RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 NPY1RP25929 384 aa6.58□□□□□ -1.36
VPS13A-202ENST00000357409 Q3ZCU0 254 aa6.58□□□□□ -1.36
VPS13A-202ENST00000357409 TMEM41BQ5BJD5 291 aa6.58□□□□□ -1.36
VPS13A-202ENST00000357409 OR2M7Q8NG81 312 aa6.58□□□□□ -1.36
VPS13A-202ENST00000357409 OLIG1Q8TAK6 271 aa6.58□□□□□ -1.36
VPS13A-202ENST00000357409 MMP24Q9Y5R2 645 aa6.58□□□□□ -1.36
VPS13A-202ENST00000357409 CTSBP07858 339 aa6.58□□□□□ -1.36
VPS13A-202ENST00000357409 CHRM2P08172 466 aa6.58□□□□□ -1.36
VPS13A-202ENST00000357409 EIF1P41567 113 aaKnown RBP6.58□□□□□ -1.36
VPS13A-202ENST00000357409 GFRA1P56159 465 aa6.58□□□□□ -1.36
VPS13A-202ENST00000357409 SLC37A1P57057 533 aa6.58□□□□□ -1.36
VPS13A-202ENST00000357409 MICBQ29980 383 aa6.58□□□□□ -1.36
VPS13A-202ENST00000357409 AFMIDQ63HM1 303 aa6.58□□□□□ -1.36
VPS13A-202ENST00000357409 CDC20BQ86Y33 519 aa6.58□□□□□ -1.36
VPS13A-202ENST00000357409 ADAMTS14Q8WXS8 1223 aa6.58□□□□□ -1.36
VPS13A-202ENST00000357409 ACER3Q9NUN7 267 aa6.58□□□□□ -1.36
VPS13A-202ENST00000357409 LOXHD1Q8IVV2 1947 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 IGHV3OR16-13A0A075B7E8 117 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 IGHV3-74A0A0B4J1X5 117 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 PRSS37A4D1T9 235 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 PRSS44E7EML9 344 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 UBCP0CG48 685 aaKnown RBP6.57□□□□□ -1.36
VPS13A-202ENST00000357409 SULT1A3P0DMM9 295 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 SULT1A4P0DMN0 295 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 PABPC1L2AQ5JQF8 200 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 CDCA4Q9BXL8 241 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 RCL1Q9Y2P8 373 aaKnown RBP6.57□□□□□ -1.36
VPS13A-202ENST00000357409 ABCC6O95255 1503 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 SLC25A5P05141 298 aaKnown RBP6.57□□□□□ -1.36
VPS13A-202ENST00000357409 METTL15P1P0C7V9 234 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 PRF1P14222 555 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 KRTDAPP60985 99 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 TSPO2Q5TGU0 170 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 SLC30A7Q8NEW0 376 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 LOC100289279A0A1B0GTE1 492 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 CDX4O14627 284 aaPredicted RBP6.57□□□□□ -1.36
VPS13A-202ENST00000357409 PPP1CBP62140 327 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 RNF113BQ8IZP6 322 aaKnown RBP6.57□□□□□ -1.36
VPS13A-202ENST00000357409 FLYWCH2Q96CP2 140 aaKnown RBP6.57□□□□□ -1.36
VPS13A-202ENST00000357409 NALCNQ8IZF0 1738 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 IGHV1OR21-1A0A087WYE8 117 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 IGHV3-49A0A0A0MS15 119 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 TARM1B6A8C7 271 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 TBPP20226 339 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 DCTDP32321 178 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 ECI1P42126 302 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 SELENOPP49908 381 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 FABP5Q01469 135 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 SELENBP1Q13228 472 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 FCRL6Q6DN72 434 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 TMEM108Q6UXF1 575 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 MYPOPQ86VE0 399 aaPredicted RBP6.57□□□□□ -1.36
VPS13A-202ENST00000357409 KCNG3Q8TAE7 436 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 ZNF486Q96H40 463 aaPredicted RBP6.57□□□□□ -1.36
VPS13A-202ENST00000357409 GHRLQ9UBU3 117 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 TBX21Q9UL17 535 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 MTCH2Q9Y6C9 303 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 TRAV34A0A0B4J273 112 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 CCL3P10147 92 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 DRD3P35462 400 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 DHODHQ02127 395 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 GDPD1Q8N9F7 314 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 TMED6Q8WW62 240 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 SCARF2Q96GP6 870 aaPredicted RBP6.57□□□□□ -1.36
VPS13A-202ENST00000357409 TMUB1Q9BVT8 246 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 AKIRIN1Q9H9L7 192 aaPredicted RBP6.57□□□□□ -1.36
VPS13A-202ENST00000357409 SIRT7Q9NRC8 400 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 A0A087WUJ7 227 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 FAM87AP0C7U9 286 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 RAB15P59190 212 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 ANKRD55Q3KP44 614 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 PLK5Q496M5 336 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 C1QTNF3Q9BXJ4 246 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 ARNTLO00327 626 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 RGS11O94810 467 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 ADRA2AP08913 450 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 ARR3P36575 388 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 MEF2DQ14814 521 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 KCNIP4Q6PIL6 250 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 MRGPREQ86SM8 312 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 CLDN23Q96B33 292 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 LRP12Q9Y561 859 aa6.57□□□□□ -1.36
VPS13A-202ENST00000357409 MROH1Q8NDA8 1641 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 LRP5LA4QPB2 252 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 AGAP14A8MT82 685 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 ACOT8O14734 319 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 PPICP45877 212 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 TCL1AP56279 114 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 TAS2R46P59540 309 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 KMT5CQ86Y97 462 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 PDLIM5Q96HC4 596 aaKnown RBP6.56□□□□□ -1.36
VPS13A-202ENST00000357409 TMEM74BQ9NUR3 256 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 PRSS50Q9UI38 385 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 TCFL5Q9UL49 500 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 POLDIP2Q9Y2S7 368 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 IGHV3OR16-8A0A075B7F1 116 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 NAT2P11245 290 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 NKG7Q16617 165 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 LRRC28Q86X40 367 aaPredicted RBP6.56□□□□□ -1.36
VPS13A-202ENST00000357409 OR52N4Q8NGI2 321 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms