RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 MKXQ8IYA7 352 aa13.98□□□□□ -0.17
HMGN1-203ENST00000380748 SPTSSAQ969W0 71 aa13.98□□□□□ -0.17
HMGN1-203ENST00000380748 PRSS22Q9GZN4 317 aa13.98□□□□□ -0.17
HMGN1-203ENST00000380748 MUC13Q9H3R2 512 aa13.98□□□□□ -0.17
HMGN1-203ENST00000380748 PPP1R3EQ9H7J1 279 aa13.98□□□□□ -0.17
HMGN1-203ENST00000380748 INPP5EQ9NRR6 644 aa13.98□□□□□ -0.17
HMGN1-203ENST00000380748 TCF19Q9Y242 345 aa13.98□□□□□ -0.17
HMGN1-203ENST00000380748 ANKRD30BLA7E2S9 258 aa13.97□□□□□ -0.17
HMGN1-203ENST00000380748 CDIPTO14735 213 aa13.97□□□□□ -0.17
HMGN1-203ENST00000380748 SLC2A1P11166 492 aa13.97□□□□□ -0.17
HMGN1-203ENST00000380748 NAA10P41227 235 aaPredicted RBP13.97□□□□□ -0.17
HMGN1-203ENST00000380748 MAGOHP61326 146 aaKnown RBP13.97□□□□□ -0.17
HMGN1-203ENST00000380748 SELENOWP63302 87 aa13.97□□□□□ -0.17
HMGN1-203ENST00000380748 SLC36A3Q495N2 470 aa13.97□□□□□ -0.17
HMGN1-203ENST00000380748 ARSJQ5FYB0 599 aaPredicted RBP13.97□□□□□ -0.17
HMGN1-203ENST00000380748 CCDC121Q6ZUS5 278 aa13.97□□□□□ -0.17
HMGN1-203ENST00000380748 RNF144BQ7Z419 303 aa13.97□□□□□ -0.17
HMGN1-203ENST00000380748 DYNAPQ8N1N2 210 aa13.97□□□□□ -0.17
HMGN1-203ENST00000380748 OR5AU1Q8NGC0 362 aa13.97□□□□□ -0.17
HMGN1-203ENST00000380748 RAB3IPQ96QF0 476 aaPredicted RBP13.97□□□□□ -0.17
HMGN1-203ENST00000380748 LYSTQ99698 3801 aa13.97□□□□□ -0.17
HMGN1-203ENST00000380748 DNTTIP1Q9H147 329 aa13.97□□□□□ -0.17
HMGN1-203ENST00000380748 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.97□□□□□ -0.17
HMGN1-203ENST00000380748 TMEM5Q9Y2B1 443 aa13.97□□□□□ -0.17
HMGN1-203ENST00000380748 N6AMT1Q9Y5N5 214 aa13.97□□□□□ -0.17
HMGN1-203ENST00000380748 V9GYY5 206 aaPredicted RBP13.97□□□□□ -0.17
HMGN1-203ENST00000380748 DNAH1Q9P2D7 4330 aa13.97□□□□□ -0.17
HMGN1-203ENST00000380748 A6NDX4 124 aa13.96□□□□□ -0.17
HMGN1-203ENST00000380748 VGLL3A8MV65 326 aa13.96□□□□□ -0.17
HMGN1-203ENST00000380748 FXYD1O00168 92 aa13.96□□□□□ -0.17
HMGN1-203ENST00000380748 SIGLEC5O15389 551 aa13.96□□□□□ -0.17
HMGN1-203ENST00000380748 IFNW1P05000 195 aa13.96□□□□□ -0.17
HMGN1-203ENST00000380748 OTX1P32242 354 aaPredicted RBP13.96□□□□□ -0.17
HMGN1-203ENST00000380748 RPS27P42677 84 aaKnown RBP13.96□□□□□ -0.17
HMGN1-203ENST00000380748 VDAC2P45880 294 aaPredicted RBP13.96□□□□□ -0.17
HMGN1-203ENST00000380748 RPS6KA3P51812 740 aa13.96□□□□□ -0.17
HMGN1-203ENST00000380748 CAV3P56539 151 aa13.96□□□□□ -0.17
HMGN1-203ENST00000380748 CYLC2Q14093 348 aaPredicted RBP13.96□□□□□ -0.17
HMGN1-203ENST00000380748 TCTEX1D4Q5JR98 221 aa13.96□□□□□ -0.17
HMGN1-203ENST00000380748 ERICH5Q6P6B1 374 aa13.96□□□□□ -0.17
HMGN1-203ENST00000380748 DPY19L2P2Q6ZN68 376 aa13.96□□□□□ -0.17
HMGN1-203ENST00000380748 LHFPL4Q7Z7J7 247 aa13.96□□□□□ -0.17
HMGN1-203ENST00000380748 FAM185AQ8N0U4 392 aa13.96□□□□□ -0.17
HMGN1-203ENST00000380748 ANGPTL6Q8NI99 470 aa13.96□□□□□ -0.17
HMGN1-203ENST00000380748 MED30Q96HR3 178 aa13.96□□□□□ -0.17
HMGN1-203ENST00000380748 RSRC1Q96IZ7 334 aaKnown RBP13.96□□□□□ -0.17
HMGN1-203ENST00000380748 NMNAT3Q96T66 252 aa13.96□□□□□ -0.17
HMGN1-203ENST00000380748 TLNRD1Q9H1K6 362 aa13.96□□□□□ -0.17
HMGN1-203ENST00000380748 FN3KQ9H479 309 aa13.96□□□□□ -0.17
HMGN1-203ENST00000380748 MRPL22Q9NWU5 206 aaKnown RBP13.96□□□□□ -0.17
HMGN1-203ENST00000380748 SYNGR1O43759 233 aa13.95□□□□□ -0.18
HMGN1-203ENST00000380748 HLA-DQA2P01906 255 aa13.95□□□□□ -0.18
HMGN1-203ENST00000380748 NHLRC4P0CG21 123 aaPredicted RBP13.95□□□□□ -0.18
HMGN1-203ENST00000380748 TROVE2P10155 538 aaKnown RBP eCLIP13.95□□□□□ -0.18
HMGN1-203ENST00000380748 COX7A1P24310 79 aa13.95□□□□□ -0.18
HMGN1-203ENST00000380748 BLCAPP62952 87 aa13.95□□□□□ -0.18
HMGN1-203ENST00000380748 MXRA7P84157 204 aa13.95□□□□□ -0.18
HMGN1-203ENST00000380748 DRAM2Q6UX65 266 aa13.95□□□□□ -0.18
HMGN1-203ENST00000380748 RRM2BQ7LG56 351 aa13.95□□□□□ -0.18
HMGN1-203ENST00000380748 OR8J3Q8NGG0 315 aa13.95□□□□□ -0.18
HMGN1-203ENST00000380748 TSPEARQ8WU66 669 aa13.95□□□□□ -0.18
HMGN1-203ENST00000380748 ERMAPQ96PL5 475 aaPredicted RBP13.95□□□□□ -0.18
HMGN1-203ENST00000380748 RPRD1BQ9NQG5 326 aaKnown RBP13.95□□□□□ -0.18
HMGN1-203ENST00000380748 GAR1Q9NY12 217 aaKnown RBP13.95□□□□□ -0.18
HMGN1-203ENST00000380748 TIPRLO75663 272 aa13.94□□□□□ -0.18
HMGN1-203ENST00000380748 ACAA1P09110 424 aaPredicted RBP13.94□□□□□ -0.18
HMGN1-203ENST00000380748 PSKH1P11801 424 aa13.94□□□□□ -0.18
HMGN1-203ENST00000380748 PAICSP22234 425 aaKnown RBP13.94□□□□□ -0.18
HMGN1-203ENST00000380748 PRKXP51817 358 aa13.94□□□□□ -0.18
HMGN1-203ENST00000380748 LGALS4P56470 323 aa13.94□□□□□ -0.18
HMGN1-203ENST00000380748 CROCCP2Q86T23 111 aa13.94□□□□□ -0.18
HMGN1-203ENST00000380748 ZNRF1Q8ND25 227 aa13.94□□□□□ -0.18
HMGN1-203ENST00000380748 DPF1Q92782 380 aa13.94□□□□□ -0.18
HMGN1-203ENST00000380748 SPSB4Q96A44 273 aa13.94□□□□□ -0.18
HMGN1-203ENST00000380748 SH3GL1Q99961 368 aa13.94□□□□□ -0.18
HMGN1-203ENST00000380748 TMEM120AQ9BXJ8 343 aa13.94□□□□□ -0.18
HMGN1-203ENST00000380748 NSRP1Q9H0G5 558 aaKnown RBP13.94□□□□□ -0.18
HMGN1-203ENST00000380748 OPA3Q9H6K4 179 aa13.94□□□□□ -0.18
HMGN1-203ENST00000380748 C19orf12Q9NSK7 152 aa13.94□□□□□ -0.18
HMGN1-203ENST00000380748 TCRBV4S1A1TA0A5B7 111 aa13.93□□□□□ -0.18
HMGN1-203ENST00000380748 AKR7A2O43488 359 aa13.93□□□□□ -0.18
HMGN1-203ENST00000380748 RENP00797 406 aa13.93□□□□□ -0.18
HMGN1-203ENST00000380748 CHRM2P08172 466 aa13.93□□□□□ -0.18
HMGN1-203ENST00000380748 DDOSTP39656 456 aa13.93□□□□□ -0.18
HMGN1-203ENST00000380748 OMPP47874 163 aa13.93□□□□□ -0.18
HMGN1-203ENST00000380748 ERVFRD-1P60508 538 aa13.93□□□□□ -0.18
HMGN1-203ENST00000380748 FAM3AP98173 230 aa13.93□□□□□ -0.18
HMGN1-203ENST00000380748 DCTN2Q13561 401 aaKnown RBP13.93□□□□□ -0.18
HMGN1-203ENST00000380748 SLC16A9Q7RTY1 509 aa13.93□□□□□ -0.18
HMGN1-203ENST00000380748 ZBTB46Q86UZ6 589 aa13.93□□□□□ -0.18
HMGN1-203ENST00000380748 OR4K13Q8NH42 304 aa13.93□□□□□ -0.18
HMGN1-203ENST00000380748 RPS4Y2Q8TD47 263 aa13.93□□□□□ -0.18
HMGN1-203ENST00000380748 RPL3LQ92901 407 aaKnown RBP13.93□□□□□ -0.18
HMGN1-203ENST00000380748 COPS4Q9BT78 406 aa13.93□□□□□ -0.18
HMGN1-203ENST00000380748 CHID1Q9BWS9 393 aa13.93□□□□□ -0.18
HMGN1-203ENST00000380748 HEXA-AS1Q9H8Q6 139 aa13.93□□□□□ -0.18
HMGN1-203ENST00000380748 TSSC4Q9Y5U2 329 aaPredicted RBP13.93□□□□□ -0.18
HMGN1-203ENST00000380748 FAM90A8PA6NJQ4 464 aa13.92□□□□□ -0.18
HMGN1-203ENST00000380748 FAM220BPB1ANY3 271 aa13.92□□□□□ -0.18
HMGN1-203ENST00000380748 GLCEO94923 617 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms