RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.23□□□□□ -0.29
TRIM13-201ENST00000356017 TPD52L2O43399 206 aaKnown RBP13.23□□□□□ -0.29
TRIM13-201ENST00000356017 PLPP2O43688 288 aa13.23□□□□□ -0.29
TRIM13-201ENST00000356017 LILRA1O75019 489 aa13.23□□□□□ -0.29
TRIM13-201ENST00000356017 CD1AP06126 327 aa13.23□□□□□ -0.29
TRIM13-201ENST00000356017 CD55P08174 381 aa13.23□□□□□ -0.29
TRIM13-201ENST00000356017 EMX1Q04741 257 aaPredicted RBP13.23□□□□□ -0.29
TRIM13-201ENST00000356017 GPR50Q13585 617 aa13.23□□□□□ -0.29
TRIM13-201ENST00000356017 OR8G1Q15617 311 aa13.23□□□□□ -0.29
TRIM13-201ENST00000356017 SPARTQ8N0X7 666 aa13.23□□□□□ -0.29
TRIM13-201ENST00000356017 FCGR1BQ92637 280 aa13.23□□□□□ -0.29
TRIM13-201ENST00000356017 NR1H4Q96RI1 486 aaPredicted RBP13.23□□□□□ -0.29
TRIM13-201ENST00000356017 ACOT13Q9NPJ3 140 aa13.23□□□□□ -0.29
TRIM13-201ENST00000356017 IL19Q9UHD0 177 aa13.23□□□□□ -0.29
TRIM13-201ENST00000356017 RHBDD3Q9Y3P4 386 aa13.23□□□□□ -0.29
TRIM13-201ENST00000356017 ANXA2P2A6NMY6 339 aa13.22□□□□□ -0.29
TRIM13-201ENST00000356017 TNFRSF1AP19438 455 aa13.22□□□□□ -0.29
TRIM13-201ENST00000356017 CELP19835 753 aa13.22□□□□□ -0.29
TRIM13-201ENST00000356017 CDH15P55291 814 aa13.22□□□□□ -0.29
TRIM13-201ENST00000356017 CCL8P80075 99 aa13.22□□□□□ -0.29
TRIM13-201ENST00000356017 TNFAIP6P98066 277 aaPredicted RBP13.22□□□□□ -0.29
TRIM13-201ENST00000356017 SLC3A1Q07837 685 aa13.22□□□□□ -0.29
TRIM13-201ENST00000356017 ZNF367Q7RTV3 350 aa13.22□□□□□ -0.29
TRIM13-201ENST00000356017 GTF3AQ92664 365 aaKnown RBP13.22□□□□□ -0.29
TRIM13-201ENST00000356017 GHSRQ92847 366 aa13.22□□□□□ -0.29
TRIM13-201ENST00000356017 PERPQ96FX8 193 aa13.22□□□□□ -0.29
TRIM13-201ENST00000356017 SAP30LQ9HAJ7 183 aa13.22□□□□□ -0.29
TRIM13-201ENST00000356017 ZNF281Q9Y2X9 895 aa13.22□□□□□ -0.29
TRIM13-201ENST00000356017 SIRT4Q9Y6E7 314 aaPredicted RBP13.22□□□□□ -0.29
TRIM13-201ENST00000356017 ABCA12Q86UK0 2595 aa13.22□□□□□ -0.29
TRIM13-201ENST00000356017 MLNRO43193 412 aa13.21□□□□□ -0.29
TRIM13-201ENST00000356017 SERPINA3P01011 423 aa13.21□□□□□ -0.29
TRIM13-201ENST00000356017 HLA-DPB1P04440 258 aa13.21□□□□□ -0.29
TRIM13-201ENST00000356017 HSMCR30P0CW71 290 aa13.21□□□□□ -0.29
TRIM13-201ENST00000356017 FAHP16930 419 aa13.21□□□□□ -0.29
TRIM13-201ENST00000356017 MAGEB1P43366 347 aa13.21□□□□□ -0.29
TRIM13-201ENST00000356017 MAP2K4P45985 399 aa13.21□□□□□ -0.29
TRIM13-201ENST00000356017 SRP9P49458 86 aaKnown RBP13.21□□□□□ -0.29
TRIM13-201ENST00000356017 MLLT11Q13015 90 aaPredicted RBP13.21□□□□□ -0.29
TRIM13-201ENST00000356017 TESK1Q15569 626 aa13.21□□□□□ -0.29
TRIM13-201ENST00000356017 TSTQ16762 297 aaKnown RBP13.21□□□□□ -0.29
TRIM13-201ENST00000356017 YIF1BQ5BJH7 314 aa13.21□□□□□ -0.29
TRIM13-201ENST00000356017 CLVS2Q5SYC1 327 aa13.21□□□□□ -0.29
TRIM13-201ENST00000356017 CELF2-AS1Q8N7Q2 184 aa13.21□□□□□ -0.29
TRIM13-201ENST00000356017 OR13C3Q8NGS6 347 aa13.21□□□□□ -0.29
TRIM13-201ENST00000356017 OR8S1Q8NH09 359 aa13.21□□□□□ -0.29
TRIM13-201ENST00000356017 GPR148Q8TDV2 347 aa13.21□□□□□ -0.29
TRIM13-201ENST00000356017 PIGCQ92535 297 aa13.21□□□□□ -0.29
TRIM13-201ENST00000356017 HIST1H2AAQ96QV6 131 aa13.21□□□□□ -0.29
TRIM13-201ENST00000356017 MGLLQ99685 303 aa13.21□□□□□ -0.29
TRIM13-201ENST00000356017 FOXC2Q99958 501 aa13.21□□□□□ -0.29
TRIM13-201ENST00000356017 ADAT1Q9BUB4 502 aaKnown RBP13.21□□□□□ -0.29
TRIM13-201ENST00000356017 ZNF696Q9H7X3 374 aa13.21□□□□□ -0.29
TRIM13-201ENST00000356017 MYOZ1Q9NP98 299 aaPredicted RBP13.21□□□□□ -0.29
TRIM13-201ENST00000356017 C14orf119Q9NWQ9 140 aa13.21□□□□□ -0.29
TRIM13-201ENST00000356017 SPG11Q96JI7 2443 aa13.21□□□□□ -0.29
TRIM13-201ENST00000356017 TACC2O95359 2948 aa13.21□□□□□ -0.29
TRIM13-201ENST00000356017 A0A087WXM4 84 aa13.21□□□□□ -0.3
TRIM13-201ENST00000356017 MRPS11P82912 194 aaKnown RBP13.21□□□□□ -0.3
TRIM13-201ENST00000356017 AKAP6Q13023 2319 aa13.21□□□□□ -0.3
TRIM13-201ENST00000356017 PRDX4Q13162 271 aa13.21□□□□□ -0.3
TRIM13-201ENST00000356017 TMEM42Q69YG0 159 aa13.21□□□□□ -0.3
TRIM13-201ENST00000356017 MS4A15Q8N5U1 240 aa13.21□□□□□ -0.3
TRIM13-201ENST00000356017 ZFP41Q8N8Y5 198 aa13.21□□□□□ -0.3
TRIM13-201ENST00000356017 TSPAN14Q8NG11 270 aa13.21□□□□□ -0.3
TRIM13-201ENST00000356017 OR10AD1Q8NGE0 317 aa13.21□□□□□ -0.3
TRIM13-201ENST00000356017 OR51A4Q8NGJ6 313 aa13.21□□□□□ -0.3
TRIM13-201ENST00000356017 PP6455Q8WZ26 134 aa13.21□□□□□ -0.3
TRIM13-201ENST00000356017 UFD1Q92890 307 aa13.21□□□□□ -0.3
TRIM13-201ENST00000356017 PGLYRP3Q96LB9 341 aa13.21□□□□□ -0.3
TRIM13-201ENST00000356017 ZNF275Q9NSD4 429 aaPredicted RBP13.21□□□□□ -0.3
TRIM13-201ENST00000356017 DHDHQ9UQ10 334 aa13.21□□□□□ -0.3
TRIM13-201ENST00000356017 PNMA8CA0A1B0GUJ8 204 aa13.2□□□□□ -0.3
TRIM13-201ENST00000356017 ZNF850A8MQ14 1090 aa13.2□□□□□ -0.3
TRIM13-201ENST00000356017 F5H5P2 479 aa13.2□□□□□ -0.3
TRIM13-201ENST00000356017 H0YL77 283 aa13.2□□□□□ -0.3
TRIM13-201ENST00000356017 H3BSH0 61 aa13.2□□□□□ -0.3
TRIM13-201ENST00000356017 NDUFS7O75251 213 aa13.2□□□□□ -0.3
TRIM13-201ENST00000356017 NRASP01111 189 aa13.2□□□□□ -0.3
TRIM13-201ENST00000356017 IGHV4-39P01824 125 aa13.2□□□□□ -0.3
TRIM13-201ENST00000356017 CD2P06729 351 aa13.2□□□□□ -0.3
TRIM13-201ENST00000356017 ZNF20P17024 532 aa13.2□□□□□ -0.3
TRIM13-201ENST00000356017 TPBGQ13641 420 aa13.2□□□□□ -0.3
TRIM13-201ENST00000356017 UBE2UQ5VVX9 321 aa13.2□□□□□ -0.3
TRIM13-201ENST00000356017 ZDHHC23Q8IYP9 409 aa13.2□□□□□ -0.3
TRIM13-201ENST00000356017 UBASH3BQ8TF42 649 aa13.2□□□□□ -0.3
TRIM13-201ENST00000356017 TSEN15Q8WW01 171 aaKnown RBP13.2□□□□□ -0.3
TRIM13-201ENST00000356017 THRSPQ92748 146 aa13.2□□□□□ -0.3
TRIM13-201ENST00000356017 TECTBQ96PL2 329 aa13.2□□□□□ -0.3
TRIM13-201ENST00000356017 OR2V2Q96R30 315 aa13.2□□□□□ -0.3
TRIM13-201ENST00000356017 MICU1Q9BPX6 476 aa13.2□□□□□ -0.3
TRIM13-201ENST00000356017 CXXC4Q9H2H0 198 aa13.2□□□□□ -0.3
TRIM13-201ENST00000356017 ARFGEF3Q5TH69 2177 aa13.2□□□□□ -0.3
TRIM13-201ENST00000356017 ANKRD61A6NGH8 418 aa13.19□□□□□ -0.3
TRIM13-201ENST00000356017 SSX4O60224 188 aa13.19□□□□□ -0.3
TRIM13-201ENST00000356017 GATBO75879 557 aaKnown RBP13.19□□□□□ -0.3
TRIM13-201ENST00000356017 HPXP02790 462 aa13.19□□□□□ -0.3
TRIM13-201ENST00000356017 OCM2P0CE71 109 aa13.19□□□□□ -0.3
TRIM13-201ENST00000356017 DAOP14920 347 aa13.19□□□□□ -0.3
TRIM13-201ENST00000356017 PCMT1P22061 227 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms