RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 EMC6Q9BV81 110 aa2.25□□□□□ -2.05
RNU6-28P-201ENST00000362378 MAP1LC3CQ9BXW4 147 aa2.25□□□□□ -2.05
RNU6-28P-201ENST00000362378 CHRNA10Q9GZZ6 450 aa2.25□□□□□ -2.05
RNU6-28P-201ENST00000362378 C1orf198Q9H425 327 aa2.25□□□□□ -2.05
RNU6-28P-201ENST00000362378 EXOSC4Q9NPD3 245 aaKnown RBP2.25□□□□□ -2.05
RNU6-28P-201ENST00000362378 KLF12Q9Y4X4 402 aa2.25□□□□□ -2.05
RNU6-28P-201ENST00000362378 IGHV2OR16-5A0A0B4J2B6 119 aa2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 IGHV7-4-1A0A0J9YVY3 117 aa2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 C5orf63A6NC05 138 aa2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 GOLGA8JA6NMD2 632 aa2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 NDUFC2-KCTD14E9PQ53 114 aa2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 POLR1CO15160 346 aaPredicted RBP2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 PSPHP1O15172 72 aa2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 MAGEB4O15481 346 aaPredicted RBP2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 EIF1BO60739 113 aaKnown RBP2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 FOXH1O75593 365 aa2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 WISP3O95389 354 aaPredicted RBP2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 TTC4O95801 387 aa2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 PAHP00439 452 aa2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 GOLGA8HP0CJ92 632 aa2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 MUC1P15941 1255 aaPredicted RBP2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 CXCR1P25024 350 aa2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 LOXP28300 417 aaPredicted RBP2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 EIF1P41567 113 aaKnown RBP2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 HCCSP53701 268 aa2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 TAS2R60P59551 318 aa2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 IFITM3Q01628 133 aa2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 ST3GAL4Q11206 333 aa2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 EIF4EBP1Q13541 118 aaPredicted RBP2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 VAMP3Q15836 100 aa2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 CPTPQ5TA50 214 aa2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 TMEM256Q8N2U0 113 aa2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 OR4M1Q8NGD0 313 aa2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 OR1J4Q8NGS1 313 aa2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 LINC01560Q8TB33 94 aa2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 SYNPRQ8TBG9 265 aa2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 RXFP2Q8WXD0 754 aa2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 RERGQ96A58 199 aaPredicted RBP2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 C19orf60Q96EN9 201 aa2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 CENPNQ96H22 339 aaPredicted RBP2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 RNF170Q96K19 258 aa2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 GABRG3Q99928 467 aa2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 SIKE1Q9BRV8 207 aa2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 SFXN3Q9BWM7 321 aa2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 HAUS4Q9H6D7 363 aa2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 NECAP2Q9NVZ3 263 aa2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 RBFOX1Q9NWB1 397 aaKnown RBP2.24□□□□□ -2.05
RNU6-28P-201ENST00000362378 JCADQ9P266 1359 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 IGLV4-60A0A075B6I1 120 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 OR5H1A6NKK0 313 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 RFXANKO14593 260 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 GATCO43716 136 aaKnown RBP2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 SERPINB7O75635 380 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 VAPBO95292 243 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 SMC2O95347 1197 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 CCNE2O96020 404 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 MT-ND4P03905 459 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 TPM1P09493 284 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 ZNF32P17041 273 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 HTR2CP28335 458 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 GNRHRP30968 328 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 APLNRP35414 380 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 ATP5J2P56134 94 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 SLC35A1P78382 337 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 C2orf54Q08AI8 447 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 NAB1Q13506 487 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 MFSD14CQ5VZR4 134 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 TMEM236Q5W0B7 351 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 KDM4DQ6B0I6 523 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 ZFP1Q6P2D0 407 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 OPN5Q6U736 354 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 PID1Q7Z2X4 250 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 MDP1Q86V88 176 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 LGI3Q8N145 548 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 NECAP1Q8NC96 275 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 TTLQ8NG68 377 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 OR51A7Q8NH64 312 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 CACNG8Q8WXS5 425 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 ESR2Q92731 530 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 RBMXL1Q96E39 390 aaKnown RBP2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 OR4K3Q96R72 315 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 TSNAXQ99598 290 aaKnown RBP2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 SPIN2AQ99865 258 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 RNF5Q99942 180 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 SPIN2BQ9BPZ2 258 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 KCNS3Q9BQ31 491 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 ARV1Q9H2C2 271 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 HEBP1Q9NRV9 189 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 RHBDL2Q9NX52 303 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 VAX2Q9UIW0 290 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 SIGLEC7Q9Y286 467 aa2.23□□□□□ -2.05
RNU6-28P-201ENST00000362378 ZNF608Q9ULD9 1512 aaPredicted RBP2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 IGKV2-28A0A075B6P5 120 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 ANKRD20A5PA0PJZ0 165 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 E7EWF7 191 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 H7C2Y5 167 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 MANBAO00462 879 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 ALOX12BO75342 701 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 CCNKO75909 580 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 PTTG1O95997 202 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms