ -0.05
SCN3B-202ENST00000392770 TLE4Q04727 773 aa14.74□□□□□ -0.05
SCN3B-202ENST00000392770 MRGPREQ86SM8 312 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms