RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 OR6C68A6NDL8 312 aa13.16□□□□□ -0.3
NDC1-201ENST00000371429 HRKO00198 91 aa13.16□□□□□ -0.3
NDC1-201ENST00000371429 C1QAP02745 245 aa13.16□□□□□ -0.3
NDC1-201ENST00000371429 GP1BAP07359 652 aa13.16□□□□□ -0.3
NDC1-201ENST00000371429 RFX2P48378 723 aa13.16□□□□□ -0.3
NDC1-201ENST00000371429 C12orf73Q69YU5 71 aa13.16□□□□□ -0.3
NDC1-201ENST00000371429 OR10R2Q8NGX6 335 aa13.16□□□□□ -0.3
NDC1-201ENST00000371429 GALMQ96C23 342 aa13.16□□□□□ -0.3
NDC1-201ENST00000371429 C10orf90Q96M02 699 aa13.16□□□□□ -0.3
NDC1-201ENST00000371429 SIRT5Q9NXA8 310 aa13.16□□□□□ -0.3
NDC1-201ENST00000371429 RNF150Q9ULK6 438 aa13.16□□□□□ -0.3
NDC1-201ENST00000371429 FOXS1O43638 330 aa13.16□□□□□ -0.3
NDC1-201ENST00000371429 PATE4P0C8F1 98 aa13.16□□□□□ -0.3
NDC1-201ENST00000371429 SLC25A45Q8N413 288 aa13.16□□□□□ -0.3
NDC1-201ENST00000371429 RPS10P5Q9NQ39 176 aa13.16□□□□□ -0.3
NDC1-201ENST00000371429 ZNF638Q14966 1978 aaKnown RBP13.16□□□□□ -0.3
NDC1-201ENST00000371429 CACNA1EQ15878 2313 aa13.16□□□□□ -0.3
NDC1-201ENST00000371429 TAF1LQ8IZX4 1826 aa13.16□□□□□ -0.3
NDC1-201ENST00000371429 A0A0B4J203 849 aa13.16□□□□□ -0.3
NDC1-201ENST00000371429 MDFIC2A0A1B0GVS7 189 aa13.16□□□□□ -0.3
NDC1-201ENST00000371429 DFFBO76075 338 aa13.16□□□□□ -0.3
NDC1-201ENST00000371429 HBE1P02100 147 aa13.16□□□□□ -0.3
NDC1-201ENST00000371429 FCN2Q15485 313 aa13.16□□□□□ -0.3
NDC1-201ENST00000371429 Q6ZRG5 221 aa13.16□□□□□ -0.3
NDC1-201ENST00000371429 ZNF416Q9BWM5 594 aa13.16□□□□□ -0.3
NDC1-201ENST00000371429 TRAPPC4Q9Y296 219 aa13.16□□□□□ -0.3
NDC1-201ENST00000371429 NCCRP1Q6ZVX7 275 aaPredicted RBP13.16□□□□□ -0.3
NDC1-201ENST00000371429 NUFIP2Q7Z417 695 aaKnown RBP13.16□□□□□ -0.3
NDC1-201ENST00000371429 TRMT61AQ96FX7 289 aaKnown RBP13.16□□□□□ -0.3
NDC1-201ENST00000371429 DOK1Q99704 481 aa13.16□□□□□ -0.3
NDC1-201ENST00000371429 LIN7CQ9NUP9 197 aaKnown RBP13.16□□□□□ -0.3
NDC1-201ENST00000371429 PRELID1Q9Y255 219 aa13.16□□□□□ -0.3
NDC1-201ENST00000371429 CEP250Q9BV73 2442 aa13.15□□□□□ -0.3
NDC1-201ENST00000371429 F6UZH7 168 aa13.15□□□□□ -0.3
NDC1-201ENST00000371429 GREM1O60565 184 aa13.15□□□□□ -0.3
NDC1-201ENST00000371429 WNT1P04628 370 aa13.15□□□□□ -0.3
NDC1-201ENST00000371429 TNFAIP6P98066 277 aaPredicted RBP13.15□□□□□ -0.3
NDC1-201ENST00000371429 TIAL1Q01085 375 aaKnown RBP eCLIP13.15□□□□□ -0.3
NDC1-201ENST00000371429 ZNF85Q03923 595 aa13.15□□□□□ -0.3
NDC1-201ENST00000371429 LYPD8Q6UX82 237 aa13.15□□□□□ -0.3
NDC1-201ENST00000371429 TSEN54Q7Z6J9 526 aaKnown RBP13.15□□□□□ -0.3
NDC1-201ENST00000371429 ARPC5LQ9BPX5 153 aa13.15□□□□□ -0.3
NDC1-201ENST00000371429 RAB1BQ9H0U4 201 aa13.15□□□□□ -0.3
NDC1-201ENST00000371429 COPS3Q9UNS2 423 aa13.15□□□□□ -0.3
NDC1-201ENST00000371429 FUT3P21217 361 aa13.15□□□□□ -0.3
NDC1-201ENST00000371429 PEBP1P30086 187 aaKnown RBP13.15□□□□□ -0.3
NDC1-201ENST00000371429 DEGS2Q6QHC5 323 aa13.15□□□□□ -0.3
NDC1-201ENST00000371429 ARHGEF39Q8N4T4 335 aa13.15□□□□□ -0.3
NDC1-201ENST00000371429 ARV1Q9H2C2 271 aa13.15□□□□□ -0.3
NDC1-201ENST00000371429 H3BMH7 237 aa13.15□□□□□ -0.3
NDC1-201ENST00000371429 SIX6O95475 246 aa13.15□□□□□ -0.3
NDC1-201ENST00000371429 GPANK1O95872 356 aa13.15□□□□□ -0.3
NDC1-201ENST00000371429 CCL2P13500 99 aa13.15□□□□□ -0.3
NDC1-201ENST00000371429 C21orf58P58505 322 aa13.15□□□□□ -0.3
NDC1-201ENST00000371429 TUSC5Q8IXB3 177 aa13.15□□□□□ -0.3
NDC1-201ENST00000371429 OR6X1Q8NH79 312 aa13.15□□□□□ -0.3
NDC1-201ENST00000371429 TMEM30CPA0ZSE6 113 aa13.15□□□□□ -0.31
NDC1-201ENST00000371429 CRYM-AS1A6NIL9 109 aa13.15□□□□□ -0.31
NDC1-201ENST00000371429 HYAL3O43820 417 aaPredicted RBP13.15□□□□□ -0.31
NDC1-201ENST00000371429 PPP3CBP16298 524 aa13.15□□□□□ -0.31
NDC1-201ENST00000371429 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.15□□□□□ -0.31
NDC1-201ENST00000371429 FAM27D1Q5T7N8 215 aa13.15□□□□□ -0.31
NDC1-201ENST00000371429 ADPRHL1Q8NDY3 354 aa13.15□□□□□ -0.31
NDC1-201ENST00000371429 ONECUT1Q9UBC0 465 aa13.15□□□□□ -0.31
NDC1-201ENST00000371429 CTLA4P16410 223 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 CDKN2AP42771 156 aaKnown RBP13.14□□□□□ -0.31
NDC1-201ENST00000371429 PPP1CBP62140 327 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 CDK5Q00535 292 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 DBPQ10586 325 aaPredicted RBP13.14□□□□□ -0.31
NDC1-201ENST00000371429 POU4F3Q15319 338 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 SMIM15Q7Z3B0 74 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 EXTL1Q92935 676 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 TM4SF19Q96DZ7 209 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 SF3B5Q9BWJ5 86 aaKnown RBP13.14□□□□□ -0.31
NDC1-201ENST00000371429 DOCK5Q9H7D0 1870 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 FABP7O15540 132 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 IL34Q6ZMJ4 242 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 UBAC2Q8NBM4 344 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 OR2M7Q8NG81 312 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 SAP25Q8TEE9 199 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 RHNO1Q9BSD3 238 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 SLC17A2O00624 439 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 CCSO14618 274 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 DHRS3O75911 302 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 SP1P08047 785 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 PCBP3P57721 371 aaKnown RBP13.14□□□□□ -0.31
NDC1-201ENST00000371429 ERHP84090 104 aaKnown RBP13.14□□□□□ -0.31
NDC1-201ENST00000371429 ALKAL2Q6UX46 152 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 BHLHA15Q7RTS1 189 aaPredicted RBP13.14□□□□□ -0.31
NDC1-201ENST00000371429 MOB3BQ86TA1 216 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 DNASE2BQ8WZ79 361 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 ZNF251Q9BRH9 671 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 RNF32Q9H0A6 362 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 FOXJ3Q9UPW0 622 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 AQP7P3A6NL99 342 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 SULT1C2O00338 296 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 PI3P19957 117 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 NME2P22392 152 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 ARL16Q0P5N6 197 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 WDR38Q5JTN6 314 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms