RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 FTCDNL1E5RQL4 147 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 CXCR1P25024 350 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 VASPP50552 380 aaPredicted RBP8.49□□□□□ -1.05
SF3A3-201ENST00000373019 ELLP55199 621 aaPredicted RBP8.49□□□□□ -1.05
SF3A3-201ENST00000373019 RCBTB1Q8NDN9 531 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 RASD2Q96D21 266 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 ALG12Q9BV10 488 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 METTL8Q9H825 291 aaKnown RBP8.49□□□□□ -1.05
SF3A3-201ENST00000373019 PRDM6Q9NQX0 595 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 RXFP3Q9NSD7 469 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 CGGBP1Q9UFW8 167 aaPredicted RBP8.49□□□□□ -1.05
SF3A3-201ENST00000373019 CES1P1Q9UKY3 287 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 CLEC4EQ9ULY5 219 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 GTF2A1LQ9UNN4 478 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 ZFP30Q9Y2G7 519 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 RCL1Q9Y2P8 373 aaKnown RBP8.49□□□□□ -1.05
SF3A3-201ENST00000373019 TMEM265A0A087WTH1 108 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 TMEM238LA0A1B0GVL6 79 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 BNIP3LO60238 219 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 HNF1AP20823 631 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 TFPI2P48307 235 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 TAS2R31P59538 309 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 SP5Q6BEB4 398 aaPredicted RBP8.49□□□□□ -1.05
SF3A3-201ENST00000373019 SLC25A26Q70HW3 274 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 COX18Q8N8Q8 333 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 GRHL3Q8TE85 626 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 PLD4Q96BZ4 506 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 ZNF689Q96CS4 500 aaPredicted RBP8.49□□□□□ -1.05
SF3A3-201ENST00000373019 TVP23CQ96ET8 276 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 RTBDNQ9BSG5 229 aaPredicted RBP8.49□□□□□ -1.05
SF3A3-201ENST00000373019 GPR173Q9NS66 373 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 FBXO34Q9NWN3 711 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 VAX2Q9UIW0 290 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 ADAM29Q9UKF5 820 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 F5P12259 2224 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 GOLGA4Q13439 2230 aaKnown RBP8.49□□□□□ -1.05
SF3A3-201ENST00000373019 LNP1A1A4G5 178 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 TMEM212A6NML5 194 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 ETV2O00321 342 aaPredicted RBP8.49□□□□□ -1.05
SF3A3-201ENST00000373019 CCL25O15444 150 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 DEDDO75618 318 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 SLC35G6P0C7Q6 338 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 LAMP2P13473 410 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 FOLR1P15328 257 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 RPS27P42677 84 aaKnown RBP8.49□□□□□ -1.05
SF3A3-201ENST00000373019 PDLIM4P50479 330 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 CEBPGP53567 150 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 PTTG1IPP53801 180 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 P2RY6Q15077 328 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 CLLU1OSQ5K130 101 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 SPSB3Q6PJ21 355 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 C9orf40Q8IXQ3 194 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 C1orf87Q8N0U7 546 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 CYB561D1Q8N8Q1 229 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 EXD3Q8N9H8 876 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 ADAMTS15Q8TE58 950 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 PPP1R14AQ96A00 147 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 C5orf42Q9H799 3197 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 TRBV24-1A0A075B6N3 115 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 CEACAM18A8MTB9 384 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 GIMD1P0DJR0 217 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 POLR2HP52434 150 aaKnown RBP8.48□□□□□ -1.05
SF3A3-201ENST00000373019 H3F3AP84243 136 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 IQCJQ1A5X6 159 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 GXYLT1Q4G148 440 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 ZNF705AQ6ZN79 300 aaPredicted RBP8.48□□□□□ -1.05
SF3A3-201ENST00000373019 FAM220AQ7Z4H9 259 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 SMARCD2Q92925 531 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 TSLPQ969D9 159 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 DNAJA3Q96EY1 480 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 ADAD1Q96M93 576 aaKnown RBP8.48□□□□□ -1.05
SF3A3-201ENST00000373019 HIST1H2AAQ96QV6 131 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 SDF2Q99470 211 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 ELOVL1Q9BW60 279 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 TM7SF3Q9NS93 570 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 CHD7Q9P2D1 2997 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 ENTPD2Q9Y5L3 495 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 TNRC18O15417 2968 aaPredicted RBP8.48□□□□□ -1.05
SF3A3-201ENST00000373019 EP300Q09472 2414 aaPredicted RBP8.48□□□□□ -1.05
SF3A3-201ENST00000373019 NPIPA5A0A0B4J1W7 369 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 ZNF840PA6NDX5 716 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 NPIPA7E9PJI5 369 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 K7N7A8 449 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 PRH1P02810 166 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 GSTP1P09211 210 aaKnown RBP8.48□□□□□ -1.05
SF3A3-201ENST00000373019 NPIPA8P0DM63 369 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 TRA2BP62995 288 aaKnown RBP8.48□□□□□ -1.05
SF3A3-201ENST00000373019 WDR38Q5JTN6 314 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 FAM185AQ8N0U4 392 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 CSNK1A1LQ8N752 337 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 TAAR8Q969N4 342 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 RSPRY1Q96DX4 576 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 DCBLD2Q96PD2 775 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 MACROD1Q9BQ69 325 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 COMMD4Q9H0A8 199 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 TAC3Q9UHF0 121 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 RFNGQ9Y644 331 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 A0A0A6YYH2 397 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 A0A0B4J2E0 115 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 A0A1B0GX12 115 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms