RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 HLA-AP01891 365 aaKnown RBP9.55□□□□□ -0.88
CXCL12-203ENST00000374429 RAF1P04049 648 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 CYB561P49447 251 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 DUSP3P51452 185 aaPredicted RBP9.55□□□□□ -0.88
CXCL12-203ENST00000374429 RAP1BP61224 184 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 RAP1AP62834 184 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 EGR3Q06889 387 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 FGL1Q08830 312 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 FAM74A1Q5RGS3 127 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 DCAF12L2Q5VW00 463 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 AAED1Q7RTV5 226 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 C1QL2Q7Z5L3 287 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 GPR137CQ8N3F9 429 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 ST8SIA1Q92185 356 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 KCNJ15Q99712 375 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 PAPOLGQ9BWT3 736 aaKnown RBP9.55□□□□□ -0.88
CXCL12-203ENST00000374429 COA4Q9NYJ1 87 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 B3GALT5Q9Y2C3 310 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 MRPS28Q9Y2Q9 187 aaKnown RBP9.55□□□□□ -0.88
CXCL12-203ENST00000374429 LHFPL6Q9Y693 200 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 FTCDNL1E5RQL4 147 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 M0R233 179 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 SCGB1D2O95969 90 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 FAUP35544 74 aaKnown RBP9.55□□□□□ -0.88
CXCL12-203ENST00000374429 RRADP55042 308 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 ZXDAP98168 799 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 NLRC3Q7RTR2 1065 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 KMT5CQ86Y97 462 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 MUC20Q8N307 709 aaPredicted RBP9.55□□□□□ -0.88
CXCL12-203ENST00000374429 DUSP18Q8NEJ0 188 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 FNDC9Q8TBE3 224 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 KIAA1143Q96AT1 154 aaPredicted RBP9.55□□□□□ -0.88
CXCL12-203ENST00000374429 ZNF581Q9P0T4 197 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 B3GAT1Q9P2W7 334 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 CHCHD2Q9Y6H1 151 aaPredicted RBP9.55□□□□□ -0.88
CXCL12-203ENST00000374429 ZNF318Q5VUA4 2279 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 CCDC187A0A096LP49 1063 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 ZNF208O43345 1280 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 CFDP00746 253 aaPredicted RBP9.55□□□□□ -0.88
CXCL12-203ENST00000374429 HLA-HP01893 362 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 RLN2P04090 185 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 BLVRBP30043 206 aaPredicted RBP9.55□□□□□ -0.88
CXCL12-203ENST00000374429 IL10RAQ13651 578 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 KLF9Q13886 244 aaPredicted RBP9.55□□□□□ -0.88
CXCL12-203ENST00000374429 GGTLC2Q14390 218 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 EMC4Q5J8M3 183 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 ASPHD2Q6ICH7 369 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 EXD3Q8N9H8 876 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 LURAP1Q96LR2 239 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 CCNL2Q96S94 520 aaPredicted RBP9.55□□□□□ -0.88
CXCL12-203ENST00000374429 SSX3Q99909 188 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 SRXN1Q9BYN0 137 aa9.55□□□□□ -0.88
CXCL12-203ENST00000374429 ZNF629Q9UEG4 869 aaPredicted RBP9.55□□□□□ -0.88
CXCL12-203ENST00000374429 PLCE1Q9P212 2302 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 OR6C76A6NM76 312 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 GLSO94925 669 aaPredicted RBP9.54□□□□□ -0.88
CXCL12-203ENST00000374429 SNAPINO95295 136 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 CSTBP04080 98 aaKnown RBP9.54□□□□□ -0.88
CXCL12-203ENST00000374429 SFTPBP07988 381 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 AKR1C2P52895 323 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 MTCP1P56278 107 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 AKR1C1Q04828 323 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 CEACAM16Q2WEN9 425 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 TMEM244Q5VVB8 128 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 DPPA2Q7Z7J5 298 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 OR2Y1Q8NGV0 311 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 RNF166Q96A37 237 aaPredicted RBP9.54□□□□□ -0.88
CXCL12-203ENST00000374429 KCNK17Q96T54 332 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 SH3BGRL2Q9UJC5 107 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 ABCA1O95477 2261 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 IGHV1-45A0A0A0MS14 117 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 TXNL1O43396 289 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 HOXB5P09067 269 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 VSIG10L2P0DP72 767 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 COX6A1P12074 109 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 MAGEA5P43359 124 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 FOXG1P55316 489 aaPredicted RBP9.54□□□□□ -0.88
CXCL12-203ENST00000374429 HNF4GQ14541 408 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 CLLU1Q5K131 121 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 TIGD3Q6B0B8 471 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 C6orf15Q6UXA7 325 aaPredicted RBP9.54□□□□□ -0.88
CXCL12-203ENST00000374429 LIX1LQ8IVB5 337 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 MCEMP1Q8IX19 187 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 GABRG1Q8N1C3 465 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 C9orf62Q8N4C0 152 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 OR1M1Q8NGA1 313 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 OR5T2Q8NGG2 359 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 OR10S1Q8NGN2 331 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 ASB17Q8WXJ9 295 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 HOXB13Q92826 284 aaPredicted RBP9.54□□□□□ -0.88
CXCL12-203ENST00000374429 MRGPRX4Q96LA9 322 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 CMTM3Q96MX0 182 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 SOSTQ9BQB4 213 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 GSX2Q9BZM3 304 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 RAB33BQ9H082 229 aa9.54□□□□□ -0.88
CXCL12-203ENST00000374429 PARP12Q9H0J9 701 aaKnown RBP9.54□□□□□ -0.88
CXCL12-203ENST00000374429 GPN1Q9HCN4 374 aaPredicted RBP9.54□□□□□ -0.88
CXCL12-203ENST00000374429 PINLYPA6NC86 204 aa9.53□□□□□ -0.88
CXCL12-203ENST00000374429 EIF1BO60739 113 aaKnown RBP9.53□□□□□ -0.88
CXCL12-203ENST00000374429 NPIPB7O75200 414 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms