RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 ZNF727A8MUV8 499 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 SFT2D2O95562 160 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 SLC35A1P78382 337 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 TGIF1Q15583 401 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 ZNF528Q3MIS6 628 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 GRINAQ7Z429 371 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 DTWD2Q8NBA8 298 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 TMEM52Q8NDY8 209 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 OR52N4Q8NGI2 321 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 RTN4IP1Q8WWV3 396 aaPredicted RBP12.78□□□□□ -0.36
RTF1-201ENST00000389629 RAB18Q9NP72 206 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 ZNF275Q9NSD4 429 aaPredicted RBP12.78□□□□□ -0.36
RTF1-201ENST00000389629 ALKBH4Q9NXW9 302 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 H7BYZ3 331 aa12.77□□□□□ -0.36
RTF1-201ENST00000389629 HRKO00198 91 aa12.77□□□□□ -0.36
RTF1-201ENST00000389629 MPZL1O95297 269 aa12.77□□□□□ -0.36
RTF1-201ENST00000389629 EML2O95834 649 aa12.77□□□□□ -0.36
RTF1-201ENST00000389629 PPICP45877 212 aa12.77□□□□□ -0.36
RTF1-201ENST00000389629 ARRDC1Q8N5I2 433 aa12.77□□□□□ -0.36
RTF1-201ENST00000389629 OR5L2Q8NGL0 311 aa12.77□□□□□ -0.36
RTF1-201ENST00000389629 GPX8Q8TED1 209 aa12.77□□□□□ -0.36
RTF1-201ENST00000389629 KISS1RQ969F8 398 aaPredicted RBP12.77□□□□□ -0.36
RTF1-201ENST00000389629 ARHGAP5-AS1Q96IT6 56 aa12.77□□□□□ -0.36
RTF1-201ENST00000389629 PBOV1Q9GZY1 135 aa12.77□□□□□ -0.36
RTF1-201ENST00000389629 CNTD2Q9H8S5 307 aa12.77□□□□□ -0.36
RTF1-201ENST00000389629 KLHDC2Q9Y2U9 406 aa12.77□□□□□ -0.36
RTF1-201ENST00000389629 LINC01553A4QN01 128 aa12.77□□□□□ -0.37
RTF1-201ENST00000389629 GPR137BO60478 399 aa12.77□□□□□ -0.37
RTF1-201ENST00000389629 ZNF345Q14585 488 aa12.77□□□□□ -0.37
RTF1-201ENST00000389629 TMEM176BQ3YBM2 270 aaPredicted RBP12.77□□□□□ -0.37
RTF1-201ENST00000389629 CLEC18BQ6UXF7 455 aa12.77□□□□□ -0.37
RTF1-201ENST00000389629 SLC25A42Q86VD7 318 aa12.77□□□□□ -0.37
RTF1-201ENST00000389629 LRRC3BQ96PB8 259 aa12.77□□□□□ -0.37
RTF1-201ENST00000389629 NECAP2Q9NVZ3 263 aa12.77□□□□□ -0.37
RTF1-201ENST00000389629 TMEM268Q5VZI3 342 aa12.77□□□□□ -0.37
RTF1-201ENST00000389629 GGNBP1Q5YKI7 109 aa12.77□□□□□ -0.37
RTF1-201ENST00000389629 JMJD6Q6NYC1 403 aaPredicted RBP12.77□□□□□ -0.37
RTF1-201ENST00000389629 H1FNTQ75WM6 255 aaPredicted RBP12.77□□□□□ -0.37
RTF1-201ENST00000389629 RPUSD4Q96CM3 377 aaKnown RBP12.77□□□□□ -0.37
RTF1-201ENST00000389629 RHOVQ96L33 236 aa12.77□□□□□ -0.37
RTF1-201ENST00000389629 LAT2Q9GZY6 243 aa12.77□□□□□ -0.37
RTF1-201ENST00000389629 LOC285556D6RIA3 1793 aa12.77□□□□□ -0.37
RTF1-201ENST00000389629 OR2M5A3KFT3 312 aa12.77□□□□□ -0.37
RTF1-201ENST00000389629 TP53I11O14683 189 aa12.77□□□□□ -0.37
RTF1-201ENST00000389629 PLRG1O43660 514 aaKnown RBP12.77□□□□□ -0.37
RTF1-201ENST00000389629 GAS1P54826 345 aa12.77□□□□□ -0.37
RTF1-201ENST00000389629 SLC37A1P57057 533 aa12.77□□□□□ -0.37
RTF1-201ENST00000389629 RPS15P62841 145 aaKnown RBP12.77□□□□□ -0.37
RTF1-201ENST00000389629 FMODQ06828 376 aa12.77□□□□□ -0.37
RTF1-201ENST00000389629 KCNIP4Q6PIL6 250 aa12.77□□□□□ -0.37
RTF1-201ENST00000389629 PARM1Q6UWI2 310 aa12.77□□□□□ -0.37
RTF1-201ENST00000389629 MOB3CQ70IA8 216 aa12.77□□□□□ -0.37
RTF1-201ENST00000389629 PLXDC1Q8IUK5 500 aa12.77□□□□□ -0.37
RTF1-201ENST00000389629 OR51F2Q8NH61 342 aa12.77□□□□□ -0.37
RTF1-201ENST00000389629 TVP23CQ96ET8 276 aa12.77□□□□□ -0.37
RTF1-201ENST00000389629 LAMP3Q9UQV4 416 aa12.77□□□□□ -0.37
RTF1-201ENST00000389629 RP1L1Q8IWN7 2480 aaPredicted RBP12.76□□□□□ -0.37
RTF1-201ENST00000389629 IGHV3-20A0A0C4DH32 117 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 H3BP45 60 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 TBX6O95947 436 aaPredicted RBP12.76□□□□□ -0.37
RTF1-201ENST00000389629 ERGP11308 486 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 TNFRSF4P43489 277 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 FASLGP48023 281 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 PHF19Q5T6S3 580 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 PLCXD3Q63HM9 321 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 NINJ1Q92982 152 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 PIGLQ9Y2B2 252 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 TET1Q8NFU7 2136 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 A0A1W2PPQ1 181 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 OTOL1A6NHN0 477 aaPredicted RBP12.76□□□□□ -0.37
RTF1-201ENST00000389629 C4orf47A7E2U8 309 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 SCAND1P57086 179 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 POLR2GP62487 172 aaKnown RBP eCLIP12.76□□□□□ -0.37
RTF1-201ENST00000389629 MFAP5Q13361 173 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 Q3ZCU0 254 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 KCNE5Q9UJ90 142 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 TNFRSF10CO14798 259 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 EIF4E2O60573 245 aaKnown RBP12.76□□□□□ -0.37
RTF1-201ENST00000389629 MOSPD3O75425 235 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 MPGP29372 298 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 SSTP61278 116 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 PPP1CAP62136 330 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 SKP2Q13309 424 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 FAM53BQ14153 422 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 PCK2Q16822 640 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 ZNF646O15015 1829 aaPredicted RBP12.76□□□□□ -0.37
RTF1-201ENST00000389629 ACAA2P42765 397 aaKnown RBP12.76□□□□□ -0.37
RTF1-201ENST00000389629 CLDN17P56750 224 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 TLE1Q04724 770 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 THNSL2Q86YJ6 484 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 SLC38A9Q8NBW4 561 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 ROBO4Q8WZ75 1007 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 OR51M1Q9H341 326 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 C19orf25Q9UFG5 118 aaPredicted RBP12.76□□□□□ -0.37
RTF1-201ENST00000389629 WSB1Q9Y6I7 421 aa12.76□□□□□ -0.37
RTF1-201ENST00000389629 HLA-HP01893 362 aa12.75□□□□□ -0.37
RTF1-201ENST00000389629 GSTP1P09211 210 aaKnown RBP12.75□□□□□ -0.37
RTF1-201ENST00000389629 HSF1Q00613 529 aa12.75□□□□□ -0.37
RTF1-201ENST00000389629 MESTQ5EB52 335 aa12.75□□□□□ -0.37
RTF1-201ENST00000389629 LIN37Q96GY3 246 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms