RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 PPT1P50897 306 aa18.7■□□□□ 0.58
UPF3A-202ENST00000375299 RHBDD1Q8TEB9 315 aa18.7■□□□□ 0.58
UPF3A-202ENST00000375299 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.7■□□□□ 0.58
UPF3A-202ENST00000375299 ARHGAP5-AS1Q96IT6 56 aa18.7■□□□□ 0.58
UPF3A-202ENST00000375299 PMS2P1A4D2B8 440 aa18.7■□□□□ 0.58
UPF3A-202ENST00000375299 FIGNL2A6NMB9 653 aa18.7■□□□□ 0.58
UPF3A-202ENST00000375299 IGHV4-34P06331 123 aa18.7■□□□□ 0.58
UPF3A-202ENST00000375299 THEGLP0DJG4 465 aa18.7■□□□□ 0.58
UPF3A-202ENST00000375299 GLRA1P23415 457 aa18.7■□□□□ 0.58
UPF3A-202ENST00000375299 ARFRP1Q13795 201 aa18.7■□□□□ 0.58
UPF3A-202ENST00000375299 HMGN3Q15651 99 aa18.7■□□□□ 0.58
UPF3A-202ENST00000375299 FOXRED2Q8IWF2 684 aa18.7■□□□□ 0.58
UPF3A-202ENST00000375299 OR56B1Q8NGI3 324 aa18.7■□□□□ 0.58
UPF3A-202ENST00000375299 TCEAL3Q969E4 200 aa18.7■□□□□ 0.58
UPF3A-202ENST00000375299 ZNF304Q9HCX3 659 aa18.7■□□□□ 0.58
UPF3A-202ENST00000375299 RPS10P5Q9NQ39 176 aa18.7■□□□□ 0.58
UPF3A-202ENST00000375299 A0A1W2PP11 408 aa18.69■□□□□ 0.58
UPF3A-202ENST00000375299 NPIPB13A6NJU9 1138 aa18.69■□□□□ 0.58
UPF3A-202ENST00000375299 NPIPB4C9JG80 1138 aa18.69■□□□□ 0.58
UPF3A-202ENST00000375299 SFTPBP07988 381 aa18.69■□□□□ 0.58
UPF3A-202ENST00000375299 OR8U9P0C7N5 309 aa18.69■□□□□ 0.58
UPF3A-202ENST00000375299 ZNF708P17019 499 aa18.69■□□□□ 0.58
UPF3A-202ENST00000375299 AKR1C3P42330 323 aa18.69■□□□□ 0.58
UPF3A-202ENST00000375299 OR3A2P47893 321 aa18.69■□□□□ 0.58
UPF3A-202ENST00000375299 HSF1Q00613 529 aa18.69■□□□□ 0.58
UPF3A-202ENST00000375299 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.69■□□□□ 0.58
UPF3A-202ENST00000375299 OR2A2Q6IF42 318 aa18.69■□□□□ 0.58
UPF3A-202ENST00000375299 TTLL10Q6ZVT0 673 aa18.69■□□□□ 0.58
UPF3A-202ENST00000375299 H1FNTQ75WM6 255 aaPredicted RBP18.69■□□□□ 0.58
UPF3A-202ENST00000375299 ZNF561Q8N587 486 aa18.69■□□□□ 0.58
UPF3A-202ENST00000375299 OR8U1Q8NH10 309 aa18.69■□□□□ 0.58
UPF3A-202ENST00000375299 C8orf33Q9H7E9 229 aaPredicted RBP18.69■□□□□ 0.58
UPF3A-202ENST00000375299 GSN-AS1Q9NRJ2 163 aa18.69■□□□□ 0.58
UPF3A-202ENST00000375299 PPM1FP49593 454 aaPredicted RBP18.69■□□□□ 0.58
UPF3A-202ENST00000375299 LYPD6BQ8NI32 183 aa18.69■□□□□ 0.58
UPF3A-202ENST00000375299 SECTM1Q8WVN6 248 aa18.69■□□□□ 0.58
UPF3A-202ENST00000375299 ARL5BQ96KC2 179 aa18.69■□□□□ 0.58
UPF3A-202ENST00000375299 NAA11Q9BSU3 229 aaPredicted RBP18.69■□□□□ 0.58
UPF3A-202ENST00000375299 CNTNAP3Q9BZ76 1288 aa18.69■□□□□ 0.58
UPF3A-202ENST00000375299 MOB1AQ9H8S9 216 aa18.69■□□□□ 0.58
UPF3A-202ENST00000375299 B3GALT5Q9Y2C3 310 aa18.69■□□□□ 0.58
UPF3A-202ENST00000375299 IGHV5-51A0A0C4DH38 117 aa18.68■□□□□ 0.58
UPF3A-202ENST00000375299 C10orf142B7Z368 130 aa18.68■□□□□ 0.58
UPF3A-202ENST00000375299 SDCBPO00560 298 aaPredicted RBP18.68■□□□□ 0.58
UPF3A-202ENST00000375299 MT-ND4LP03901 98 aa18.68■□□□□ 0.58
UPF3A-202ENST00000375299 GAPDHP04406 335 aaKnown RBP18.68■□□□□ 0.58
UPF3A-202ENST00000375299 AGAP20933 346 aa18.68■□□□□ 0.58
UPF3A-202ENST00000375299 RPL12P30050 165 aaKnown RBP18.68■□□□□ 0.58
UPF3A-202ENST00000375299 EFNA3P52797 238 aa18.68■□□□□ 0.58
UPF3A-202ENST00000375299 NSUN5P2Q63ZY6 315 aa18.68■□□□□ 0.58
UPF3A-202ENST00000375299 MFSD8Q8NHS3 518 aa18.68■□□□□ 0.58
UPF3A-202ENST00000375299 TMEM234Q8WY98 164 aa18.68■□□□□ 0.58
UPF3A-202ENST00000375299 SEBOXQ9HB31 216 aaPredicted RBP18.68■□□□□ 0.58
UPF3A-202ENST00000375299 CUTCQ9NTM9 273 aa18.68■□□□□ 0.58
UPF3A-202ENST00000375299 FBXL17Q9UF56 701 aa18.68■□□□□ 0.58
UPF3A-202ENST00000375299 CRTAPO75718 401 aaPredicted RBP18.68■□□□□ 0.58
UPF3A-202ENST00000375299 GFERP55789 205 aa18.68■□□□□ 0.58
UPF3A-202ENST00000375299 CSNK2A1P68400 391 aaPredicted RBP18.68■□□□□ 0.58
UPF3A-202ENST00000375299 TLE3Q04726 772 aa18.68■□□□□ 0.58
UPF3A-202ENST00000375299 FAM189A2Q15884 450 aa18.68■□□□□ 0.58
UPF3A-202ENST00000375299 COMMD2Q86X83 199 aa18.68■□□□□ 0.58
UPF3A-202ENST00000375299 CSNK2A3Q8NEV1 391 aa18.68■□□□□ 0.58
UPF3A-202ENST00000375299 SLC39A7Q92504 469 aa18.68■□□□□ 0.58
UPF3A-202ENST00000375299 EMG1Q92979 244 aaKnown RBP18.68■□□□□ 0.58
UPF3A-202ENST00000375299 URM1Q9BTM9 101 aaKnown RBP18.68■□□□□ 0.58
UPF3A-202ENST00000375299 LRRC61Q9BV99 259 aa18.68■□□□□ 0.58
UPF3A-202ENST00000375299 ST6GALNAC5Q9BVH7 336 aa18.68■□□□□ 0.58
UPF3A-202ENST00000375299 EHFQ9NZC4 300 aa18.68■□□□□ 0.58
UPF3A-202ENST00000375299 K7EPK0 472 aa18.67■□□□□ 0.58
UPF3A-202ENST00000375299 JTBO76095 146 aa18.67■□□□□ 0.58
UPF3A-202ENST00000375299 HCKP08631 526 aa18.67■□□□□ 0.58
UPF3A-202ENST00000375299 TAS2R46P59540 309 aa18.67■□□□□ 0.58
UPF3A-202ENST00000375299 POLR2GP62487 172 aaKnown RBP eCLIP18.67■□□□□ 0.58
UPF3A-202ENST00000375299 SPEM2Q0P670 501 aa18.67■□□□□ 0.58
UPF3A-202ENST00000375299 FAM71E2Q8N5Q1 922 aa18.67■□□□□ 0.58
UPF3A-202ENST00000375299 TGM7Q96PF1 710 aa18.67■□□□□ 0.58
UPF3A-202ENST00000375299 SOX7Q9BT81 388 aa18.67■□□□□ 0.58
UPF3A-202ENST00000375299 CHST11Q9NPF2 352 aa18.67■□□□□ 0.58
UPF3A-202ENST00000375299 COPS7AQ9UBW8 275 aa18.67■□□□□ 0.58
UPF3A-202ENST00000375299 DHPSP49366 369 aaPredicted RBP18.67■□□□□ 0.58
UPF3A-202ENST00000375299 SNU13P55769 128 aaKnown RBP18.67■□□□□ 0.58
UPF3A-202ENST00000375299 HSD11B2P80365 405 aa18.67■□□□□ 0.58
UPF3A-202ENST00000375299 AWAT1Q58HT5 328 aa18.67■□□□□ 0.58
UPF3A-202ENST00000375299 FAM209BQ5JX69 171 aa18.67■□□□□ 0.58
UPF3A-202ENST00000375299 OPN5Q6U736 354 aa18.67■□□□□ 0.58
UPF3A-202ENST00000375299 ABHD12BQ7Z5M8 362 aaPredicted RBP18.67■□□□□ 0.58
UPF3A-202ENST00000375299 LINC00469Q8N7U9 141 aa18.67■□□□□ 0.58
UPF3A-202ENST00000375299 DAZLQ92904 295 aaKnown RBP18.67■□□□□ 0.58
UPF3A-202ENST00000375299 C5orf34Q96MH7 638 aa18.67■□□□□ 0.58
UPF3A-202ENST00000375299 NIT2Q9NQR4 276 aa18.67■□□□□ 0.58
UPF3A-202ENST00000375299 C1orf123Q9NWV4 160 aa18.67■□□□□ 0.58
UPF3A-202ENST00000375299 ATXN7L1Q9ULK2 861 aaPredicted RBP18.67■□□□□ 0.58
UPF3A-202ENST00000375299 SPTBN5Q9NRC6 3674 aaKnown RBP18.66■□□□□ 0.58
UPF3A-202ENST00000375299 A0A1W2PPE3 182 aa18.66■□□□□ 0.58
UPF3A-202ENST00000375299 ADAM10O14672 748 aa18.66■□□□□ 0.58
UPF3A-202ENST00000375299 FCGR2CP31995 323 aa18.66■□□□□ 0.58
UPF3A-202ENST00000375299 PTGER4P35408 488 aa18.66■□□□□ 0.58
UPF3A-202ENST00000375299 BIDP55957 195 aa18.66■□□□□ 0.58
UPF3A-202ENST00000375299 IAH1Q2TAA2 248 aaPredicted RBP18.66■□□□□ 0.58
UPF3A-202ENST00000375299 KDF1Q8NAX2 398 aaPredicted RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms