RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 MMP16P51512 607 aa6.4□□□□□ -1.38
CSMD2-206ENST00000373388 SMAGPQ0VAQ4 97 aa6.4□□□□□ -1.38
CSMD2-206ENST00000373388 LINC00303Q3SY05 128 aa6.4□□□□□ -1.38
CSMD2-206ENST00000373388 SUSD1Q6UWL2 747 aa6.4□□□□□ -1.38
CSMD2-206ENST00000373388 SLC38A5Q8WUX1 472 aa6.4□□□□□ -1.38
CSMD2-206ENST00000373388 GUCD1Q96NT3 240 aa6.4□□□□□ -1.38
CSMD2-206ENST00000373388 FUT9Q9Y231 359 aa6.4□□□□□ -1.38
CSMD2-206ENST00000373388 TMEM131LA2VDJ0 1609 aa6.4□□□□□ -1.38
CSMD2-206ENST00000373388 A0A1W2PPE2 198 aa6.4□□□□□ -1.38
CSMD2-206ENST00000373388 MANSC4A6NHS7 340 aaPredicted RBP6.4□□□□□ -1.38
CSMD2-206ENST00000373388 LRRC3CA6NJW4 275 aa6.4□□□□□ -1.38
CSMD2-206ENST00000373388 GAPDHP04406 335 aaKnown RBP6.4□□□□□ -1.38
CSMD2-206ENST00000373388 HLA-GP17693 338 aa6.4□□□□□ -1.38
CSMD2-206ENST00000373388 ZNF718Q3SXZ3 478 aa6.4□□□□□ -1.38
CSMD2-206ENST00000373388 CYB5R2Q6BCY4 276 aa6.4□□□□□ -1.38
CSMD2-206ENST00000373388 GLIPR1L1Q6UWM5 242 aa6.4□□□□□ -1.38
CSMD2-206ENST00000373388 PLPP6Q8IY26 295 aa6.4□□□□□ -1.38
CSMD2-206ENST00000373388 AP5S1Q9NUS5 200 aa6.4□□□□□ -1.38
CSMD2-206ENST00000373388 CACNA1AO00555 2505 aa6.4□□□□□ -1.38
CSMD2-206ENST00000373388 JMJD7P0C870 316 aa6.4□□□□□ -1.38
CSMD2-206ENST00000373388 TMIGD3P0DMS9 266 aaPredicted RBP6.4□□□□□ -1.38
CSMD2-206ENST00000373388 ATF1P18846 271 aa6.4□□□□□ -1.38
CSMD2-206ENST00000373388 ACVRL1P37023 503 aa6.4□□□□□ -1.38
CSMD2-206ENST00000373388 XCR1P46094 333 aa6.4□□□□□ -1.38
CSMD2-206ENST00000373388 UBE2NP61088 152 aaKnown RBP6.4□□□□□ -1.38
CSMD2-206ENST00000373388 C22orf39Q6P5X5 142 aa6.4□□□□□ -1.38
CSMD2-206ENST00000373388 CELF5Q8N6W0 485 aaKnown RBP6.4□□□□□ -1.38
CSMD2-206ENST00000373388 RNF2Q99496 336 aa6.4□□□□□ -1.38
CSMD2-206ENST00000373388 ROBO1Q9Y6N7 1651 aa6.4□□□□□ -1.39
CSMD2-206ENST00000373388 KLK3P07288 261 aaPredicted RBP6.4□□□□□ -1.39
CSMD2-206ENST00000373388 SYPL2Q5VXT5 272 aa6.4□□□□□ -1.39
CSMD2-206ENST00000373388 MRGPRGQ86SM5 289 aa6.4□□□□□ -1.39
CSMD2-206ENST00000373388 CITED1Q99966 193 aa6.4□□□□□ -1.39
CSMD2-206ENST00000373388 OOEPA6NGQ2 149 aa6.4□□□□□ -1.39
CSMD2-206ENST00000373388 GSTZ1O43708 216 aaPredicted RBP6.4□□□□□ -1.39
CSMD2-206ENST00000373388 B4GALT2O60909 372 aa6.4□□□□□ -1.39
CSMD2-206ENST00000373388 MMABQ96EY8 250 aaPredicted RBP6.4□□□□□ -1.39
CSMD2-206ENST00000373388 CITED2Q99967 270 aaPredicted RBP6.4□□□□□ -1.39
CSMD2-206ENST00000373388 AMBRA1Q9C0C7 1298 aa6.4□□□□□ -1.39
CSMD2-206ENST00000373388 NPIPB9F8W1W9 429 aa6.4□□□□□ -1.39
CSMD2-206ENST00000373388 GPANK1O95872 356 aa6.4□□□□□ -1.39
CSMD2-206ENST00000373388 CD14P08571 375 aa6.4□□□□□ -1.39
CSMD2-206ENST00000373388 SMAD4Q13485 552 aaKnown RBP6.4□□□□□ -1.39
CSMD2-206ENST00000373388 CBLN4Q9NTU7 201 aa6.4□□□□□ -1.39
CSMD2-206ENST00000373388 TRBV11-1A0A0K0K1C0 115 aa6.4□□□□□ -1.39
CSMD2-206ENST00000373388 ZC3H12DA2A288 527 aaKnown RBP6.4□□□□□ -1.39
CSMD2-206ENST00000373388 C11orf94C9JXX5 98 aa6.4□□□□□ -1.39
CSMD2-206ENST00000373388 CYB5R3P00387 301 aaPredicted RBP6.4□□□□□ -1.39
CSMD2-206ENST00000373388 KCNAB1Q14722 419 aa6.4□□□□□ -1.39
CSMD2-206ENST00000373388 RAET1LQ5VY80 246 aa6.4□□□□□ -1.39
CSMD2-206ENST00000373388 HTR3DQ70Z44 454 aa6.4□□□□□ -1.39
CSMD2-206ENST00000373388 CTU1Q7Z7A3 348 aaKnown RBP6.4□□□□□ -1.39
CSMD2-206ENST00000373388 KLHDC8AQ8IYD2 350 aa6.4□□□□□ -1.39
CSMD2-206ENST00000373388 F2RL3Q96RI0 385 aa6.4□□□□□ -1.39
CSMD2-206ENST00000373388 MAGT1Q9H0U3 335 aa6.4□□□□□ -1.39
CSMD2-206ENST00000373388 OR51B4Q9Y5P0 310 aa6.4□□□□□ -1.39
CSMD2-206ENST00000373388 TNFSF11O14788 317 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 EGR3Q06889 387 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 PDLIM5Q96HC4 596 aaKnown RBP6.39□□□□□ -1.39
CSMD2-206ENST00000373388 MBOAT4Q96T53 435 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 ELNP15502 786 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 SHC2P98077 582 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 SLC25A19Q9HC21 320 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 EMC9Q9Y3B6 208 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 RGPD2P0DJD1 1756 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 ZAR1LA6NP61 321 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 DCTDP32321 178 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 PRRX1P54821 245 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 C21orf58P58505 322 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 ID2Q02363 134 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 FAM78BQ5VT40 261 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 GPR32P1Q8NGA4 272 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 IKZF5Q9H5V7 419 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 MTFP1Q9UDX5 166 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 VDAC3Q9Y277 283 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 DEFA4P12838 97 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 TNFRSF1BP20333 461 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 RIGQ13278 110 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 CD226Q15762 336 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 Q56UQ5 140 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 TMEM268Q5VZI3 342 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 ZFAND6Q6FIF0 208 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 Q7L0L9 218 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 ARL14EPQ8N8R7 260 aaPredicted RBP6.39□□□□□ -1.39
CSMD2-206ENST00000373388 SLC25A33Q9BSK2 321 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 MENTQ9BUN1 341 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 IGSF23A1L1A6 192 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 C19orf67A6NJJ6 358 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 CA3P07451 260 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 CCR2P41597 374 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 PLPP7Q8NBV4 271 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 MGST2Q99735 147 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 VAX2Q9UIW0 290 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 CD3DP04234 171 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 FCGR2AP12318 317 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 C18orf21Q32NC0 220 aaPredicted RBP6.39□□□□□ -1.39
CSMD2-206ENST00000373388 FAHD1Q6P587 224 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 SERINC2Q96SA4 455 aa6.39□□□□□ -1.39
CSMD2-206ENST00000373388 WRAP73Q9P2S5 460 aaPredicted RBP6.39□□□□□ -1.39
CSMD2-206ENST00000373388 UBR1Q8IWV7 1749 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms