RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 ZNF154Q13106 437 aa15.81■□□□□ 0.12
CKS1B-203ENST00000368439 SLC35F2Q8IXU6 374 aa15.81■□□□□ 0.12
CKS1B-203ENST00000368439 TEX29Q8N6K0 151 aa15.81■□□□□ 0.12
CKS1B-203ENST00000368439 OR1M1Q8NGA1 313 aa15.81■□□□□ 0.12
CKS1B-203ENST00000368439 TTTY10Q9BZA0 68 aa15.81■□□□□ 0.12
CKS1B-203ENST00000368439 FGF23Q9GZV9 251 aaPredicted RBP15.81■□□□□ 0.12
CKS1B-203ENST00000368439 RIBC2Q9H4K1 309 aa15.81■□□□□ 0.12
CKS1B-203ENST00000368439 H2AFY2Q9P0M6 372 aaPredicted RBP15.81■□□□□ 0.12
CKS1B-203ENST00000368439 ZNF391Q9UJN7 358 aa15.81■□□□□ 0.12
CKS1B-203ENST00000368439 A0A0U1RQV5 110 aa15.8■□□□□ 0.12
CKS1B-203ENST00000368439 TMEM269A0A1B0GVZ9 245 aa15.8■□□□□ 0.12
CKS1B-203ENST00000368439 MAGEB4O15481 346 aaPredicted RBP15.8■□□□□ 0.12
CKS1B-203ENST00000368439 EGR1P18146 543 aa15.8■□□□□ 0.12
CKS1B-203ENST00000368439 EPHA1P21709 976 aa15.8■□□□□ 0.12
CKS1B-203ENST00000368439 CD80P33681 288 aa15.8■□□□□ 0.12
CKS1B-203ENST00000368439 CXCR4P61073 352 aa15.8■□□□□ 0.12
CKS1B-203ENST00000368439 PAX8Q06710 450 aa15.8■□□□□ 0.12
CKS1B-203ENST00000368439 SFRP4Q6FHJ7 346 aaPredicted RBP15.8■□□□□ 0.12
CKS1B-203ENST00000368439 ZFP1Q6P2D0 407 aa15.8■□□□□ 0.12
CKS1B-203ENST00000368439 GID4Q8IVV7 300 aa15.8■□□□□ 0.12
CKS1B-203ENST00000368439 OR8B3Q8NGG8 313 aa15.8■□□□□ 0.12
CKS1B-203ENST00000368439 OR8S1Q8NH09 359 aa15.8■□□□□ 0.12
CKS1B-203ENST00000368439 NANPQ8TBE9 248 aa15.8■□□□□ 0.12
CKS1B-203ENST00000368439 PPP1R14AQ96A00 147 aa15.8■□□□□ 0.12
CKS1B-203ENST00000368439 OR8B2Q96RD0 313 aa15.8■□□□□ 0.12
CKS1B-203ENST00000368439 MNTQ99583 582 aa15.8■□□□□ 0.12
CKS1B-203ENST00000368439 PAPOLGQ9BWT3 736 aaKnown RBP15.8■□□□□ 0.12
CKS1B-203ENST00000368439 TLNRD1Q9H1K6 362 aa15.8■□□□□ 0.12
CKS1B-203ENST00000368439 CLN6Q9NWW5 311 aa15.8■□□□□ 0.12
CKS1B-203ENST00000368439 USE1Q9NZ43 259 aa15.8■□□□□ 0.12
CKS1B-203ENST00000368439 CTSZQ9UBR2 303 aa15.8■□□□□ 0.12
CKS1B-203ENST00000368439 MPC1Q9Y5U8 109 aa15.8■□□□□ 0.12
CKS1B-203ENST00000368439 EBAG9O00559 213 aa15.79■□□□□ 0.12
CKS1B-203ENST00000368439 VENTXO95231 258 aa15.79■□□□□ 0.12
CKS1B-203ENST00000368439 GNB2P62879 340 aa15.79■□□□□ 0.12
CKS1B-203ENST00000368439 CSNK2BP67870 215 aa15.79■□□□□ 0.12
CKS1B-203ENST00000368439 MFGE8Q08431 387 aaPredicted RBP15.79■□□□□ 0.12
CKS1B-203ENST00000368439 PRDX4Q13162 271 aa15.79■□□□□ 0.12
CKS1B-203ENST00000368439 TUSC1Q2TAM9 212 aa15.79■□□□□ 0.12
CKS1B-203ENST00000368439 ZNF322Q6U7Q0 402 aaPredicted RBP15.79■□□□□ 0.12
CKS1B-203ENST00000368439 GALNT4Q8N4A0 578 aa15.79■□□□□ 0.12
CKS1B-203ENST00000368439 BOLLQ8N9W6 283 aaKnown RBP15.79■□□□□ 0.12
CKS1B-203ENST00000368439 SEMA6DQ8NFY4 1073 aa15.79■□□□□ 0.12
CKS1B-203ENST00000368439 OR8J1Q8NGP2 316 aa15.79■□□□□ 0.12
CKS1B-203ENST00000368439 APOL4Q9BPW4 351 aa15.79■□□□□ 0.12
CKS1B-203ENST00000368439 PBOV1Q9GZY1 135 aa15.79■□□□□ 0.12
CKS1B-203ENST00000368439 RNPEPL1Q9HAU8 725 aa15.79■□□□□ 0.12
CKS1B-203ENST00000368439 OR5V1Q9UGF6 321 aa15.79■□□□□ 0.12
CKS1B-203ENST00000368439 WARS2Q9UGM6 360 aaKnown RBP15.79■□□□□ 0.12
CKS1B-203ENST00000368439 NUFIP1Q9UHK0 495 aaKnown RBP15.79■□□□□ 0.12
CKS1B-203ENST00000368439 MRM2Q9UI43 246 aaKnown RBP15.79■□□□□ 0.12
CKS1B-203ENST00000368439 OOEPA6NGQ2 149 aa15.78■□□□□ 0.12
CKS1B-203ENST00000368439 A6NLC8 198 aa15.78■□□□□ 0.12
CKS1B-203ENST00000368439 ZNF850A8MQ14 1090 aa15.78■□□□□ 0.12
CKS1B-203ENST00000368439 C3orf80F5H4A9 247 aa15.78■□□□□ 0.12
CKS1B-203ENST00000368439 EI24O14681 340 aa15.78■□□□□ 0.12
CKS1B-203ENST00000368439 PHYHO14832 338 aa15.78■□□□□ 0.12
CKS1B-203ENST00000368439 FCN3O75636 299 aa15.78■□□□□ 0.12
CKS1B-203ENST00000368439 HTR1FP30939 366 aa15.78■□□□□ 0.12
CKS1B-203ENST00000368439 GNALP38405 381 aa15.78■□□□□ 0.12
CKS1B-203ENST00000368439 PITPNBP48739 271 aa15.78■□□□□ 0.12
CKS1B-203ENST00000368439 RIDAP52758 137 aaKnown RBP15.78■□□□□ 0.12
CKS1B-203ENST00000368439 SNCBQ16143 134 aa15.78■□□□□ 0.12
CKS1B-203ENST00000368439 FAM76BQ5HYJ3 339 aa15.78■□□□□ 0.12
CKS1B-203ENST00000368439 KLF17Q5JT82 389 aaPredicted RBP15.78■□□□□ 0.12
CKS1B-203ENST00000368439 LIPNQ5VXI9 398 aa15.78■□□□□ 0.12
CKS1B-203ENST00000368439 TEX36Q5VZQ5 186 aa15.78■□□□□ 0.12
CKS1B-203ENST00000368439 WDR25Q64LD2 544 aaPredicted RBP15.78■□□□□ 0.12
CKS1B-203ENST00000368439 WDR82Q6UXN9 313 aa15.78■□□□□ 0.12
CKS1B-203ENST00000368439 SSX6Q7RTT6 188 aa15.78■□□□□ 0.12
CKS1B-203ENST00000368439 FAM90A1Q86YD7 464 aa15.78■□□□□ 0.12
CKS1B-203ENST00000368439 FTMTQ8N4E7 242 aa15.78■□□□□ 0.12
CKS1B-203ENST00000368439 OR51G2Q8NGK0 314 aa15.78■□□□□ 0.12
CKS1B-203ENST00000368439 HPSE2Q8WWQ2 592 aa15.78■□□□□ 0.12
CKS1B-203ENST00000368439 OR5P3Q8WZ94 311 aa15.78■□□□□ 0.12
CKS1B-203ENST00000368439 EME1Q96AY2 570 aa15.78■□□□□ 0.12
CKS1B-203ENST00000368439 C19orf24Q9BVV8 132 aa15.78■□□□□ 0.12
CKS1B-203ENST00000368439 OCEL1Q9H607 264 aa15.78■□□□□ 0.12
CKS1B-203ENST00000368439 IKZF2Q9UKS7 526 aa15.78■□□□□ 0.12
CKS1B-203ENST00000368439 AUP1Q9Y679 476 aa15.78■□□□□ 0.12
CKS1B-203ENST00000368439 A0A0A6YYJ9 748 aa15.77■□□□□ 0.12
CKS1B-203ENST00000368439 IGHV2-70DA0A0C4DH43 119 aa15.77■□□□□ 0.12
CKS1B-203ENST00000368439 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.77■□□□□ 0.12
CKS1B-203ENST00000368439 TTRP02766 147 aa15.77■□□□□ 0.12
CKS1B-203ENST00000368439 CFHR2P36980 270 aa15.77■□□□□ 0.12
CKS1B-203ENST00000368439 IL5RAQ01344 420 aa15.77■□□□□ 0.12
CKS1B-203ENST00000368439 EGR3Q06889 387 aa15.77■□□□□ 0.12
CKS1B-203ENST00000368439 SCGB2A2Q13296 93 aa15.77■□□□□ 0.12
CKS1B-203ENST00000368439 ZNF829Q3KNS6 432 aaPredicted RBP15.77■□□□□ 0.12
CKS1B-203ENST00000368439 ZNF684Q5T5D7 378 aa15.77■□□□□ 0.12
CKS1B-203ENST00000368439 NLRC3Q7RTR2 1065 aa15.77■□□□□ 0.12
CKS1B-203ENST00000368439 OR51E1Q8TCB6 317 aa15.77■□□□□ 0.12
CKS1B-203ENST00000368439 RAB40AQ8WXH6 277 aa15.77■□□□□ 0.12
CKS1B-203ENST00000368439 PIGCQ92535 297 aa15.77■□□□□ 0.12
CKS1B-203ENST00000368439 UBE2FQ969M7 185 aa15.77■□□□□ 0.12
CKS1B-203ENST00000368439 HRASLS5Q96KN8 279 aa15.77■□□□□ 0.12
CKS1B-203ENST00000368439 MICU1Q9BPX6 476 aa15.77■□□□□ 0.12
CKS1B-203ENST00000368439 GPR84Q9NQS5 396 aa15.77■□□□□ 0.12
CKS1B-203ENST00000368439 CLN8Q9UBY8 286 aa15.77■□□□□ 0.12
CKS1B-203ENST00000368439 ANK2Q01484 3957 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms