RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 SULT1E1P49888 294 aa1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 KRTAP12-1P59990 96 aa1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 ZNF141Q15928 474 aa1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 CCL15Q16663 113 aa1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 C6orf99Q4VX62 202 aa1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 ZNF678Q5SXM1 525 aa1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 ZFAND6Q6FIF0 208 aa1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 HORMAD1Q86X24 394 aa1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 SLC25A29Q8N8R3 303 aa1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 OR4C13Q8NGP0 309 aa1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 ENKURQ8TC29 256 aa1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 RPEQ96AT9 228 aa1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 S100PBPQ96BU1 408 aa1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 PRRC1Q96M27 445 aa1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 C20orf24Q9BUV8 137 aa1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 MS4A8Q9BY19 250 aa1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 VSIRQ9H7M9 311 aa1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 CLN8Q9UBY8 286 aa1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 HMGXB4Q9UGU5 601 aa1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 MCTS1Q9ULC4 181 aaKnown RBP1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 PRRC2BQ5JSZ5 2229 aaKnown RBP1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 LOC102724200A0A096LPH7 203 aaPredicted RBP1.55□□□□□ -2.16
RNU4-28P-201ENST00000364739 TRBV11-1A0A0K0K1C0 115 aa1.55□□□□□ -2.16
RNU4-28P-201ENST00000364739 C9JVG2 144 aa1.55□□□□□ -2.16
RNU4-28P-201ENST00000364739 C15orf65H3BRN8 121 aa1.55□□□□□ -2.16
RNU4-28P-201ENST00000364739 CCNB2O95067 398 aa1.55□□□□□ -2.16
RNU4-28P-201ENST00000364739 NRASP01111 189 aa1.55□□□□□ -2.16
RNU4-28P-201ENST00000364739 HRASP01112 189 aa1.55□□□□□ -2.16
RNU4-28P-201ENST00000364739 KRASP01116 189 aa1.55□□□□□ -2.16
RNU4-28P-201ENST00000364739 OXTP01178 125 aa1.55□□□□□ -2.16
RNU4-28P-201ENST00000364739 MAS1P04201 325 aa1.55□□□□□ -2.16
RNU4-28P-201ENST00000364739 CLTAP09496 248 aa1.55□□□□□ -2.16
RNU4-28P-201ENST00000364739 THRAP10827 490 aa1.55□□□□□ -2.16
RNU4-28P-201ENST00000364739 EIF2S2P20042 333 aaKnown RBP1.55□□□□□ -2.16
RNU4-28P-201ENST00000364739 APLNRP35414 380 aa1.55□□□□□ -2.16
RNU4-28P-201ENST00000364739 PPICP45877 212 aa1.55□□□□□ -2.16
RNU4-28P-201ENST00000364739 FABP6P51161 128 aa1.55□□□□□ -2.16
RNU4-28P-201ENST00000364739 ATP5IP56385 69 aaPredicted RBP1.55□□□□□ -2.16
RNU4-28P-201ENST00000364739 KLF3P57682 345 aaPredicted RBP1.55□□□□□ -2.16
RNU4-28P-201ENST00000364739 CEP55Q53EZ4 464 aa1.55□□□□□ -2.16
RNU4-28P-201ENST00000364739 LIN9Q5TKA1 542 aa1.55□□□□□ -2.16
RNU4-28P-201ENST00000364739 KDM4DQ6B0I6 523 aa1.55□□□□□ -2.16
RNU4-28P-201ENST00000364739 TMPRSS11AQ6ZMR5 421 aa1.55□□□□□ -2.16
RNU4-28P-201ENST00000364739 Q8NDZ9 215 aa1.55□□□□□ -2.16
RNU4-28P-201ENST00000364739 OR4M2Q8NGB6 313 aa1.55□□□□□ -2.16
RNU4-28P-201ENST00000364739 ACTL9Q8TC94 416 aa1.55□□□□□ -2.16
RNU4-28P-201ENST00000364739 RBPMSQ93062 196 aaKnown RBP1.55□□□□□ -2.16
RNU4-28P-201ENST00000364739 SLC38A4Q969I6 547 aa1.55□□□□□ -2.16
RNU4-28P-201ENST00000364739 CSPG4P5Q96PW8 444 aa1.55□□□□□ -2.16
RNU4-28P-201ENST00000364739 SLC7A5P2Q9GIP4 190 aa1.55□□□□□ -2.16
RNU4-28P-201ENST00000364739 CAB39Q9Y376 341 aaPredicted RBP1.55□□□□□ -2.16
RNU4-28P-201ENST00000364739 IGHG2P01859 326 aa1.54□□□□□ -2.16
RNU4-28P-201ENST00000364739 PCK1P35558 622 aa1.54□□□□□ -2.16
RNU4-28P-201ENST00000364739 UBE2MP61081 183 aaKnown RBP1.54□□□□□ -2.16
RNU4-28P-201ENST00000364739 PPP1CAP62136 330 aa1.54□□□□□ -2.16
RNU4-28P-201ENST00000364739 CPTPQ5TA50 214 aa1.54□□□□□ -2.16
RNU4-28P-201ENST00000364739 TMEM236Q5W0B7 351 aa1.54□□□□□ -2.16
RNU4-28P-201ENST00000364739 TTC29Q8NA56 475 aaPredicted RBP1.54□□□□□ -2.16
RNU4-28P-201ENST00000364739 OTUB2Q96DC9 234 aa1.54□□□□□ -2.16
RNU4-28P-201ENST00000364739 UCK2Q9BZX2 261 aa1.54□□□□□ -2.16
RNU4-28P-201ENST00000364739 ZYG11BQ9C0D3 744 aa1.54□□□□□ -2.16
RNU4-28P-201ENST00000364739 NLE1Q9NVX2 485 aaPredicted RBP1.54□□□□□ -2.16
RNU4-28P-201ENST00000364739 RAB22AQ9UL26 194 aa1.54□□□□□ -2.16
RNU4-28P-201ENST00000364739 RAB23Q9ULC3 237 aa1.54□□□□□ -2.16
RNU4-28P-201ENST00000364739 RCL1Q9Y2P8 373 aaKnown RBP1.54□□□□□ -2.16
RNU4-28P-201ENST00000364739 ANKRD65E5RJM6 399 aa1.53□□□□□ -2.16
RNU4-28P-201ENST00000364739 H7C0C1 242 aa1.53□□□□□ -2.16
RNU4-28P-201ENST00000364739 SLC16A7O60669 478 aa1.53□□□□□ -2.16
RNU4-28P-201ENST00000364739 CCDC22O60826 627 aa1.53□□□□□ -2.16
RNU4-28P-201ENST00000364739 IGHV1-46P01743 117 aa1.53□□□□□ -2.16
RNU4-28P-201ENST00000364739 RFC3P40938 356 aa1.53□□□□□ -2.16
RNU4-28P-201ENST00000364739 ATP5OP48047 213 aa1.53□□□□□ -2.16
RNU4-28P-201ENST00000364739 FMODQ06828 376 aa1.53□□□□□ -2.16
RNU4-28P-201ENST00000364739 PDZD11Q5EBL8 140 aa1.53□□□□□ -2.16
RNU4-28P-201ENST00000364739 LDLRAD2Q5SZI1 272 aa1.53□□□□□ -2.16
RNU4-28P-201ENST00000364739 MFSD14CQ5VZR4 134 aa1.53□□□□□ -2.16
RNU4-28P-201ENST00000364739 ZNF470Q6ECI4 717 aa1.53□□□□□ -2.16
RNU4-28P-201ENST00000364739 MORN3Q6PF18 240 aaPredicted RBP1.53□□□□□ -2.16
RNU4-28P-201ENST00000364739 SIGLEC1Q9BZZ2 1709 aa1.53□□□□□ -2.16
RNU4-28P-201ENST00000364739 CLN6Q9NWW5 311 aa1.53□□□□□ -2.16
RNU4-28P-201ENST00000364739 SSH2Q76I76 1423 aa1.52□□□□□ -2.17
RNU4-28P-201ENST00000364739 GOLGA8OA6NCC3 632 aa1.52□□□□□ -2.17
RNU4-28P-201ENST00000364739 GOLGA8NF8WBI6 632 aa1.52□□□□□ -2.17
RNU4-28P-201ENST00000364739 CPSF4O95639 269 aaKnown RBP1.52□□□□□ -2.17
RNU4-28P-201ENST00000364739 MPIP34949 423 aa1.52□□□□□ -2.17
RNU4-28P-201ENST00000364739 MRPL19P49406 292 aaKnown RBP1.52□□□□□ -2.17
RNU4-28P-201ENST00000364739 TRMT5Q32P41 509 aaKnown RBP1.52□□□□□ -2.17
RNU4-28P-201ENST00000364739 KRTAP25-1Q3LHN0 102 aa1.52□□□□□ -2.17
RNU4-28P-201ENST00000364739 SPESP1Q6UW49 350 aa1.52□□□□□ -2.17
RNU4-28P-201ENST00000364739 OR4D6Q8NGJ1 314 aa1.52□□□□□ -2.17
RNU4-28P-201ENST00000364739 TPD52L3Q96J77 140 aa1.52□□□□□ -2.17
RNU4-28P-201ENST00000364739 XPO6Q96QU8 1125 aaKnown RBP1.52□□□□□ -2.17
RNU4-28P-201ENST00000364739 SLC22A7Q9Y694 548 aa1.52□□□□□ -2.17
RNU4-28P-201ENST00000364739 MYO9BQ13459 2157 aa1.51□□□□□ -2.17
RNU4-28P-201ENST00000364739 MROH7Q68CQ1 1323 aa1.51□□□□□ -2.17
RNU4-28P-201ENST00000364739 TSPAN11A1L157 253 aa1.51□□□□□ -2.17
RNU4-28P-201ENST00000364739 IZUMO1RA6ND01 250 aa1.51□□□□□ -2.17
RNU4-28P-201ENST00000364739 OVOL1O14753 267 aa1.51□□□□□ -2.17
RNU4-28P-201ENST00000364739 IGHMP01871 453 aa1.51□□□□□ -2.17
RNU4-28P-201ENST00000364739 IL3RAP26951 378 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms