RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 CD200P41217 278 aa15.87■□□□□ 0.13
SSU72-203ENST00000378725 SRP9P49458 86 aaKnown RBP15.87■□□□□ 0.13
SSU72-203ENST00000378725 TMEM33P57088 247 aa15.87■□□□□ 0.13
SSU72-203ENST00000378725 SLC35A2P78381 396 aa15.87■□□□□ 0.13
SSU72-203ENST00000378725 RIPPLY1Q0D2K3 151 aa15.87■□□□□ 0.13
SSU72-203ENST00000378725 ALKBH1Q13686 389 aaKnown RBP15.87■□□□□ 0.13
SSU72-203ENST00000378725 OR8G1Q15617 311 aa15.87■□□□□ 0.13
SSU72-203ENST00000378725 OR2G6Q5TZ20 316 aa15.87■□□□□ 0.13
SSU72-203ENST00000378725 DOK3Q7L591 496 aa15.87■□□□□ 0.13
SSU72-203ENST00000378725 FTMTQ8N4E7 242 aa15.87■□□□□ 0.13
SSU72-203ENST00000378725 CCDC54Q8NEL0 328 aa15.87■□□□□ 0.13
SSU72-203ENST00000378725 ITLN1Q8WWA0 313 aa15.87■□□□□ 0.13
SSU72-203ENST00000378725 MYDGFQ969H8 173 aa15.87■□□□□ 0.13
SSU72-203ENST00000378725 OR2V2Q96R30 315 aa15.87■□□□□ 0.13
SSU72-203ENST00000378725 CHODLQ9H9P2 273 aa15.87■□□□□ 0.13
SSU72-203ENST00000378725 PAK1IP1Q9NWT1 392 aaPredicted RBP15.87■□□□□ 0.13
SSU72-203ENST00000378725 BABAM2Q9NXR7 383 aa15.87■□□□□ 0.13
SSU72-203ENST00000378725 UBAP1Q9NZ09 502 aa15.87■□□□□ 0.13
SSU72-203ENST00000378725 OTOGQ6ZRI0 2925 aa15.87■□□□□ 0.13
SSU72-203ENST00000378725 ARID1AO14497 2285 aa15.87■□□□□ 0.13
SSU72-203ENST00000378725 AKAP9Q99996 3911 aa15.86■□□□□ 0.13
SSU72-203ENST00000378725 ZNF816-ZNF321PA0A0X1KG74 233 aa15.86■□□□□ 0.13
SSU72-203ENST00000378725 TRIM64A6NGJ6 449 aa15.86■□□□□ 0.13
SSU72-203ENST00000378725 TRIM64BA6NI03 449 aa15.86■□□□□ 0.13
SSU72-203ENST00000378725 OR4C45A6NMZ5 311 aa15.86■□□□□ 0.13
SSU72-203ENST00000378725 PTBP3O95758 552 aaKnown RBP15.86■□□□□ 0.13
SSU72-203ENST00000378725 UBCP0CG48 685 aaKnown RBP15.86■□□□□ 0.13
SSU72-203ENST00000378725 GATA4P43694 442 aa15.86■□□□□ 0.13
SSU72-203ENST00000378725 CCDC58Q4VC31 144 aa15.86■□□□□ 0.13
SSU72-203ENST00000378725 RBM48Q5RL73 367 aaKnown RBP15.86■□□□□ 0.13
SSU72-203ENST00000378725 TMEM244Q5VVB8 128 aa15.86■□□□□ 0.13
SSU72-203ENST00000378725 COMMD2Q86X83 199 aa15.86■□□□□ 0.13
SSU72-203ENST00000378725 ADAT1Q9BUB4 502 aaKnown RBP15.86■□□□□ 0.13
SSU72-203ENST00000378725 CDCA4Q9BXL8 241 aa15.86■□□□□ 0.13
SSU72-203ENST00000378725 PPP1R3EQ9H7J1 279 aa15.86■□□□□ 0.13
SSU72-203ENST00000378725 MPC1Q9Y5U8 109 aa15.86■□□□□ 0.13
SSU72-203ENST00000378725 A0A1B0GVI7 797 aa15.85■□□□□ 0.13
SSU72-203ENST00000378725 CDC14BO60729 498 aa15.85■□□□□ 0.13
SSU72-203ENST00000378725 SLC25A16P16260 332 aa15.85■□□□□ 0.13
SSU72-203ENST00000378725 CARTPTQ16568 116 aa15.85■□□□□ 0.13
SSU72-203ENST00000378725 ODF4Q2M2E3 257 aa15.85■□□□□ 0.13
SSU72-203ENST00000378725 HFEQ30201 348 aa15.85■□□□□ 0.13
SSU72-203ENST00000378725 RDH10Q8IZV5 341 aa15.85■□□□□ 0.13
SSU72-203ENST00000378725 NANOGP1Q8N7R0 232 aa15.85■□□□□ 0.13
SSU72-203ENST00000378725 RPS4Y2Q8TD47 263 aa15.85■□□□□ 0.13
SSU72-203ENST00000378725 GATAD2BQ8WXI9 593 aa15.85■□□□□ 0.13
SSU72-203ENST00000378725 TMUB1Q9BVT8 246 aa15.85■□□□□ 0.13
SSU72-203ENST00000378725 PAPOLGQ9BWT3 736 aaKnown RBP15.85■□□□□ 0.13
SSU72-203ENST00000378725 GCM1Q9NP62 436 aa15.85■□□□□ 0.13
SSU72-203ENST00000378725 ABCB9Q9NP78 766 aa15.85■□□□□ 0.13
SSU72-203ENST00000378725 ZNF275Q9NSD4 429 aaPredicted RBP15.85■□□□□ 0.13
SSU72-203ENST00000378725 PIGLQ9Y2B2 252 aa15.85■□□□□ 0.13
SSU72-203ENST00000378725 CACNG2Q9Y698 323 aa15.85■□□□□ 0.13
SSU72-203ENST00000378725 MYO9AB2RTY4 2548 aa15.85■□□□□ 0.13
SSU72-203ENST00000378725 A0A096LNT2 108 aa15.84■□□□□ 0.13
SSU72-203ENST00000378725 LOC100289279A0A1B0GTE1 492 aa15.84■□□□□ 0.13
SSU72-203ENST00000378725 OGG1O15527 345 aa15.84■□□□□ 0.13
SSU72-203ENST00000378725 SYT7O43581 403 aa15.84■□□□□ 0.13
SSU72-203ENST00000378725 RPSAP08865 295 aaKnown RBP15.84■□□□□ 0.13
SSU72-203ENST00000378725 ZNF12P17014 697 aa15.84■□□□□ 0.13
SSU72-203ENST00000378725 GNALP38405 381 aa15.84■□□□□ 0.13
SSU72-203ENST00000378725 NR4A2P43354 598 aa15.84■□□□□ 0.13
SSU72-203ENST00000378725 GTF2A1P52655 376 aaPredicted RBP15.84■□□□□ 0.13
SSU72-203ENST00000378725 MZT1Q08AG7 82 aa15.84■□□□□ 0.13
SSU72-203ENST00000378725 PRDX4Q13162 271 aa15.84■□□□□ 0.13
SSU72-203ENST00000378725 TMEM42Q69YG0 159 aa15.84■□□□□ 0.13
SSU72-203ENST00000378725 RPL22L1Q6P5R6 122 aaKnown RBP15.84■□□□□ 0.13
SSU72-203ENST00000378725 OR5P3Q8WZ94 311 aa15.84■□□□□ 0.13
SSU72-203ENST00000378725 PIGCQ92535 297 aa15.84■□□□□ 0.13
SSU72-203ENST00000378725 CCL17Q92583 94 aa15.84■□□□□ 0.13
SSU72-203ENST00000378725 SGCDQ92629 289 aa15.84■□□□□ 0.13
SSU72-203ENST00000378725 ERGIC1Q969X5 290 aa15.84■□□□□ 0.13
SSU72-203ENST00000378725 ITPKCQ96DU7 683 aa15.84■□□□□ 0.13
SSU72-203ENST00000378725 PIMREGQ9BSJ6 248 aa15.84■□□□□ 0.13
SSU72-203ENST00000378725 REG4Q9BYZ8 158 aa15.84■□□□□ 0.13
SSU72-203ENST00000378725 ERVK-18Q9QC07 812 aa15.84■□□□□ 0.13
SSU72-203ENST00000378725 ENPP5Q9UJA9 477 aa15.84■□□□□ 0.13
SSU72-203ENST00000378725 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.83■□□□□ 0.12
SSU72-203ENST00000378725 LOC107986453A0A1B0GWG9 222 aa15.83■□□□□ 0.12
SSU72-203ENST00000378725 TMEM212A6NML5 194 aa15.83■□□□□ 0.12
SSU72-203ENST00000378725 ZNF850A8MQ14 1090 aa15.83■□□□□ 0.12
SSU72-203ENST00000378725 IFNL4K9M1U5 179 aa15.83■□□□□ 0.12
SSU72-203ENST00000378725 ZFPL1O95159 310 aa15.83■□□□□ 0.12
SSU72-203ENST00000378725 FAHP16930 419 aa15.83■□□□□ 0.12
SSU72-203ENST00000378725 PMELP40967 661 aa15.83■□□□□ 0.12
SSU72-203ENST00000378725 IRF3Q14653 427 aa15.83■□□□□ 0.12
SSU72-203ENST00000378725 ZNF181Q2M3W8 571 aa15.83■□□□□ 0.12
SSU72-203ENST00000378725 XAF1Q6GPH4 301 aa15.83■□□□□ 0.12
SSU72-203ENST00000378725 OR8S1Q8NH09 359 aa15.83■□□□□ 0.12
SSU72-203ENST00000378725 DVL3Q92997 716 aaPredicted RBP15.83■□□□□ 0.12
SSU72-203ENST00000378725 C10orf35Q96D05 121 aa15.83■□□□□ 0.12
SSU72-203ENST00000378725 BPESC1Q9GZL8 116 aa15.83■□□□□ 0.12
SSU72-203ENST00000378725 TMEM106BQ9NUM4 274 aa15.83■□□□□ 0.12
SSU72-203ENST00000378725 C14orf119Q9NWQ9 140 aa15.83■□□□□ 0.12
SSU72-203ENST00000378725 TREM2Q9NZC2 230 aa15.83■□□□□ 0.12
SSU72-203ENST00000378725 PPP1R3CQ9UQK1 317 aa15.83■□□□□ 0.12
SSU72-203ENST00000378725 ERGIC3Q9Y282 383 aa15.83■□□□□ 0.12
SSU72-203ENST00000378725 SIRT4Q9Y6E7 314 aaPredicted RBP15.83■□□□□ 0.12
SSU72-203ENST00000378725 TRBV2A0A0J9YWF9 115 aa15.82■□□□□ 0.12
SSU72-203ENST00000378725 ANXA2P2A6NMY6 339 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms