RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 NAA40Q86UY6 237 aa20.23■□□□□ 0.83
VPS16-201ENST00000380443 ZNF775Q96BV0 537 aaPredicted RBP20.23■□□□□ 0.83
VPS16-201ENST00000380443 TMEM59Q9BXS4 323 aa20.23■□□□□ 0.83
VPS16-201ENST00000380443 IL17BQ9UHF5 180 aa20.23■□□□□ 0.83
VPS16-201ENST00000380443 ATPIF1Q9UII2 106 aa20.23■□□□□ 0.83
VPS16-201ENST00000380443 PLEKHA6Q9Y2H5 1048 aa20.23■□□□□ 0.83
VPS16-201ENST00000380443 E9PLN8 166 aa20.23■□□□□ 0.83
VPS16-201ENST00000380443 NME2P1O60361 137 aa20.23■□□□□ 0.83
VPS16-201ENST00000380443 OR2A4O95047 310 aa20.23■□□□□ 0.83
VPS16-201ENST00000380443 F10P00742 488 aa20.23■□□□□ 0.83
VPS16-201ENST00000380443 AMY2AP04746 511 aa20.23■□□□□ 0.83
VPS16-201ENST00000380443 SP1P08047 785 aa20.23■□□□□ 0.83
VPS16-201ENST00000380443 NAT2P11245 290 aa20.23■□□□□ 0.83
VPS16-201ENST00000380443 ZNF708P17019 499 aa20.23■□□□□ 0.83
VPS16-201ENST00000380443 ZNF24P17028 368 aa20.23■□□□□ 0.83
VPS16-201ENST00000380443 NME2P22392 152 aa20.23■□□□□ 0.83
VPS16-201ENST00000380443 CLDN18P56856 261 aa20.23■□□□□ 0.83
VPS16-201ENST00000380443 SOX8P57073 446 aa20.23■□□□□ 0.83
VPS16-201ENST00000380443 KISS1Q15726 138 aa20.23■□□□□ 0.83
VPS16-201ENST00000380443 CEACAM16Q2WEN9 425 aa20.23■□□□□ 0.83
VPS16-201ENST00000380443 TRAPPC6BQ86SZ2 158 aa20.23■□□□□ 0.83
VPS16-201ENST00000380443 DVL3Q92997 716 aaPredicted RBP20.23■□□□□ 0.83
VPS16-201ENST00000380443 GPR137Q96N19 417 aa20.23■□□□□ 0.83
VPS16-201ENST00000380443 OR2A7Q96R45 310 aa20.23■□□□□ 0.83
VPS16-201ENST00000380443 ZNF224Q9NZL3 707 aa20.23■□□□□ 0.83
VPS16-201ENST00000380443 NOSIPQ9Y314 301 aaKnown RBP20.23■□□□□ 0.83
VPS16-201ENST00000380443 MRPL33O75394 65 aaKnown RBP20.22■□□□□ 0.83
VPS16-201ENST00000380443 ZNF735P0CB33 412 aa20.22■□□□□ 0.83
VPS16-201ENST00000380443 VSIG10L2P0DP72 767 aa20.22■□□□□ 0.83
VPS16-201ENST00000380443 CBX5P45973 191 aa20.22■□□□□ 0.83
VPS16-201ENST00000380443 OR3A4PP47883 348 aa20.22■□□□□ 0.83
VPS16-201ENST00000380443 RNASE10Q5GAN6 216 aaKnown RBP20.22■□□□□ 0.83
VPS16-201ENST00000380443 IDO2Q6ZQW0 420 aa20.22■□□□□ 0.83
VPS16-201ENST00000380443 CHMP1BQ7LBR1 199 aa20.22■□□□□ 0.83
VPS16-201ENST00000380443 BPIFB2Q8N4F0 458 aa20.22■□□□□ 0.83
VPS16-201ENST00000380443 MDS2Q8NDY4 140 aa20.22■□□□□ 0.83
VPS16-201ENST00000380443 HAS2Q92819 552 aa20.22■□□□□ 0.83
VPS16-201ENST00000380443 SPSB1Q96BD6 273 aa20.22■□□□□ 0.83
VPS16-201ENST00000380443 SGK3Q96BR1 496 aa20.22■□□□□ 0.83
VPS16-201ENST00000380443 MCTS1Q9ULC4 181 aaKnown RBP20.22■□□□□ 0.83
VPS16-201ENST00000380443 PIGLQ9Y2B2 252 aa20.22■□□□□ 0.83
VPS16-201ENST00000380443 WIPF3A6NGB9 483 aa20.21■□□□□ 0.83
VPS16-201ENST00000380443 RPL36A-HNRNPH2H7BZ11 118 aa20.21■□□□□ 0.83
VPS16-201ENST00000380443 ZNF32P17041 273 aa20.21■□□□□ 0.83
VPS16-201ENST00000380443 PTGFRP43088 359 aa20.21■□□□□ 0.83
VPS16-201ENST00000380443 RRADP55042 308 aa20.21■□□□□ 0.83
VPS16-201ENST00000380443 PLGLB1Q02325 96 aa20.21■□□□□ 0.83
VPS16-201ENST00000380443 MPPED2Q15777 294 aa20.21■□□□□ 0.83
VPS16-201ENST00000380443 SLC16A14Q7RTX9 510 aa20.21■□□□□ 0.83
VPS16-201ENST00000380443 FAM89BQ8N5H3 189 aa20.21■□□□□ 0.83
VPS16-201ENST00000380443 STEAP2Q8NFT2 490 aa20.21■□□□□ 0.83
VPS16-201ENST00000380443 SEMA6DQ8NFY4 1073 aa20.21■□□□□ 0.83
VPS16-201ENST00000380443 ZNF845Q96IR2 970 aaPredicted RBP20.21■□□□□ 0.83
VPS16-201ENST00000380443 SELENOIQ9C0D9 397 aa20.21■□□□□ 0.83
VPS16-201ENST00000380443 IFT46Q9NQC8 304 aa20.21■□□□□ 0.83
VPS16-201ENST00000380443 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.21■□□□□ 0.83
VPS16-201ENST00000380443 ANAPC10Q9UM13 185 aa20.21■□□□□ 0.83
VPS16-201ENST00000380443 CNOT1A5YKK6 2376 aaKnown RBP20.21■□□□□ 0.83
VPS16-201ENST00000380443 ZNF724A8MTY0 619 aa20.2■□□□□ 0.82
VPS16-201ENST00000380443 MPIG6BO95866 241 aa20.2■□□□□ 0.82
VPS16-201ENST00000380443 CD46P15529 392 aa20.2■□□□□ 0.82
VPS16-201ENST00000380443 C4BPBP20851 252 aa20.2■□□□□ 0.82
VPS16-201ENST00000380443 ACTBL2Q562R1 376 aa20.2■□□□□ 0.82
VPS16-201ENST00000380443 LINC00696Q6ZRV3 163 aa20.2■□□□□ 0.82
VPS16-201ENST00000380443 TMEM251Q8N6I4 163 aa20.2■□□□□ 0.82
VPS16-201ENST00000380443 OR2T35Q8NGX2 323 aa20.2■□□□□ 0.82
VPS16-201ENST00000380443 ABHD3Q8WU67 409 aa20.2■□□□□ 0.82
VPS16-201ENST00000380443 RAB3CQ96E17 227 aa20.2■□□□□ 0.82
VPS16-201ENST00000380443 ALKBH3Q96Q83 286 aaPredicted RBP20.2■□□□□ 0.82
VPS16-201ENST00000380443 OR2H1Q9GZK4 316 aa20.2■□□□□ 0.82
VPS16-201ENST00000380443 ZMAT3Q9HA38 289 aaKnown RBP20.2■□□□□ 0.82
VPS16-201ENST00000380443 ACKR4Q9NPB9 350 aa20.2■□□□□ 0.82
VPS16-201ENST00000380443 TMEM82A0PJX8 343 aa20.2■□□□□ 0.82
VPS16-201ENST00000380443 ACTL6AO96019 429 aa20.2■□□□□ 0.82
VPS16-201ENST00000380443 DBHP09172 617 aa20.2■□□□□ 0.82
VPS16-201ENST00000380443 B4GALT1P15291 398 aa20.2■□□□□ 0.82
VPS16-201ENST00000380443 NAT1P18440 290 aa20.2■□□□□ 0.82
VPS16-201ENST00000380443 ANOS1P23352 680 aa20.2■□□□□ 0.82
VPS16-201ENST00000380443 GNG2P59768 71 aa20.2■□□□□ 0.82
VPS16-201ENST00000380443 RTL6Q6ICC9 239 aa20.2■□□□□ 0.82
VPS16-201ENST00000380443 ZNF774Q6NX45 483 aa20.2■□□□□ 0.82
VPS16-201ENST00000380443 GALNT16Q8N428 558 aa20.2■□□□□ 0.82
VPS16-201ENST00000380443 LILRB4Q8NHJ6 448 aa20.2■□□□□ 0.82
VPS16-201ENST00000380443 S100A13Q99584 98 aa20.2■□□□□ 0.82
VPS16-201ENST00000380443 TINAGL1Q9GZM7 467 aaPredicted RBP20.2■□□□□ 0.82
VPS16-201ENST00000380443 HIST1H1DP16402 221 aaKnown RBP20.19■□□□□ 0.82
VPS16-201ENST00000380443 PRKACBP22694 351 aa20.19■□□□□ 0.82
VPS16-201ENST00000380443 RPS27AP62979 156 aaKnown RBP20.19■□□□□ 0.82
VPS16-201ENST00000380443 PSG4Q00888 419 aa20.19■□□□□ 0.82
VPS16-201ENST00000380443 UBE2V2Q15819 145 aa20.19■□□□□ 0.82
VPS16-201ENST00000380443 DTX1Q86Y01 620 aa20.19■□□□□ 0.82
VPS16-201ENST00000380443 ZNF100Q8IYN0 542 aa20.19■□□□□ 0.82
VPS16-201ENST00000380443 ZDHHC22Q8N966 263 aa20.19■□□□□ 0.82
VPS16-201ENST00000380443 SLC39A7Q92504 469 aa20.19■□□□□ 0.82
VPS16-201ENST00000380443 SPACA5Q96QH8 159 aa20.19■□□□□ 0.82
VPS16-201ENST00000380443 PLA2G3Q9NZ20 509 aa20.19■□□□□ 0.82
VPS16-201ENST00000380443 C5orf63A6NC05 138 aa20.18■□□□□ 0.82
VPS16-201ENST00000380443 M0QYG6 137 aa20.18■□□□□ 0.82
VPS16-201ENST00000380443 AKR7A2O43488 359 aa20.18■□□□□ 0.82
VPS16-201ENST00000380443 CRTAPO75718 401 aaPredicted RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms