RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 CPNE4Q96A23 557 aaPredicted RBP17.72■□□□□ 0.43
VSX1-202ENST00000376709 OR10A2Q9H208 303 aa17.72■□□□□ 0.43
VSX1-202ENST00000376709 B3GNT2Q9NY97 397 aa17.72■□□□□ 0.43
VSX1-202ENST00000376709 OPN4Q9UHM6 478 aa17.72■□□□□ 0.43
VSX1-202ENST00000376709 KCNK7Q9Y2U2 307 aa17.72■□□□□ 0.43
VSX1-202ENST00000376709 KNTC1P50748 2209 aa17.72■□□□□ 0.43
VSX1-202ENST00000376709 F5H5P2 479 aa17.72■□□□□ 0.43
VSX1-202ENST00000376709 SOCS1O15524 211 aa17.72■□□□□ 0.43
VSX1-202ENST00000376709 HRH1P35367 487 aa17.72■□□□□ 0.43
VSX1-202ENST00000376709 RFC3P40938 356 aa17.72■□□□□ 0.43
VSX1-202ENST00000376709 EIF3IQ13347 325 aaKnown RBP17.72■□□□□ 0.43
VSX1-202ENST00000376709 GRK1Q15835 563 aa17.72■□□□□ 0.43
VSX1-202ENST00000376709 SNAI3Q3KNW1 292 aa17.72■□□□□ 0.43
VSX1-202ENST00000376709 OR52H1Q8NGJ2 320 aa17.72■□□□□ 0.43
VSX1-202ENST00000376709 ZNF845Q96IR2 970 aaPredicted RBP17.72■□□□□ 0.43
VSX1-202ENST00000376709 FAM173AQ9BQD7 235 aa17.72■□□□□ 0.43
VSX1-202ENST00000376709 URM1Q9BTM9 101 aaKnown RBP17.72■□□□□ 0.43
VSX1-202ENST00000376709 CHST5Q9GZS9 411 aa17.72■□□□□ 0.43
VSX1-202ENST00000376709 CST11Q9H112 138 aa17.72■□□□□ 0.43
VSX1-202ENST00000376709 TERTO14746 1132 aaKnown RBP17.71■□□□□ 0.43
VSX1-202ENST00000376709 NOS1APO75052 506 aaPredicted RBP17.71■□□□□ 0.43
VSX1-202ENST00000376709 NEURL1O76050 574 aa17.71■□□□□ 0.43
VSX1-202ENST00000376709 CST2P09228 141 aa17.71■□□□□ 0.43
VSX1-202ENST00000376709 ITGA3P26006 1051 aa17.71■□□□□ 0.43
VSX1-202ENST00000376709 EXOSC2Q13868 293 aaKnown RBP17.71■□□□□ 0.43
VSX1-202ENST00000376709 UBE2V2Q15819 145 aa17.71■□□□□ 0.43
VSX1-202ENST00000376709 MYO7BQ6PIF6 2116 aa17.71■□□□□ 0.43
VSX1-202ENST00000376709 OR56B1Q8NGI3 324 aa17.71■□□□□ 0.43
VSX1-202ENST00000376709 ABHD3Q8WU67 409 aa17.71■□□□□ 0.43
VSX1-202ENST00000376709 ELMOD3Q96FG2 381 aa17.71■□□□□ 0.43
VSX1-202ENST00000376709 SIGLEC12Q96PQ1 595 aa17.71■□□□□ 0.43
VSX1-202ENST00000376709 SLC2A8Q9NY64 477 aa17.71■□□□□ 0.43
VSX1-202ENST00000376709 ABI3Q9P2A4 366 aa17.71■□□□□ 0.43
VSX1-202ENST00000376709 OR14I1A6ND48 311 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 H3BUI4 141 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 M0R233 179 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 SSX5O60225 188 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 TNFSF15O95150 251 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 GSTP1P09211 210 aaKnown RBP17.7■□□□□ 0.42
VSX1-202ENST00000376709 PRF1P14222 555 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 HIST1H1DP16402 221 aaKnown RBP17.7■□□□□ 0.42
VSX1-202ENST00000376709 C4BPBP20851 252 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 PTGFRP43088 359 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 SCRN3Q0VDG4 424 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 ZMYND11Q15326 602 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 RSPO4Q2I0M5 234 aaPredicted RBP17.7■□□□□ 0.42
VSX1-202ENST00000376709 PLAC9Q5JTB6 97 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 PDSS1Q5T2R2 415 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 ZNF774Q6NX45 483 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 DRAM2Q6UX65 266 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.7■□□□□ 0.42
VSX1-202ENST00000376709 SUMF1Q8NBK3 374 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 OR2M7Q8NG81 312 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 B4GALT7Q9UBV7 327 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 PLSCR5A0PG75 271 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 STMND1H3BQB6 276 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 SYNGR3O43761 229 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 IFNA6P05013 189 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 CRYGSP22914 178 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 NFYAP23511 347 aaPredicted RBP17.7■□□□□ 0.42
VSX1-202ENST00000376709 DHODHQ02127 395 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 DCAF10Q5QP82 559 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 SFRP5Q5T4F7 317 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 DCAF12L2Q5VW00 463 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 C17orf107Q6ZR85 190 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 DTX1Q86Y01 620 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 C12orf45Q8N5I9 185 aaPredicted RBP17.7■□□□□ 0.42
VSX1-202ENST00000376709 S100A13Q99584 98 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 FOXB1Q99853 325 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 PCDHGA1Q9Y5H4 931 aa17.7■□□□□ 0.42
VSX1-202ENST00000376709 CYTIPO60759 359 aa17.69■□□□□ 0.42
VSX1-202ENST00000376709 IFNA7P01567 189 aa17.69■□□□□ 0.42
VSX1-202ENST00000376709 FCGR2AP12318 317 aa17.69■□□□□ 0.42
VSX1-202ENST00000376709 MPPED2Q15777 294 aa17.69■□□□□ 0.42
VSX1-202ENST00000376709 CEACAM16Q2WEN9 425 aa17.69■□□□□ 0.42
VSX1-202ENST00000376709 CCDC54Q8NEL0 328 aa17.69■□□□□ 0.42
VSX1-202ENST00000376709 OR1F12Q8NHA8 337 aa17.69■□□□□ 0.42
VSX1-202ENST00000376709 C10orf35Q96D05 121 aa17.69■□□□□ 0.42
VSX1-202ENST00000376709 TMPRSS13Q9BYE2 586 aa17.69■□□□□ 0.42
VSX1-202ENST00000376709 MYOZ1Q9NP98 299 aaPredicted RBP17.69■□□□□ 0.42
VSX1-202ENST00000376709 ZNF224Q9NZL3 707 aa17.69■□□□□ 0.42
VSX1-202ENST00000376709 GHRLQ9UBU3 117 aa17.69■□□□□ 0.42
VSX1-202ENST00000376709 VSIG4Q9Y279 399 aa17.69■□□□□ 0.42
VSX1-202ENST00000376709 L7N2F9 121 aa17.69■□□□□ 0.42
VSX1-202ENST00000376709 CFDP00746 253 aaPredicted RBP17.69■□□□□ 0.42
VSX1-202ENST00000376709 HLA-AP01891 365 aaKnown RBP17.69■□□□□ 0.42
VSX1-202ENST00000376709 ZNF32P17041 273 aa17.69■□□□□ 0.42
VSX1-202ENST00000376709 CXCL2P19875 107 aa17.69■□□□□ 0.42
VSX1-202ENST00000376709 TBPP20226 339 aa17.69■□□□□ 0.42
VSX1-202ENST00000376709 OR3A3P47888 321 aa17.69■□□□□ 0.42
VSX1-202ENST00000376709 DHRS2Q13268 280 aa17.69■□□□□ 0.42
VSX1-202ENST00000376709 OR51T1Q8NGJ9 327 aa17.69■□□□□ 0.42
VSX1-202ENST00000376709 OR2AE1Q8NHA4 323 aa17.69■□□□□ 0.42
VSX1-202ENST00000376709 PIGTQ969N2 578 aa17.69■□□□□ 0.42
VSX1-202ENST00000376709 SGK3Q96BR1 496 aa17.69■□□□□ 0.42
VSX1-202ENST00000376709 HES7Q9BYE0 225 aa17.69■□□□□ 0.42
VSX1-202ENST00000376709 ZNF703Q9H7S9 590 aaPredicted RBP17.69■□□□□ 0.42
VSX1-202ENST00000376709 LINC01387J3KSC0 135 aa17.68■□□□□ 0.42
VSX1-202ENST00000376709 PATE4P0C8F1 98 aa17.68■□□□□ 0.42
VSX1-202ENST00000376709 LIPCP11150 499 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms