RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 OR1E2P47887 323 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 GZMMP51124 257 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 ARHGDIAP52565 204 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 BTG1P62324 171 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 LCN6P62502 163 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 PSG7Q13046 419 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 ZMYND11Q15326 602 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 INTS11Q5TA45 600 aaKnown RBP4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 FAM27BQ5VT28 67 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 OTPQ5XKR4 325 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 LEG1Q6P5S2 330 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 UNQ6126/PRO20091Q6UXV3 157 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 Q6ZR03 302 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 HDDC2Q7Z4H3 204 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 SLC30A8Q8IWU4 369 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 SPICQ8N5J4 248 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 OR2Z1Q8NG97 314 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 TMEM239Q8WW34 195 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 ITLN1Q8WWA0 313 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 DYDC1Q8WWB3 177 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 POP5Q969H6 163 aaKnown RBP4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 C4orf45Q96LM5 186 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 C1QTNF4Q9BXJ3 329 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 TXNIPQ9H3M7 391 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 RABEP2Q9H5N1 569 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 ZNF696Q9H7X3 374 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 KAT8Q9H7Z6 458 aaKnown RBP4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 PATZ1Q9HBE1 687 aaKnown RBP4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 CYSLTR2Q9NS75 346 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 TMEM106BQ9NUM4 274 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 PLEK2Q9NYT0 353 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 OR6C3Q9NZP0 311 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 STX18Q9P2W9 335 aaKnown RBP4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 RIMS3Q9UJD0 308 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 KLHL21Q9UJP4 597 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 MED31Q9Y3C7 131 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 INSIG2Q9Y5U4 225 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 DOCK11Q5JSL3 2073 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 IGLV5-37A0A075B6J1 123 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 TRAV27A0A087WT01 109 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 TRAV40A0A0B4J280 105 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 IGHV3-64DA0A0J9YX35 117 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 FAM90A7PA6NKC0 464 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 CEACAM18A8MTB9 384 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 FAM90A22PA8MWA6 464 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 FAM90A12PA8MX19 464 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 FAM90A23PA8MXZ1 464 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 F5H0A9 414 aaPredicted RBP4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 H3BSA7 217 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 DOK2O60496 412 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 GAGE7O76087 117 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 OR5F1O95221 314 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 VIMP08670 466 aaKnown RBP4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 CST2P09228 141 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 TSPAN19P0C672 248 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 GAGE12FP0CL80 117 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 GAGE12GP0CL81 117 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 GAGE12IP0CL82 117 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 IGHV4-38-2P0DP08 117 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 NR2C1P13056 603 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 IFI30P13284 250 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 GSTM3P21266 225 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 MDKP21741 143 aaPredicted RBP4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 MSR1P21757 451 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 CD80P33681 288 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 RBM34P42696 430 aaKnown RBP4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 GUCA1AP43080 201 aaPredicted RBP4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 HTR5AP47898 357 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 ERFP50548 548 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 ERVFC1-1P60608 527 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 RPL27P61353 136 aaKnown RBP4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 PCBD1P61457 104 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 GAGE1Q13065 139 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 GAGE4Q13068 117 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 ENDOGQ14249 297 aaKnown RBP4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 SLC9A3R2Q15599 337 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 TMEM155Q4W5P6 130 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 PDLIM3Q53GG5 364 aaPredicted RBP4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 ESCO2Q56NI9 601 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 NANOGP8Q6NSW7 305 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 C1orf94Q6P1W5 598 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 CCDC80Q76M96 950 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 ZER1Q7Z7L7 766 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 LRRC28Q86X40 367 aaPredicted RBP4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 OR5AS1Q8N127 324 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 PARP8Q8N3A8 854 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 ZNF283Q8N7M2 679 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 NEXN-AS1Q8NBZ9 246 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 OR52E2Q8NGJ4 325 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 OR51A7Q8NH64 312 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 ZNF420Q8TAQ5 688 aaPredicted RBP4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 RASSF5Q8WWW0 418 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 SLC7A6Q92536 515 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 CMBLQ96DG6 245 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 TPD52L3Q96J77 140 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 SAMD8Q96LT4 415 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 RBP7Q96R05 134 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 OR2V2Q96R30 315 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 GPA33Q99795 319 aa4.3□□□□□ -1.72
RNU4-4P-201ENST00000364588 ALG12Q9BV10 488 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms