RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 A0A1W2PPE2 198 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 CTDSPLO15194 276 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 BCL2L11O43521 198 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 PNPP00491 289 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 ZNF43P17038 809 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 KIR2DL1P43626 348 aaPredicted RBP10.82□□□□□ -0.68
NCDN-202ENST00000373243 OR1D5P58170 312 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 NKX6-1P78426 367 aaPredicted RBP10.82□□□□□ -0.68
NCDN-202ENST00000373243 DCDP81605 110 aaKnown RBP10.82□□□□□ -0.68
NCDN-202ENST00000373243 PRDM13Q9H4Q3 707 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 MRPS28Q9Y2Q9 187 aaKnown RBP10.82□□□□□ -0.68
NCDN-202ENST00000373243 RBM7Q9Y580 266 aaKnown RBP10.82□□□□□ -0.68
NCDN-202ENST00000373243 COL4A6Q14031 1691 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 IGHV5-51A0A0C4DH38 117 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 A8MVM7 634 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 TNFRSF10CO14798 259 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 HOXC4P09017 264 aaPredicted RBP10.82□□□□□ -0.68
NCDN-202ENST00000373243 PPICP45877 212 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 DHPSP49366 369 aaPredicted RBP10.82□□□□□ -0.68
NCDN-202ENST00000373243 PRSS12P56730 875 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 HNRNPKP61978 463 aaKnown RBP eCLIP10.82□□□□□ -0.68
NCDN-202ENST00000373243 FZD5Q13467 585 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 AWAT1Q58HT5 328 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 LRP11Q86VZ4 500 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 RNF141Q8WVD5 230 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 C2orf88Q9BSF0 95 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 NUDT9Q9BW91 350 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 TMEM59Q9BXS4 323 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 HIF3AQ9Y2N7 669 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 HSPA12AO43301 675 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 LMX1BO60663 402 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 NSA2O95478 260 aaKnown RBP10.82□□□□□ -0.68
NCDN-202ENST00000373243 ACKR3P25106 362 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 CDAP32320 146 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 CD96P40200 585 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 MECP2P51608 486 aaKnown RBP10.82□□□□□ -0.68
NCDN-202ENST00000373243 POLR2HP52434 150 aaKnown RBP10.82□□□□□ -0.68
NCDN-202ENST00000373243 IL10RAQ13651 578 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 ACOT7LQ6ZUV0 252 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 UEVLDQ8IX04 471 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 OR10J5Q8NHC4 309 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 PTGES2Q9H7Z7 377 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 CARHSP1Q9Y2V2 147 aaKnown RBP10.82□□□□□ -0.68
NCDN-202ENST00000373243 VCANP13611 3396 aa10.82□□□□□ -0.68
NCDN-202ENST00000373243 DNAH14Q0VDD8 3507 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 A0A087WZY1 265 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 RNASEK-C17orf49H0YIS7 233 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 J3QRE1 110 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 HLA-DOBP13765 273 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 BLVRBP30043 206 aaPredicted RBP10.81□□□□□ -0.68
NCDN-202ENST00000373243 EGR3Q06889 387 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 ZNF141Q15928 474 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 C4orf17Q53FE4 359 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 ATPAF1Q5TC12 328 aaPredicted RBP10.81□□□□□ -0.68
NCDN-202ENST00000373243 FHL5Q5TD97 284 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 OR52N5Q8NH56 324 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 TP53TG5Q9Y2B4 290 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 CEP250Q9BV73 2442 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 C7orf77A4D0Y5 90 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 EREGO14944 169 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 UPK3AO75631 287 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 ADAP1O75689 374 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 DRD1P21728 446 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 KIR3DL2P43630 455 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 EIF5AP63241 154 aaKnown RBP10.81□□□□□ -0.68
NCDN-202ENST00000373243 MOGAT2Q3SYC2 334 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 STPG1Q5TH74 334 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 NSUN5P2Q63ZY6 315 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 LANCL3Q6ZV70 420 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 OR52N4Q8NGI2 321 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 SECTM1Q8WVN6 248 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 PIGTQ969N2 578 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 TM4SF19Q96DZ7 209 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 SEH1LQ96EE3 360 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 ZDBF2Q9HCK1 2354 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 FAM230AA0A1W2PPH8 454 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 A0A1W2PQF6 199 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 MED19A0JLT2 244 aaPredicted RBP10.81□□□□□ -0.68
NCDN-202ENST00000373243 SMCO3A2RU48 225 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 AGAP20933 346 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 TMEM176BQ3YBM2 270 aaPredicted RBP10.81□□□□□ -0.68
NCDN-202ENST00000373243 PHF19Q5T6S3 580 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 LINC01590Q5TEZ4 76 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 C11orf87Q6NUJ2 197 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 PRSS35Q8N3Z0 413 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 C1orf198Q9H425 327 aa10.81□□□□□ -0.68
NCDN-202ENST00000373243 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.8□□□□□ -0.68
NCDN-202ENST00000373243 GABRG2P18507 467 aa10.8□□□□□ -0.68
NCDN-202ENST00000373243 PSMB6P28072 239 aa10.8□□□□□ -0.68
NCDN-202ENST00000373243 GSK3AP49840 483 aa10.8□□□□□ -0.68
NCDN-202ENST00000373243 LSM6P62312 80 aaKnown RBP10.8□□□□□ -0.68
NCDN-202ENST00000373243 PJVKQ0ZLH3 352 aa10.8□□□□□ -0.68
NCDN-202ENST00000373243 MGAT2Q10469 447 aa10.8□□□□□ -0.68
NCDN-202ENST00000373243 FOXO1Q12778 655 aa10.8□□□□□ -0.68
NCDN-202ENST00000373243 MEX3BQ6ZN04 569 aaKnown RBP10.8□□□□□ -0.68
NCDN-202ENST00000373243 ATG4DQ86TL0 474 aaPredicted RBP10.8□□□□□ -0.68
NCDN-202ENST00000373243 THNSL2Q86YJ6 484 aa10.8□□□□□ -0.68
NCDN-202ENST00000373243 SCGB3A2Q96PL1 93 aa10.8□□□□□ -0.68
NCDN-202ENST00000373243 FAM117AQ9C073 453 aa10.8□□□□□ -0.68
NCDN-202ENST00000373243 SLC2A4RGQ9NR83 387 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms