RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 DHHO43323 396 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 RBBP9O75884 186 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 TMIGD3P0DMS9 266 aaPredicted RBP10.91□□□□□ -0.66
CIITA-202ENST00000381835 OR8G3PP0DMU2 310 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 VSIG10L2P0DP72 767 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 FCGR2AP12318 317 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 PPP3CBP16298 524 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 MAPK3P27361 379 aaPredicted RBP10.91□□□□□ -0.66
CIITA-202ENST00000381835 SGCAQ16586 387 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 PCGF3Q3KNV8 242 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 Q499Y3 187 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 SLC18B1Q6NT16 456 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 TMEM45BQ96B21 275 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 MNTQ99583 582 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 ARL6Q9H0F7 186 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 PARPBPQ9NWS1 579 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 CLCF1Q9UBD9 225 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 TUBD1Q9UJT1 453 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 POLR1DQ9Y2S0 133 aa10.91□□□□□ -0.66
CIITA-202ENST00000381835 FXYD6-FXYD2A0A087WZ82 144 aa10.9□□□□□ -0.66
CIITA-202ENST00000381835 HMSDA8MTL9 139 aa10.9□□□□□ -0.66
CIITA-202ENST00000381835 ZNF724A8MTY0 619 aa10.9□□□□□ -0.66
CIITA-202ENST00000381835 RLN1P04808 185 aa10.9□□□□□ -0.66
CIITA-202ENST00000381835 LPLP06858 475 aa10.9□□□□□ -0.66
CIITA-202ENST00000381835 IL32P24001 234 aa10.9□□□□□ -0.66
CIITA-202ENST00000381835 MNDAP41218 407 aa10.9□□□□□ -0.66
CIITA-202ENST00000381835 RBMS2Q15434 407 aaKnown RBP10.9□□□□□ -0.66
CIITA-202ENST00000381835 C10orf128Q5T292 105 aa10.9□□□□□ -0.66
CIITA-202ENST00000381835 TSPO2Q5TGU0 170 aa10.9□□□□□ -0.66
CIITA-202ENST00000381835 DCXRQ7Z4W1 244 aa10.9□□□□□ -0.66
CIITA-202ENST00000381835 ADGRE4PQ86SQ3 457 aa10.9□□□□□ -0.66
CIITA-202ENST00000381835 LINC00469Q8N7U9 141 aa10.9□□□□□ -0.66
CIITA-202ENST00000381835 SHARPINQ9H0F6 387 aa10.9□□□□□ -0.66
CIITA-202ENST00000381835 FXYD6Q9H0Q3 95 aa10.9□□□□□ -0.66
CIITA-202ENST00000381835 SLCO5A1Q9H2Y9 848 aa10.9□□□□□ -0.66
CIITA-202ENST00000381835 C12orf49Q9H741 205 aa10.9□□□□□ -0.66
CIITA-202ENST00000381835 RNF122Q9H9V4 155 aa10.9□□□□□ -0.66
CIITA-202ENST00000381835 OPN4Q9UHM6 478 aa10.9□□□□□ -0.66
CIITA-202ENST00000381835 INTS1Q8N201 2190 aaKnown RBP10.9□□□□□ -0.66
CIITA-202ENST00000381835 NBEAQ8NFP9 2946 aa10.9□□□□□ -0.66
CIITA-202ENST00000381835 PKD1L2Q7Z442 2459 aa10.9□□□□□ -0.66
CIITA-202ENST00000381835 ANXA2P2A6NMY6 339 aa10.9□□□□□ -0.67
CIITA-202ENST00000381835 ATP6V1G2-DDX39BF2Z307 99 aa10.9□□□□□ -0.67
CIITA-202ENST00000381835 LGALS8O00214 317 aa10.9□□□□□ -0.67
CIITA-202ENST00000381835 MAS1P04201 325 aa10.9□□□□□ -0.67
CIITA-202ENST00000381835 ANXA2P07355 339 aaKnown RBP10.9□□□□□ -0.67
CIITA-202ENST00000381835 ZNF35P13682 527 aa10.9□□□□□ -0.67
CIITA-202ENST00000381835 ADRA2CP18825 462 aa10.9□□□□□ -0.67
CIITA-202ENST00000381835 ZNF84P51523 738 aa10.9□□□□□ -0.67
CIITA-202ENST00000381835 B2MP61769 119 aa10.9□□□□□ -0.67
CIITA-202ENST00000381835 ALKBH1Q13686 389 aaKnown RBP10.9□□□□□ -0.67
CIITA-202ENST00000381835 GK2Q14410 553 aaPredicted RBP10.9□□□□□ -0.67
CIITA-202ENST00000381835 KRTCAP3Q53RY4 240 aa10.9□□□□□ -0.67
CIITA-202ENST00000381835 ZNF684Q5T5D7 378 aa10.9□□□□□ -0.67
CIITA-202ENST00000381835 LRRN1Q6UXK5 716 aa10.9□□□□□ -0.67
CIITA-202ENST00000381835 OVCH2Q7RTZ1 564 aa10.9□□□□□ -0.67
CIITA-202ENST00000381835 NUFIP2Q7Z417 695 aaKnown RBP10.9□□□□□ -0.67
CIITA-202ENST00000381835 GCNT2Q8N0V5 402 aa10.9□□□□□ -0.67
CIITA-202ENST00000381835 RNF166Q96A37 237 aaPredicted RBP10.9□□□□□ -0.67
CIITA-202ENST00000381835 ABHD6Q9BV23 337 aa10.9□□□□□ -0.67
CIITA-202ENST00000381835 SLC7A10Q9NS82 523 aa10.9□□□□□ -0.67
CIITA-202ENST00000381835 MRM2Q9UI43 246 aaKnown RBP10.9□□□□□ -0.67
CIITA-202ENST00000381835 A8MXK9 166 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 AHRRA9YTQ3 701 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 F5H5P2 479 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 TEX46H3BTG2 121 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 GOSR2O14653 212 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 PHYHO14832 338 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 WNT11O96014 354 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 GABRA1P14867 456 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 ZNF133P52736 654 aaPredicted RBP10.89□□□□□ -0.67
CIITA-202ENST00000381835 H2BFSP57053 126 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 UBE2MP61081 183 aaKnown RBP10.89□□□□□ -0.67
CIITA-202ENST00000381835 C2orf68Q2NKX9 166 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 CEACAM16Q2WEN9 425 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 ZNF324BQ6AW86 544 aaPredicted RBP10.89□□□□□ -0.67
CIITA-202ENST00000381835 GSG1LQ6UXU4 331 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 SLC36A1Q7Z2H8 476 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 ZNF100Q8IYN0 542 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 LRRC18Q8N456 261 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 APH1AQ96BI3 265 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 SNRNP40Q96DI7 357 aaKnown RBP10.89□□□□□ -0.67
CIITA-202ENST00000381835 PRORYQ9H606 182 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 FRRS1LQ9P0K9 344 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 TMEM8BA6NDV4 472 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 XRCC3O43542 346 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 AGTR1P30556 359 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 CALCRP30988 508 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 GMFBP60983 142 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 EGR3Q06889 387 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 PLA2G7Q13093 441 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 PCK2Q16822 640 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 ACSF3Q4G176 576 aaPredicted RBP10.89□□□□□ -0.67
CIITA-202ENST00000381835 PRR30Q53SZ7 412 aaPredicted RBP10.89□□□□□ -0.67
CIITA-202ENST00000381835 TEX30Q5JUR7 227 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 LIPNQ5VXI9 398 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 LRRTM1Q86UE6 522 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 ZNF454Q8N9F8 522 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 OR2AK2Q8NG84 335 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 OR4C16Q8NGL9 310 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms