RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 DMRTA2Q96SC8 542 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 PHF7Q9BWX1 381 aaPredicted RBP11.23□□□□□ -0.61
CHD3-203ENST00000380358 LSM2Q9Y333 95 aaKnown RBP11.23□□□□□ -0.61
CHD3-203ENST00000380358 TMPRSS11DO60235 418 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 ANKRD34CP0C6C1 535 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 ACHEP22303 614 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 ENDOGQ14249 297 aaKnown RBP11.23□□□□□ -0.61
CHD3-203ENST00000380358 HLA-BQ31612 363 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 FFAR4Q5NUL3 377 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 ZDHHC5Q9C0B5 715 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 TRAPPC1Q9Y5R8 145 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 MYH1P12882 1939 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 MYH4Q9Y623 1939 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 HTR1FP30939 366 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 PPP2CBP62714 309 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 RAB1AP62820 205 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 OR5AP2Q8NGF4 316 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 MS4A8Q9BY19 250 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 SRD5A3Q9H8P0 318 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 ABCC6O95255 1503 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 LIMK1P53667 647 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 TNFAIP6P98066 277 aaPredicted RBP11.23□□□□□ -0.61
CHD3-203ENST00000380358 Q3ZCU0 254 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 C11orf54Q9H0W9 315 aaPredicted RBP11.23□□□□□ -0.61
CHD3-203ENST00000380358 ZNF768Q9H5H4 540 aaKnown RBP11.23□□□□□ -0.61
CHD3-203ENST00000380358 NID2Q14112 1375 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 FBLL1A6NHQ2 334 aaKnown RBP11.23□□□□□ -0.61
CHD3-203ENST00000380358 PLK5Q496M5 336 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 ETV3LQ6ZN32 361 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 SLC36A1Q7Z2H8 476 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 BAHD1Q8TBE0 780 aaPredicted RBP11.23□□□□□ -0.61
CHD3-203ENST00000380358 SIRT5Q9NXA8 310 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 CORINQ9Y5Q5 1042 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 SNNO75324 88 aaPredicted RBP11.22□□□□□ -0.61
CHD3-203ENST00000380358 ETV1P50549 477 aa11.22□□□□□ -0.61
CHD3-203ENST00000380358 FGF8P55075 233 aaPredicted RBP11.22□□□□□ -0.61
CHD3-203ENST00000380358 SLC48A1Q6P1K1 146 aa11.22□□□□□ -0.61
CHD3-203ENST00000380358 ZNF519Q8TB69 540 aa11.22□□□□□ -0.61
CHD3-203ENST00000380358 PBOV1Q9GZY1 135 aa11.22□□□□□ -0.61
CHD3-203ENST00000380358 TRABD2BA6NFA1 517 aa11.22□□□□□ -0.61
CHD3-203ENST00000380358 RPL30P62888 115 aaKnown RBP11.22□□□□□ -0.61
CHD3-203ENST00000380358 CST9Q5W186 159 aa11.22□□□□□ -0.61
CHD3-203ENST00000380358 SBK3P0C264 359 aa11.22□□□□□ -0.61
CHD3-203ENST00000380358 TFF2Q03403 129 aa11.22□□□□□ -0.61
CHD3-203ENST00000380358 ELAVL1Q15717 326 aaKnown RBP11.22□□□□□ -0.61
CHD3-203ENST00000380358 ANKRD53Q8N9V6 530 aa11.22□□□□□ -0.61
CHD3-203ENST00000380358 C5orf17Q8NAS9 161 aa11.22□□□□□ -0.61
CHD3-203ENST00000380358 OR4C3Q8NH37 302 aa11.22□□□□□ -0.61
CHD3-203ENST00000380358 NKX6-2Q9C056 277 aaPredicted RBP11.22□□□□□ -0.61
CHD3-203ENST00000380358 IL36GQ9NZH8 169 aa11.22□□□□□ -0.61
CHD3-203ENST00000380358 RPLP1P05386 114 aaKnown RBP11.22□□□□□ -0.61
CHD3-203ENST00000380358 NKAIN3Q8N8D7 197 aa11.22□□□□□ -0.61
CHD3-203ENST00000380358 TMEM37Q8WXS4 190 aa11.22□□□□□ -0.61
CHD3-203ENST00000380358 WDR61Q9GZS3 305 aaKnown RBP11.22□□□□□ -0.61
CHD3-203ENST00000380358 MYOZ1Q9NP98 299 aaPredicted RBP11.22□□□□□ -0.61
CHD3-203ENST00000380358 KLK4Q9Y5K2 254 aa11.22□□□□□ -0.61
CHD3-203ENST00000380358 GCGP01275 180 aa11.22□□□□□ -0.61
CHD3-203ENST00000380358 CR2P20023 1033 aa11.22□□□□□ -0.61
CHD3-203ENST00000380358 SPPL3Q8TCT6 385 aa11.22□□□□□ -0.61
CHD3-203ENST00000380358 RASL11BQ9BPW5 248 aa11.22□□□□□ -0.61
CHD3-203ENST00000380358 SLC26A1Q9H2B4 701 aa11.22□□□□□ -0.61
CHD3-203ENST00000380358 DRGXA6NNA5 263 aa11.21□□□□□ -0.61
CHD3-203ENST00000380358 NUDT3O95989 172 aa11.21□□□□□ -0.61
CHD3-203ENST00000380358 PATE4P0C8F1 98 aa11.21□□□□□ -0.61
CHD3-203ENST00000380358 TCL1AP56279 114 aa11.21□□□□□ -0.61
CHD3-203ENST00000380358 PCK2Q16822 640 aa11.21□□□□□ -0.61
CHD3-203ENST00000380358 C19orf48Q6RUI8 117 aa11.21□□□□□ -0.61
CHD3-203ENST00000380358 Q6ZS52 159 aa11.21□□□□□ -0.61
CHD3-203ENST00000380358 MYPOPQ86VE0 399 aaPredicted RBP11.21□□□□□ -0.61
CHD3-203ENST00000380358 OR5R1Q8NH85 324 aa11.21□□□□□ -0.61
CHD3-203ENST00000380358 CLDN23Q96B33 292 aa11.21□□□□□ -0.61
CHD3-203ENST00000380358 SORT1Q99523 831 aa11.21□□□□□ -0.61
CHD3-203ENST00000380358 VSIG4Q9Y279 399 aa11.21□□□□□ -0.61
CHD3-203ENST00000380358 XRN1Q8IZH2 1706 aaKnown RBP11.21□□□□□ -0.61
CHD3-203ENST00000380358 M0R3E3 92 aa11.21□□□□□ -0.61
CHD3-203ENST00000380358 SYT5O00445 386 aa11.21□□□□□ -0.61
CHD3-203ENST00000380358 GFRA1P56159 465 aa11.21□□□□□ -0.61
CHD3-203ENST00000380358 RELAQ04206 551 aa11.21□□□□□ -0.61
CHD3-203ENST00000380358 GUSBP11Q6P575 273 aa11.21□□□□□ -0.61
CHD3-203ENST00000380358 GRAMD2BQ96HH9 432 aa11.21□□□□□ -0.61
CHD3-203ENST00000380358 ZMIZ1Q9ULJ6 1067 aa11.21□□□□□ -0.61
CHD3-203ENST00000380358 CRYABP02511 175 aaKnown RBP11.21□□□□□ -0.61
CHD3-203ENST00000380358 FECHP22830 423 aa11.21□□□□□ -0.61
CHD3-203ENST00000380358 GGTLC2Q14390 218 aa11.21□□□□□ -0.61
CHD3-203ENST00000380358 GPX7Q96SL4 187 aaPredicted RBP11.21□□□□□ -0.61
CHD3-203ENST00000380358 RAB1BQ9H0U4 201 aa11.21□□□□□ -0.61
CHD3-203ENST00000380358 RHOFQ9HBH0 211 aa11.21□□□□□ -0.61
CHD3-203ENST00000380358 LSAMPQ13449 338 aa11.21□□□□□ -0.61
CHD3-203ENST00000380358 SLC38A6Q8IZM9 456 aa11.21□□□□□ -0.61
CHD3-203ENST00000380358 ANKRD60Q9BZ19 345 aa11.21□□□□□ -0.61
CHD3-203ENST00000380358 LPAR5Q9H1C0 372 aa11.21□□□□□ -0.61
CHD3-203ENST00000380358 IGHV3OR15-7A0A075B7D8 119 aa11.21□□□□□ -0.62
CHD3-203ENST00000380358 ZNHIT1O43257 154 aa11.21□□□□□ -0.62
CHD3-203ENST00000380358 ADAM20O43506 726 aa11.21□□□□□ -0.62
CHD3-203ENST00000380358 COX5AP20674 150 aa11.21□□□□□ -0.62
CHD3-203ENST00000380358 RPL18Q07020 188 aaKnown RBP11.21□□□□□ -0.62
CHD3-203ENST00000380358 IHHQ14623 411 aa11.21□□□□□ -0.62
CHD3-203ENST00000380358 MFSD4AQ8N468 514 aa11.21□□□□□ -0.62
CHD3-203ENST00000380358 OR52L2PQ8NGH6 319 aa11.21□□□□□ -0.62
CHD3-203ENST00000380358 CNOT2Q9NZN8 540 aaKnown RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms