RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 POM121L2Q96KW2 1035 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 SPACA5Q96QH8 159 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 NLKQ9UBE8 527 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 MRPS28Q9Y2Q9 187 aaKnown RBP9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 BOD1L1Q8NFC6 3051 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 C5orf49A4QMS7 147 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 METTL21EPA6NDL7 271 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 MBD3L4A6NDZ8 208 aaPredicted RBP9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 MBD3L3A6NE82 208 aaPredicted RBP9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 MBD3L5A6NJ08 208 aaPredicted RBP9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 HNRNPCP07910 306 aaKnown RBP eCLIP9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 UBBP0CG47 229 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 PTHLHP12272 177 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 IGHV1-2P23083 117 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 ALDH3B1P43353 468 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 OR3A4PP47883 348 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 GSK3AP49840 483 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 ZNF92Q03936 586 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 KISS1Q15726 138 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 TBR1Q16650 682 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 PLA1AQ53H76 456 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 TMEM42Q69YG0 159 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 OR10K2Q6IF99 312 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 RAB12Q6IQ22 244 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 ZNF585AQ6P3V2 769 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 CRIP3Q6Q6R5 217 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 GLIPR1L1Q6UWM5 242 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 ZNF584Q8IVC4 421 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 CCDC36Q8IYA8 594 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 PNLDC1Q8NA58 520 aaKnown RBP9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 MBD3L2Q8NHZ7 208 aaPredicted RBP9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 C1orf147Q96MC9 270 aaPredicted RBP9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 MARVELD1Q9BSK0 173 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 NPAP1Q9NZP6 1156 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 MYO7BQ6PIF6 2116 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 SPENQ96T58 3664 aaKnown RBP9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 MEIOCA2RUB1 952 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 FAM25EA8MYX2 175 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 SCGNO76038 276 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 GSTT2BP0CG30 244 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 KRTCAP3Q53RY4 240 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 ZBTB37Q5TC79 503 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 AGAP6Q5VW22 663 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 GLCCI1Q86VQ1 547 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 CNEP1R1Q8N9A8 125 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 DEDD2Q8WXF8 326 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 APOBEC3DQ96AK3 386 aaPredicted RBP9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 CREB3L1Q96BA8 519 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 SPSB1Q96BD6 273 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 BOD1Q96IK1 185 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 GPER1Q99527 375 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 NUDT16L1Q9BRJ7 211 aaKnown RBP9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 MYEF2Q9P2K5 600 aaKnown RBP9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 GHRLQ9UBU3 117 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 KLK11Q9UBX7 282 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 TP53TG5Q9Y2B4 290 aa9.93□□□□□ -0.82
SMARCAL1-203ENST00000392128 ACACAQ13085 2346 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 ANKRD20A5PA0PJZ0 165 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 H7C417 338 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 SULT1C2O00338 296 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 PTGER4P35408 488 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 SSBP1Q04837 148 aaKnown RBP9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 SNTB2Q13425 540 aaKnown RBP9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 CNN3Q15417 329 aaKnown RBP9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 CLVS2Q5SYC1 327 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 ZNF101Q8IZC7 436 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 KCNG3Q8TAE7 436 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 FAM46BQ96A09 425 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 UPRTQ96BW1 309 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 ZNF75AQ96N20 296 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 NEK6Q9HC98 313 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 PLSCR4Q9NRQ2 329 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 COPZ2Q9P299 210 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 MTFP1Q9UDX5 166 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 NAP1L6A6NFF2 107 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 RAB27BO00194 218 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 DLL1O00548 723 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 GMDSO60547 372 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 WDR1O75083 606 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 SERPINA5P05154 406 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 HOXB1P14653 301 aaPredicted RBP9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 COX5AP20674 150 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 CCNOP22674 350 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 PRKACBP22694 351 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 PRSS3P35030 304 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 APLNRP35414 380 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 PTGFRP43088 359 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 VWA1Q6PCB0 445 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 FAM180AQ6UWF9 173 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 MDP1Q86V88 176 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 C1orf162Q8NEQ5 155 aaPredicted RBP9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 CPNE2Q96FN4 548 aaPredicted RBP9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 TECTBQ96PL2 329 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 REPIN1Q9BWE0 567 aaKnown RBP9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 DPAGT1Q9H3H5 408 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 SCPEP1Q9HB40 452 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 GPR173Q9NS66 373 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 TAS2R8Q9NYW2 309 aa9.92□□□□□ -0.82
SMARCAL1-203ENST00000392128 RBBP9O75884 186 aa9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 TNFSF13O75888 250 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms