RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 RGCCQ9H4X1 137 aa11.34□□□□□ -0.59
TNFRSF1A-202ENST00000366159 YY1AP1Q9H869 796 aa11.34□□□□□ -0.59
TNFRSF1A-202ENST00000366159 ZNF556Q9HAH1 456 aa11.34□□□□□ -0.59
TNFRSF1A-202ENST00000366159 DNAJC27Q9NZQ0 273 aa11.34□□□□□ -0.59
TNFRSF1A-202ENST00000366159 ERVK-18Q9QC07 812 aa11.34□□□□□ -0.59
TNFRSF1A-202ENST00000366159 RHBDD3Q9Y3P4 386 aa11.34□□□□□ -0.59
TNFRSF1A-202ENST00000366159 IGHV3OR16-10A0A075B7F0 116 aa11.33□□□□□ -0.6
TNFRSF1A-202ENST00000366159 TRAV40A0A0B4J280 105 aa11.33□□□□□ -0.6
TNFRSF1A-202ENST00000366159 ZNF879B4DU55 563 aa11.33□□□□□ -0.6
TNFRSF1A-202ENST00000366159 GSC2O15499 205 aa11.33□□□□□ -0.6
TNFRSF1A-202ENST00000366159 ADAM20O43506 726 aa11.33□□□□□ -0.6
TNFRSF1A-202ENST00000366159 E2F6O75461 281 aa11.33□□□□□ -0.6
TNFRSF1A-202ENST00000366159 TIPRLO75663 272 aa11.33□□□□□ -0.6
TNFRSF1A-202ENST00000366159 GYPAP02724 150 aa11.33□□□□□ -0.6
TNFRSF1A-202ENST00000366159 LIPFP07098 398 aa11.33□□□□□ -0.6
TNFRSF1A-202ENST00000366159 DAPP51397 102 aa11.33□□□□□ -0.6
TNFRSF1A-202ENST00000366159 BPIFB3P59826 476 aa11.33□□□□□ -0.6
TNFRSF1A-202ENST00000366159 EFNB1P98172 346 aa11.33□□□□□ -0.6
TNFRSF1A-202ENST00000366159 BAMBIQ13145 260 aa11.33□□□□□ -0.6
TNFRSF1A-202ENST00000366159 CD276Q5ZPR3 534 aa11.33□□□□□ -0.6
TNFRSF1A-202ENST00000366159 GALNT4Q8N4A0 578 aa11.33□□□□□ -0.6
TNFRSF1A-202ENST00000366159 BOLLQ8N9W6 283 aaKnown RBP11.33□□□□□ -0.6
TNFRSF1A-202ENST00000366159 CSNK2A3Q8NEV1 391 aa11.33□□□□□ -0.6
TNFRSF1A-202ENST00000366159 THEM6Q8WUY1 208 aa11.33□□□□□ -0.6
TNFRSF1A-202ENST00000366159 DUX5Q96PT3 197 aa11.33□□□□□ -0.6
TNFRSF1A-202ENST00000366159 TEAD3Q99594 435 aa11.33□□□□□ -0.6
TNFRSF1A-202ENST00000366159 CADM1Q9BY67 442 aaKnown RBP11.33□□□□□ -0.6
TNFRSF1A-202ENST00000366159 FGF23Q9GZV9 251 aaPredicted RBP11.33□□□□□ -0.6
TNFRSF1A-202ENST00000366159 RASSF4Q9H2L5 321 aa11.33□□□□□ -0.6
TNFRSF1A-202ENST00000366159 MMADHCQ9H3L0 296 aaPredicted RBP11.33□□□□□ -0.6
TNFRSF1A-202ENST00000366159 CCDC182A6NF36 153 aa11.32□□□□□ -0.6
TNFRSF1A-202ENST00000366159 CST4P01036 141 aa11.32□□□□□ -0.6
TNFRSF1A-202ENST00000366159 MUC1P15941 1255 aaPredicted RBP11.32□□□□□ -0.6
TNFRSF1A-202ENST00000366159 AMY2BP19961 511 aa11.32□□□□□ -0.6
TNFRSF1A-202ENST00000366159 MTNR1AP48039 350 aa11.32□□□□□ -0.6
TNFRSF1A-202ENST00000366159 HCCSP53701 268 aa11.32□□□□□ -0.6
TNFRSF1A-202ENST00000366159 CRISP1P54107 249 aa11.32□□□□□ -0.6
TNFRSF1A-202ENST00000366159 PSMA6P60900 246 aaKnown RBP11.32□□□□□ -0.6
TNFRSF1A-202ENST00000366159 CSNK2BP67870 215 aa11.32□□□□□ -0.6
TNFRSF1A-202ENST00000366159 ELF3P78545 371 aaPredicted RBP11.32□□□□□ -0.6
TNFRSF1A-202ENST00000366159 POU4F2Q12837 409 aa11.32□□□□□ -0.6
TNFRSF1A-202ENST00000366159 BNIP1Q12981 228 aa11.32□□□□□ -0.6
TNFRSF1A-202ENST00000366159 DEGS2Q6QHC5 323 aa11.32□□□□□ -0.6
TNFRSF1A-202ENST00000366159 C3orf56Q8N813 242 aa11.32□□□□□ -0.6
TNFRSF1A-202ENST00000366159 OR8B12Q8NGG6 310 aa11.32□□□□□ -0.6
TNFRSF1A-202ENST00000366159 OR8S1Q8NH09 359 aa11.32□□□□□ -0.6
TNFRSF1A-202ENST00000366159 DNAJC9Q8WXX5 260 aa11.32□□□□□ -0.6
TNFRSF1A-202ENST00000366159 ZDHHC16Q969W1 377 aa11.32□□□□□ -0.6
TNFRSF1A-202ENST00000366159 PGAM5Q96HS1 289 aa11.32□□□□□ -0.6
TNFRSF1A-202ENST00000366159 TECTBQ96PL2 329 aa11.32□□□□□ -0.6
TNFRSF1A-202ENST00000366159 TBX15Q96SF7 602 aa11.32□□□□□ -0.6
TNFRSF1A-202ENST00000366159 YIPF3Q9GZM5 350 aa11.32□□□□□ -0.6
TNFRSF1A-202ENST00000366159 SIRPDQ9H106 197 aa11.32□□□□□ -0.6
TNFRSF1A-202ENST00000366159 NIPAL2Q9H841 368 aa11.32□□□□□ -0.6
TNFRSF1A-202ENST00000366159 BRD7Q9NPI1 651 aa11.32□□□□□ -0.6
TNFRSF1A-202ENST00000366159 ZNF391Q9UJN7 358 aa11.32□□□□□ -0.6
TNFRSF1A-202ENST00000366159 LRP12Q9Y561 859 aa11.32□□□□□ -0.6
TNFRSF1A-202ENST00000366159 MPC1Q9Y5U8 109 aa11.32□□□□□ -0.6
TNFRSF1A-202ENST00000366159 MEGF8Q7Z7M0 2845 aa11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 MDFIC2A0A1B0GVS7 189 aa11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 A6NLC8 198 aa11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 PRR32B1ATL7 298 aa11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 SRRM5B3KS81 715 aa11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 P2RY10O00398 339 aa11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 DVL1O14640 695 aa11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 CDIPTO14735 213 aa11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 IGLV3-1P01715 115 aa11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 SFTPBP07988 381 aa11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 NAA10P41227 235 aaPredicted RBP11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 IL5RAQ01344 420 aa11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 FOXL1Q12952 345 aa11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 APOFQ13790 326 aa11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 PTGES3Q15185 160 aaKnown RBP11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 SNCBQ16143 134 aa11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 DEFB112Q30KQ8 113 aa11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 ATPAF1Q5TC12 328 aaPredicted RBP11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 BRD3OSQ6XYD6 125 aa11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 FGFRL1Q8N441 504 aa11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 LY6G5BQ8NDX9 201 aa11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 LRRC29Q8WV35 223 aa11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 HPSE2Q8WWQ2 592 aa11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 OR5P3Q8WZ94 311 aa11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 C12orf43Q96C57 262 aaKnown RBP11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 SEH1LQ96EE3 360 aa11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 WDFY2Q96P53 400 aa11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 ZNF747Q9BV97 191 aa11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 PAPOLBQ9NRJ5 636 aaKnown RBP11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 FAM206AQ9NX38 181 aa11.31□□□□□ -0.6
TNFRSF1A-202ENST00000366159 CMYA5Q8N3K9 4069 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 IGHV3OR15-7A0A075B7D8 119 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 CENPVL3A0A0U1RRI6 287 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 A0A1B0GW55 424 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 hCG_1807616A0A1W2PRN6 198 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 ACOD1A6NK06 481 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 TOX4O94842 621 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 ECDO95905 644 aaPredicted RBP11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 DUX4L2P0CJ85 424 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 DUX4L3P0CJ86 424 aa11.3□□□□□ -0.6
TNFRSF1A-202ENST00000366159 DUX4L4P0CJ87 422 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms