RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 BLOC1S1P78537 153 aa10.08□□□□□ -0.8
PTPN20-204ENST00000374346 DCDP81605 110 aaKnown RBP10.08□□□□□ -0.8
PTPN20-204ENST00000374346 SURF2Q15527 256 aaPredicted RBP10.08□□□□□ -0.8
PTPN20-204ENST00000374346 ZNF585AQ6P3V2 769 aa10.08□□□□□ -0.8
PTPN20-204ENST00000374346 TMEM71Q6P5X7 295 aa10.08□□□□□ -0.8
PTPN20-204ENST00000374346 HAGHLQ6PII5 290 aaPredicted RBP10.08□□□□□ -0.8
PTPN20-204ENST00000374346 DRAM2Q6UX65 266 aa10.08□□□□□ -0.8
PTPN20-204ENST00000374346 IL34Q6ZMJ4 242 aa10.08□□□□□ -0.8
PTPN20-204ENST00000374346 CSNK2A3Q8NEV1 391 aa10.08□□□□□ -0.8
PTPN20-204ENST00000374346 OR2I1PQ8NGU4 316 aa10.08□□□□□ -0.8
PTPN20-204ENST00000374346 C1orf147Q96MC9 270 aaPredicted RBP10.08□□□□□ -0.8
PTPN20-204ENST00000374346 CNTNAP3BQ96NU0 1288 aa10.08□□□□□ -0.8
PTPN20-204ENST00000374346 RNF126Q9BV68 326 aa10.08□□□□□ -0.8
PTPN20-204ENST00000374346 ST6GALNAC5Q9BVH7 336 aa10.08□□□□□ -0.8
PTPN20-204ENST00000374346 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.08□□□□□ -0.8
PTPN20-204ENST00000374346 HPF1Q9NWY4 346 aa10.08□□□□□ -0.8
PTPN20-204ENST00000374346 DNAJB11Q9UBS4 358 aa10.08□□□□□ -0.8
PTPN20-204ENST00000374346 NDRG3Q9UGV2 375 aa10.08□□□□□ -0.8
PTPN20-204ENST00000374346 C14orf166Q9Y224 244 aaKnown RBP10.08□□□□□ -0.8
PTPN20-204ENST00000374346 ADAMTS20P59510 1910 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 FAM74A7A6NL05 159 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 TAAR5O14804 337 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 SNAPINO95295 136 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 CD79AP11912 226 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 LYL1P12980 280 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 SNU13P55769 128 aaKnown RBP10.07□□□□□ -0.8
PTPN20-204ENST00000374346 FOXL2P58012 376 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 LSM6P62312 80 aaKnown RBP10.07□□□□□ -0.8
PTPN20-204ENST00000374346 SLC35A1P78382 337 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 SMAD4Q13485 552 aaKnown RBP10.07□□□□□ -0.8
PTPN20-204ENST00000374346 PPA1Q15181 289 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 CHRFAM7AQ494W8 412 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 FAM74A3Q4VXF1 159 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 CPEB2Q7Z5Q1 589 aaKnown RBP10.07□□□□□ -0.8
PTPN20-204ENST00000374346 ZSCAN4Q8NAM6 433 aaPredicted RBP10.07□□□□□ -0.8
PTPN20-204ENST00000374346 OR10G3Q8NGC4 313 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 POC1BQ8TC44 478 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 EMG1Q92979 244 aaKnown RBP10.07□□□□□ -0.8
PTPN20-204ENST00000374346 PGAM5Q96HS1 289 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 C2orf50Q96LR7 162 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 NECAB3Q96P71 396 aaPredicted RBP10.07□□□□□ -0.8
PTPN20-204ENST00000374346 AQP10Q96PS8 301 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 ABCA7Q8IZY2 2146 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 LOC102725191A0A1B0GVB3 256 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 A0A1W2PNR3 127 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 ZNF705EA8MWA4 302 aaPredicted RBP10.07□□□□□ -0.8
PTPN20-204ENST00000374346 BCAT2O15382 392 aaPredicted RBP10.07□□□□□ -0.8
PTPN20-204ENST00000374346 SCRG1O75711 98 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 OR2J2O76002 312 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 APOC1P02654 83 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 PTGFRP43088 359 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 DHPSP49366 369 aaPredicted RBP10.07□□□□□ -0.8
PTPN20-204ENST00000374346 TMEM50BP56557 158 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 SCRN3Q0VDG4 424 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 KISS1Q15726 138 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 NSUN5P2Q63ZY6 315 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 LHFPL1Q86WI0 220 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 SLC25A45Q8N413 288 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 FAM89BQ8N5H3 189 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 GJC3Q8NFK1 279 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 OR10Z1Q8NGY1 313 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 TMED6Q8WW62 240 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 TMEM230Q96A57 120 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 OR6C1Q96RD1 312 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 EHFQ9NZC4 300 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 CA14Q9ULX7 337 aa10.07□□□□□ -0.8
PTPN20-204ENST00000374346 AQP7P3A6NL99 342 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 KCNAB3O43448 404 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 OPN1LWP04000 364 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 CPT2P23786 658 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 THBS4P35443 961 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 ALDH3B1P43353 468 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 P2RY4P51582 365 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 MFAP5Q13361 173 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 STK11Q15831 433 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 ZNF239Q16600 458 aaKnown RBP10.06□□□□□ -0.8
PTPN20-204ENST00000374346 HIST3H3Q16695 136 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 OR2M3Q8NG83 312 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 OR14K1Q8NGZ2 314 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 RHBDD1Q8TEB9 315 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 PP6455Q8WZ26 134 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 SAT2Q96F10 170 aaPredicted RBP10.06□□□□□ -0.8
PTPN20-204ENST00000374346 ZNF160Q9HCG1 818 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 PNRC2Q9NPJ4 139 aaKnown RBP10.06□□□□□ -0.8
PTPN20-204ENST00000374346 MLXQ9UH92 298 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 RARRES3Q9UL19 164 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 PRELID3BQ9Y3B1 194 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 GPR31O00270 319 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 TP53I11O14683 189 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 SIGLEC5O15389 551 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 MTRF1O75570 445 aaKnown RBP10.06□□□□□ -0.8
PTPN20-204ENST00000374346 ADAP1O75689 374 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 ICAM2P13598 275 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 PRF1P14222 555 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 ZNF17P17021 662 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 CTSSP25774 331 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 BLVRBP30043 206 aaPredicted RBP10.06□□□□□ -0.8
PTPN20-204ENST00000374346 SFTPDP35247 375 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 SLC6A9P48067 706 aa10.06□□□□□ -0.8
PTPN20-204ENST00000374346 SIGLEC14Q08ET2 396 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms