RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 LMX1BO60663 402 aa11.71□□□□□ -0.53
CCDC197-201ENST00000359253 ICMTO60725 284 aa11.71□□□□□ -0.53
CCDC197-201ENST00000359253 TNFSF13O75888 250 aa11.71□□□□□ -0.53
CCDC197-201ENST00000359253 CBR1P16152 277 aa11.71□□□□□ -0.53
CCDC197-201ENST00000359253 AZGP1P25311 298 aaKnown RBP11.71□□□□□ -0.53
CCDC197-201ENST00000359253 GSK3AP49840 483 aa11.71□□□□□ -0.53
CCDC197-201ENST00000359253 CLDN12P56749 244 aa11.71□□□□□ -0.53
CCDC197-201ENST00000359253 TBC1D28Q2M2D7 210 aa11.71□□□□□ -0.53
CCDC197-201ENST00000359253 TMEM69Q5SWH9 247 aa11.71□□□□□ -0.53
CCDC197-201ENST00000359253 CLVS2Q5SYC1 327 aa11.71□□□□□ -0.53
CCDC197-201ENST00000359253 TMEM42Q69YG0 159 aa11.71□□□□□ -0.53
CCDC197-201ENST00000359253 RTL6Q6ICC9 239 aa11.71□□□□□ -0.53
CCDC197-201ENST00000359253 CD163Q86VB7 1156 aa11.71□□□□□ -0.53
CCDC197-201ENST00000359253 OR5AS1Q8N127 324 aa11.71□□□□□ -0.53
CCDC197-201ENST00000359253 GABRG1Q8N1C3 465 aa11.71□□□□□ -0.53
CCDC197-201ENST00000359253 FTMTQ8N4E7 242 aa11.71□□□□□ -0.53
CCDC197-201ENST00000359253 CSNK2A3Q8NEV1 391 aa11.71□□□□□ -0.53
CCDC197-201ENST00000359253 OR4M2Q8NGB6 313 aa11.71□□□□□ -0.53
CCDC197-201ENST00000359253 OR52N4Q8NGI2 321 aa11.71□□□□□ -0.53
CCDC197-201ENST00000359253 SSC4DQ8WTU2 575 aa11.71□□□□□ -0.53
CCDC197-201ENST00000359253 ITPKCQ96DU7 683 aa11.71□□□□□ -0.53
CCDC197-201ENST00000359253 C7orf50Q9BRJ6 194 aaKnown RBP11.71□□□□□ -0.53
CCDC197-201ENST00000359253 THAP7Q9BT49 309 aaPredicted RBP11.71□□□□□ -0.53
CCDC197-201ENST00000359253 SLC22A4Q9H015 551 aa11.71□□□□□ -0.53
CCDC197-201ENST00000359253 PIGMQ9H3S5 423 aa11.71□□□□□ -0.53
CCDC197-201ENST00000359253 C14orf119Q9NWQ9 140 aa11.71□□□□□ -0.53
CCDC197-201ENST00000359253 ZNF835Q9Y2P0 537 aa11.71□□□□□ -0.53
CCDC197-201ENST00000359253 AMDHD2Q9Y303 409 aa11.71□□□□□ -0.53
CCDC197-201ENST00000359253 ARHGAP21Q5T5U3 1957 aa11.7□□□□□ -0.54
CCDC197-201ENST00000359253 ZNF816-ZNF321PA0A0X1KG74 233 aa11.7□□□□□ -0.54
CCDC197-201ENST00000359253 hCG_38984A0A1B0GV85 526 aa11.7□□□□□ -0.54
CCDC197-201ENST00000359253 C5orf49A4QMS7 147 aa11.7□□□□□ -0.54
CCDC197-201ENST00000359253 CENPXA8MT69 81 aa11.7□□□□□ -0.54
CCDC197-201ENST00000359253 GABARAPH6UMI1 98 aa11.7□□□□□ -0.54
CCDC197-201ENST00000359253 ECDO95905 644 aaPredicted RBP11.7□□□□□ -0.54
CCDC197-201ENST00000359253 HCKP08631 526 aa11.7□□□□□ -0.54
CCDC197-201ENST00000359253 OPRM1P35372 400 aa11.7□□□□□ -0.54
CCDC197-201ENST00000359253 FAM3AP98173 230 aa11.7□□□□□ -0.54
CCDC197-201ENST00000359253 HGFACQ04756 655 aa11.7□□□□□ -0.54
CCDC197-201ENST00000359253 SSBP1Q04837 148 aaKnown RBP11.7□□□□□ -0.54
CCDC197-201ENST00000359253 HIKESHIQ53FT3 197 aa11.7□□□□□ -0.54
CCDC197-201ENST00000359253 VWA1Q6PCB0 445 aa11.7□□□□□ -0.54
CCDC197-201ENST00000359253 SEM1Q6ZVN7 128 aa11.7□□□□□ -0.54
CCDC197-201ENST00000359253 SSX8Q7RTT4 187 aa11.7□□□□□ -0.54
CCDC197-201ENST00000359253 CDH24Q86UP0 819 aa11.7□□□□□ -0.54
CCDC197-201ENST00000359253 SNX29P2Q8IUI4 249 aa11.7□□□□□ -0.54
CCDC197-201ENST00000359253 SMIM4Q8WVI0 70 aa11.7□□□□□ -0.54
CCDC197-201ENST00000359253 PIGTQ969N2 578 aa11.7□□□□□ -0.54
CCDC197-201ENST00000359253 ZNF75AQ96N20 296 aa11.7□□□□□ -0.54
CCDC197-201ENST00000359253 ABHD1Q96SE0 405 aa11.7□□□□□ -0.54
CCDC197-201ENST00000359253 REPIN1Q9BWE0 567 aaKnown RBP11.7□□□□□ -0.54
CCDC197-201ENST00000359253 OCEL1Q9H607 264 aa11.7□□□□□ -0.54
CCDC197-201ENST00000359253 CNTD2Q9H8S5 307 aa11.7□□□□□ -0.54
CCDC197-201ENST00000359253 FAIMQ9NVQ4 179 aa11.7□□□□□ -0.54
CCDC197-201ENST00000359253 EIF3KQ9UBQ5 218 aaKnown RBP11.7□□□□□ -0.54
CCDC197-201ENST00000359253 CGGBP1Q9UFW8 167 aaPredicted RBP11.7□□□□□ -0.54
CCDC197-201ENST00000359253 KCNN3Q9UGI6 736 aa11.7□□□□□ -0.54
CCDC197-201ENST00000359253 RHBDD3Q9Y3P4 386 aa11.7□□□□□ -0.54
CCDC197-201ENST00000359253 FAM215AQ9Y5M1 114 aa11.7□□□□□ -0.54
CCDC197-201ENST00000359253 ZNF462Q96JM2 2506 aa11.69□□□□□ -0.54
CCDC197-201ENST00000359253 TMEM272A0A1B0GTI8 110 aa11.69□□□□□ -0.54
CCDC197-201ENST00000359253 SULT1C2O00338 296 aa11.69□□□□□ -0.54
CCDC197-201ENST00000359253 MSTNO14793 375 aa11.69□□□□□ -0.54
CCDC197-201ENST00000359253 CTAG2O75638 210 aa11.69□□□□□ -0.54
CCDC197-201ENST00000359253 CHRM2P08172 466 aa11.69□□□□□ -0.54
CCDC197-201ENST00000359253 GSTT2BP0CG30 244 aa11.69□□□□□ -0.54
CCDC197-201ENST00000359253 ZNF14P17017 642 aaPredicted RBP11.69□□□□□ -0.54
CCDC197-201ENST00000359253 AP3S2P59780 193 aa11.69□□□□□ -0.54
CCDC197-201ENST00000359253 IGFBP7Q16270 282 aa11.69□□□□□ -0.54
CCDC197-201ENST00000359253 C3orf36Q3SXR2 165 aa11.69□□□□□ -0.54
CCDC197-201ENST00000359253 PRR30Q53SZ7 412 aaPredicted RBP11.69□□□□□ -0.54
CCDC197-201ENST00000359253 GFRALQ6UXV0 394 aa11.69□□□□□ -0.54
CCDC197-201ENST00000359253 LHFPL2Q6ZUX7 228 aa11.69□□□□□ -0.54
CCDC197-201ENST00000359253 MDP1Q86V88 176 aa11.69□□□□□ -0.54
CCDC197-201ENST00000359253 ANGPTL5Q86XS5 388 aa11.69□□□□□ -0.54
CCDC197-201ENST00000359253 ZNF584Q8IVC4 421 aa11.69□□□□□ -0.54
CCDC197-201ENST00000359253 SLC30A7Q8NEW0 376 aa11.69□□□□□ -0.54
CCDC197-201ENST00000359253 KCNG3Q8TAE7 436 aa11.69□□□□□ -0.54
CCDC197-201ENST00000359253 FCAMRQ8WWV6 532 aa11.69□□□□□ -0.54
CCDC197-201ENST00000359253 ZC3HAV1LQ96H79 300 aaKnown RBP11.69□□□□□ -0.54
CCDC197-201ENST00000359253 POM121Q96HA1 1249 aa11.69□□□□□ -0.54
CCDC197-201ENST00000359253 GPER1Q99527 375 aa11.69□□□□□ -0.54
CCDC197-201ENST00000359253 SOX7Q9BT81 388 aa11.69□□□□□ -0.54
CCDC197-201ENST00000359253 PCDHB16Q9NRJ7 776 aa11.69□□□□□ -0.54
CCDC197-201ENST00000359253 TBC1D24Q9ULP9 559 aa11.69□□□□□ -0.54
CCDC197-201ENST00000359253 SLC7A11Q9UPY5 501 aa11.69□□□□□ -0.54
CCDC197-201ENST00000359253 MED12LQ86YW9 2145 aa11.68□□□□□ -0.54
CCDC197-201ENST00000359253 PRRC2CQ9Y520 2896 aaKnown RBP11.68□□□□□ -0.54
CCDC197-201ENST00000359253 IGKV1-9A0A0C4DH69 117 aa11.68□□□□□ -0.54
CCDC197-201ENST00000359253 GGT3PA6NGU5 568 aa11.68□□□□□ -0.54
CCDC197-201ENST00000359253 GMDSO60547 372 aa11.68□□□□□ -0.54
CCDC197-201ENST00000359253 RAD51DO75771 328 aa11.68□□□□□ -0.54
CCDC197-201ENST00000359253 NRASP01111 189 aa11.68□□□□□ -0.54
CCDC197-201ENST00000359253 FAHP16930 419 aa11.68□□□□□ -0.54
CCDC197-201ENST00000359253 CDK2P24941 298 aa11.68□□□□□ -0.54
CCDC197-201ENST00000359253 PTH2RP49190 550 aa11.68□□□□□ -0.54
CCDC197-201ENST00000359253 FUT6P51993 359 aa11.68□□□□□ -0.54
CCDC197-201ENST00000359253 ZNF92Q03936 586 aa11.68□□□□□ -0.54
CCDC197-201ENST00000359253 FOXF2Q12947 444 aa11.68□□□□□ -0.54
CCDC197-201ENST00000359253 DYRK1AQ13627 763 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms