RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 ZC3H10Q96K80 434 aaKnown RBP12.83□□□□□ -0.35
MSH5-201ENST00000375703 OR10A2Q9H208 303 aa12.83□□□□□ -0.35
MSH5-201ENST00000375703 SHPKQ9UHJ6 478 aa12.83□□□□□ -0.35
MSH5-201ENST00000375703 FLVCR1Q9Y5Y0 555 aa12.83□□□□□ -0.35
MSH5-201ENST00000375703 IGKV1-9A0A0C4DH69 117 aa12.83□□□□□ -0.36
MSH5-201ENST00000375703 CEACAM18A8MTB9 384 aa12.83□□□□□ -0.36
MSH5-201ENST00000375703 H0YIZ8 118 aa12.83□□□□□ -0.36
MSH5-201ENST00000375703 TOX3O15405 576 aaPredicted RBP12.83□□□□□ -0.36
MSH5-201ENST00000375703 CCL1P22362 96 aa12.83□□□□□ -0.36
MSH5-201ENST00000375703 CBX5P45973 191 aa12.83□□□□□ -0.36
MSH5-201ENST00000375703 DHPSP49366 369 aaPredicted RBP12.83□□□□□ -0.36
MSH5-201ENST00000375703 KCNMB1Q16558 191 aa12.83□□□□□ -0.36
MSH5-201ENST00000375703 RAB18Q9NP72 206 aa12.83□□□□□ -0.36
MSH5-201ENST00000375703 PCDHB16Q9NRJ7 776 aa12.83□□□□□ -0.36
MSH5-201ENST00000375703 SLC39A1Q9NY26 324 aa12.83□□□□□ -0.36
MSH5-201ENST00000375703 PRR13Q9NZ81 148 aa12.83□□□□□ -0.36
MSH5-201ENST00000375703 TMEM218A2RU14 115 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 MFNGO00587 321 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 MBTPS2O43462 519 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 ATG12O94817 140 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 AKR1C2P52895 323 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 GRB2P62993 217 aaKnown RBP12.82□□□□□ -0.36
MSH5-201ENST00000375703 NAAAQ02083 359 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 AKR1C1Q04828 323 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 HIST3H3Q16695 136 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 ZSCAN4Q8NAM6 433 aaPredicted RBP12.82□□□□□ -0.36
MSH5-201ENST00000375703 CLRN3Q8NCR9 226 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 SLC30A7Q8NEW0 376 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 OR14K1Q8NGZ2 314 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 SLC22A8Q8TCC7 542 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 RTBDNQ9BSG5 229 aaPredicted RBP12.82□□□□□ -0.36
MSH5-201ENST00000375703 PHF7Q9BWX1 381 aaPredicted RBP12.82□□□□□ -0.36
MSH5-201ENST00000375703 SLC6A15Q9H2J7 730 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 METTL8Q9H825 291 aaKnown RBP12.82□□□□□ -0.36
MSH5-201ENST00000375703 PHF3Q92576 2039 aaKnown RBP12.82□□□□□ -0.36
MSH5-201ENST00000375703 PRUNE2Q8WUY3 3088 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 SDCBPO00560 298 aaPredicted RBP12.82□□□□□ -0.36
MSH5-201ENST00000375703 TLX3O43711 291 aaPredicted RBP12.82□□□□□ -0.36
MSH5-201ENST00000375703 KLK2P20151 261 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 FPR2P25090 351 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 CCDC157Q569K6 752 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 NKAPLQ5M9Q1 402 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 PNLDC1Q8NA58 520 aaKnown RBP12.82□□□□□ -0.36
MSH5-201ENST00000375703 OR5D18Q8NGL1 313 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 RNF141Q8WVD5 230 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 DNASE2BQ8WZ79 361 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 PGAM5Q96HS1 289 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 TSNAXQ99598 290 aaKnown RBP12.82□□□□□ -0.36
MSH5-201ENST00000375703 CRB3Q9BUF7 120 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 ZNF416Q9BWM5 594 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 CYTL1Q9NRR1 136 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 E9PLN8 166 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 GUCA1AP43080 201 aaPredicted RBP12.82□□□□□ -0.36
MSH5-201ENST00000375703 CLDN17P56750 224 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 SUPT4H1P63272 117 aaKnown RBP12.82□□□□□ -0.36
MSH5-201ENST00000375703 CSNK2A1P68400 391 aaPredicted RBP12.82□□□□□ -0.36
MSH5-201ENST00000375703 ECH1Q13011 328 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 KISS1Q15726 138 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 C1QL2Q7Z5L3 287 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 FAM89BQ8N5H3 189 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 CSNK2A3Q8NEV1 391 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 OR13G1Q8NGZ3 307 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 SSC4DQ8WTU2 575 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 NPRL2Q8WTW4 380 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 DEFB126Q9BYW3 111 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 RARRES3Q9UL19 164 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 MRPS17Q9Y2R5 130 aaKnown RBP12.82□□□□□ -0.36
MSH5-201ENST00000375703 B3GALT1Q9Y5Z6 326 aa12.82□□□□□ -0.36
MSH5-201ENST00000375703 HTR3BO95264 441 aa12.81□□□□□ -0.36
MSH5-201ENST00000375703 CD79AP11912 226 aa12.81□□□□□ -0.36
MSH5-201ENST00000375703 ICAM2P13598 275 aa12.81□□□□□ -0.36
MSH5-201ENST00000375703 GLRA1P23415 457 aa12.81□□□□□ -0.36
MSH5-201ENST00000375703 PTGFRP43088 359 aa12.81□□□□□ -0.36
MSH5-201ENST00000375703 SNU13P55769 128 aaKnown RBP12.81□□□□□ -0.36
MSH5-201ENST00000375703 ANKRD55Q3KP44 614 aa12.81□□□□□ -0.36
MSH5-201ENST00000375703 WDSUB1Q8N9V3 476 aa12.81□□□□□ -0.36
MSH5-201ENST00000375703 TMED6Q8WW62 240 aa12.81□□□□□ -0.36
MSH5-201ENST00000375703 LIN37Q96GY3 246 aaPredicted RBP12.81□□□□□ -0.36
MSH5-201ENST00000375703 TMEM100Q9NV29 134 aa12.81□□□□□ -0.36
MSH5-201ENST00000375703 HDGFL3Q9Y3E1 203 aa12.81□□□□□ -0.36
MSH5-201ENST00000375703 SDK1Q7Z5N4 2213 aa12.81□□□□□ -0.36
MSH5-201ENST00000375703 C5orf63A6NC05 138 aa12.81□□□□□ -0.36
MSH5-201ENST00000375703 AQP7P3A6NL99 342 aa12.81□□□□□ -0.36
MSH5-201ENST00000375703 IL32P24001 234 aa12.81□□□□□ -0.36
MSH5-201ENST00000375703 BLVRBP30043 206 aaPredicted RBP12.81□□□□□ -0.36
MSH5-201ENST00000375703 PABPC1L2AQ5JQF8 200 aa12.81□□□□□ -0.36
MSH5-201ENST00000375703 AADACL3Q5VUY0 350 aa12.81□□□□□ -0.36
MSH5-201ENST00000375703 PRSS54Q6PEW0 395 aa12.81□□□□□ -0.36
MSH5-201ENST00000375703 PEG10Q86TG7 708 aaKnown RBP12.81□□□□□ -0.36
MSH5-201ENST00000375703 OR5T2Q8NGG2 359 aa12.81□□□□□ -0.36
MSH5-201ENST00000375703 SLC25A43Q8WUT9 341 aaPredicted RBP12.81□□□□□ -0.36
MSH5-201ENST00000375703 RASL10BQ96S79 203 aa12.81□□□□□ -0.36
MSH5-201ENST00000375703 ZNF160Q9HCG1 818 aa12.81□□□□□ -0.36
MSH5-201ENST00000375703 OR5AC2Q9NZP5 309 aa12.81□□□□□ -0.36
MSH5-201ENST00000375703 EXPH5Q8NEV8 1989 aa12.8□□□□□ -0.36
MSH5-201ENST00000375703 F5H5K5 113 aa12.8□□□□□ -0.36
MSH5-201ENST00000375703 ABCD4O14678 606 aa12.8□□□□□ -0.36
MSH5-201ENST00000375703 EIF1P41567 113 aaKnown RBP12.8□□□□□ -0.36
MSH5-201ENST00000375703 SLC35A1P78382 337 aa12.8□□□□□ -0.36
MSH5-201ENST00000375703 LCN10Q6JVE6 187 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms