RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 ZNF343Q6P1L6 599 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 CD200R1LQ6Q8B3 271 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 DUX4L9Q6RFH8 374 aaPredicted RBP7.01□□□□□ -1.29
USP48-203ENST00000374732 GLDNQ6ZMI3 551 aaPredicted RBP7.01□□□□□ -1.29
USP48-203ENST00000374732 COX15Q7KZN9 410 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 GOLGA7Q7Z5G4 137 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 GPSM1Q86YR5 675 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 IGDCC3Q8IVU1 814 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 ZNF676Q8N7Q3 588 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 B3GALNT2Q8NCR0 500 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 SLC30A7Q8NEW0 376 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 OR52L1Q8NGH7 329 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 OR52E4Q8NGH9 312 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 OR4D11Q8NGI4 311 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 GFM1Q96RP9 751 aaKnown RBP7.01□□□□□ -1.29
USP48-203ENST00000374732 SULT4A1Q9BR01 284 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 SELENOIQ9C0D9 397 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 RAB6CQ9H0N0 254 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 FAM234AQ9H0X4 552 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 FNDC4Q9H6D8 234 aaPredicted RBP7.01□□□□□ -1.29
USP48-203ENST00000374732 SFXN1Q9H9B4 322 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 SLC7A7Q9UM01 511 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 EMC9Q9Y3B6 208 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 COX11Q9Y6N1 276 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 A0A1B0GU03 582 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 CTSDP07339 412 aaPredicted RBP7.01□□□□□ -1.29
USP48-203ENST00000374732 ABOP16442 354 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 RAB5AP20339 215 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 LMO2P25791 158 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 RPS15AP62244 130 aaKnown RBP7.01□□□□□ -1.29
USP48-203ENST00000374732 TLE3Q04726 772 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 ENPP7Q6UWV6 458 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 TIFABQ6ZNK6 161 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 SLC30A8Q8IWU4 369 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 INO80EQ8NBZ0 244 aaPredicted RBP7.01□□□□□ -1.29
USP48-203ENST00000374732 C16orf52Q8NHV5 167 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 ARL11Q969Q4 196 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 LINC00470Q9BZP3 86 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 AMBRA1Q9C0C7 1298 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 ARL6Q9H0F7 186 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 LRTM1Q9HBL6 345 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 HINT3Q9NQE9 182 aaKnown RBP7.01□□□□□ -1.29
USP48-203ENST00000374732 CLN6Q9NWW5 311 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 FOXA2Q9Y261 457 aaPredicted RBP7.01□□□□□ -1.29
USP48-203ENST00000374732 IGHV2OR16-5A0A0B4J2B6 119 aa7□□□□□ -1.29
USP48-203ENST00000374732 RNF212BA8MTL3 300 aa7□□□□□ -1.29
USP48-203ENST00000374732 DVL1O14640 695 aa7□□□□□ -1.29
USP48-203ENST00000374732 TSPAN15O95858 294 aa7□□□□□ -1.29
USP48-203ENST00000374732 MMP7P09237 267 aaPredicted RBP7□□□□□ -1.29
USP48-203ENST00000374732 GGT1P19440 569 aa7□□□□□ -1.29
USP48-203ENST00000374732 MPZP25189 248 aa7□□□□□ -1.29
USP48-203ENST00000374732 PRLHRP49683 370 aa7□□□□□ -1.29
USP48-203ENST00000374732 SESN2P58004 480 aaPredicted RBP7□□□□□ -1.29
USP48-203ENST00000374732 HIST1H1AQ02539 215 aaPredicted RBP7□□□□□ -1.29
USP48-203ENST00000374732 RBM39Q14498 530 aaKnown RBP7□□□□□ -1.29
USP48-203ENST00000374732 ZNF266Q14584 549 aa7□□□□□ -1.29
USP48-203ENST00000374732 SPIN4Q56A73 249 aa7□□□□□ -1.29
USP48-203ENST00000374732 PRSS54Q6PEW0 395 aa7□□□□□ -1.29
USP48-203ENST00000374732 NIT1Q86X76 327 aa7□□□□□ -1.29
USP48-203ENST00000374732 TDHQ8IZJ6 230 aa7□□□□□ -1.29
USP48-203ENST00000374732 HIST3H2BBQ8N257 126 aa7□□□□□ -1.29
USP48-203ENST00000374732 MDS2Q8NDY4 140 aa7□□□□□ -1.29
USP48-203ENST00000374732 FNDC9Q8TBE3 224 aa7□□□□□ -1.29
USP48-203ENST00000374732 SCRN2Q96FV2 425 aa7□□□□□ -1.29
USP48-203ENST00000374732 IL17FQ96PD4 163 aa7□□□□□ -1.29
USP48-203ENST00000374732 CLCC1Q96S66 551 aa7□□□□□ -1.29
USP48-203ENST00000374732 KCTD15Q96SI1 283 aaPredicted RBP7□□□□□ -1.29
USP48-203ENST00000374732 PKMYT1Q99640 499 aa7□□□□□ -1.29
USP48-203ENST00000374732 TIMP4Q99727 224 aa7□□□□□ -1.29
USP48-203ENST00000374732 NRIP2Q9BQI9 281 aa7□□□□□ -1.29
USP48-203ENST00000374732 ACTR3CQ9C0K3 210 aaPredicted RBP7□□□□□ -1.29
USP48-203ENST00000374732 ZBTB26Q9HCK0 441 aa7□□□□□ -1.29
USP48-203ENST00000374732 SLC7A10Q9NS82 523 aa7□□□□□ -1.29
USP48-203ENST00000374732 JKAMPQ9P055 326 aa7□□□□□ -1.29
USP48-203ENST00000374732 PLEKHB1Q9UF11 243 aaPredicted RBP7□□□□□ -1.29
USP48-203ENST00000374732 ZNF222Q9UK12 451 aa7□□□□□ -1.29
USP48-203ENST00000374732 HES2Q9Y543 173 aa7□□□□□ -1.29
USP48-203ENST00000374732 WSB1Q9Y6I7 421 aa7□□□□□ -1.29
USP48-203ENST00000374732 A0A087WV48 116 aa7□□□□□ -1.29
USP48-203ENST00000374732 A0A1W2PRE2 83 aa7□□□□□ -1.29
USP48-203ENST00000374732 MAP1LC3B2A6NCE7 125 aa7□□□□□ -1.29
USP48-203ENST00000374732 FAM159BA6NKW6 160 aa7□□□□□ -1.29
USP48-203ENST00000374732 P2RX6O15547 441 aa7□□□□□ -1.29
USP48-203ENST00000374732 ORC5O43913 435 aa7□□□□□ -1.29
USP48-203ENST00000374732 SEMA4FO95754 770 aa7□□□□□ -1.29
USP48-203ENST00000374732 SSTR4P31391 388 aa7□□□□□ -1.29
USP48-203ENST00000374732 SLC10A2Q12908 348 aaPredicted RBP7□□□□□ -1.29
USP48-203ENST00000374732 PAFAH1B3Q15102 231 aaKnown RBP7□□□□□ -1.29
USP48-203ENST00000374732 NCBP2-AS2Q69YL0 99 aa7□□□□□ -1.29
USP48-203ENST00000374732 PLAG1Q6DJT9 500 aa7□□□□□ -1.29
USP48-203ENST00000374732 TMEM92Q6UXU6 159 aa7□□□□□ -1.29
USP48-203ENST00000374732 OR4N2Q8NGD1 307 aa7□□□□□ -1.29
USP48-203ENST00000374732 ACOX2Q99424 681 aa7□□□□□ -1.29
USP48-203ENST00000374732 DPH2Q9BQC3 489 aaPredicted RBP7□□□□□ -1.29
USP48-203ENST00000374732 NDFIP1Q9BT67 221 aa7□□□□□ -1.29
USP48-203ENST00000374732 MAP1LC3BQ9GZQ8 125 aa7□□□□□ -1.29
USP48-203ENST00000374732 C3orf14Q9HBI5 128 aa7□□□□□ -1.29
USP48-203ENST00000374732 RETNQ9HD89 108 aa7□□□□□ -1.29
USP48-203ENST00000374732 GPATCH2LQ9NWQ4 482 aa7□□□□□ -1.29
USP48-203ENST00000374732 FLRT1Q9NZU1 646 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms