RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 EXD3Q8N9H8 876 aa14□□□□□ -0.17
RTN3-205ENST00000356000 SLC26A10Q8NG04 563 aa14□□□□□ -0.17
RTN3-205ENST00000356000 MS4A8Q9BY19 250 aa14□□□□□ -0.17
RTN3-205ENST00000356000 NKX2-4Q9H2Z4 354 aa14□□□□□ -0.17
RTN3-205ENST00000356000 GPR132Q9UNW8 380 aa14□□□□□ -0.17
RTN3-205ENST00000356000 CBY3A6NI87 242 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 A6NIZ1 184 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 OR2AG2A6NM03 316 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 ZNF217O75362 1048 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 IFNA6P05013 189 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 P2RY1P47900 373 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 CEBPGP53567 150 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 CCL20P78556 96 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 CACUL1Q86Y37 369 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 ZNF676Q8N7Q3 588 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 NPEPL1Q8NDH3 523 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 OR1L6Q8NGR2 347 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 OR6K6Q8NGW6 343 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 SLC35E1Q96K37 410 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 PRRX2Q99811 253 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 FAM83CQ9BQN1 747 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 C5orf66Q9H5L9 145 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 WDR45Q9Y484 360 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 TMEM212A6NML5 194 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 ZNF264O43296 627 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 DEDDO75618 318 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 C1orf105O95561 183 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 OPN1MWP04001 364 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 HSPB1P04792 205 aaKnown RBP13.99□□□□□ -0.17
RTN3-205ENST00000356000 OPN1MW2P0DN77 364 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 OPN1MW3P0DN78 364 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 OR3A2P47893 321 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 SUPT4H1P63272 117 aaKnown RBP13.99□□□□□ -0.17
RTN3-205ENST00000356000 PSG6Q00889 435 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 SLC22A6Q4U2R8 563 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 ZNF550Q7Z398 422 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 CYB561D1Q8N8Q1 229 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 CDS1Q92903 461 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 SH3BGRL2Q9UJC5 107 aa13.99□□□□□ -0.17
RTN3-205ENST00000356000 A0A1B0GVT2 93 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 TNFSF13O75888 250 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 CYB5R3P00387 301 aaPredicted RBP13.98□□□□□ -0.17
RTN3-205ENST00000356000 IGHEP01854 428 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 MAPK8P45983 427 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 CRYBB1P53674 252 aaPredicted RBP13.98□□□□□ -0.17
RTN3-205ENST00000356000 CLDN2P57739 230 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 P2RY6Q15077 328 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 ELOA3BQ3SY89 546 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 ZNF260Q3ZCT1 412 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 C1orf189Q5VU69 101 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 CNKSR3Q6P9H4 555 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 KMT5CQ86Y97 462 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 TMEM156Q8N614 296 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 RCBTB1Q8NDN9 531 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 ELOA3Q8NG57 546 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 OR8G5Q8NG78 346 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 FAM213BQ8TBF2 198 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 SUSD3Q96L08 255 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 CSTL1Q9H114 145 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 MED19A0JLT2 244 aaPredicted RBP13.98□□□□□ -0.17
RTN3-205ENST00000356000 A6NCN8 305 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 NDUFS8O00217 210 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 CXCL10P02778 98 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 CKMP06732 381 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 SMIM10L2AP0DMW4 78 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 SMIM10L2BP0DMW5 78 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 ADGRE4PQ86SQ3 457 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 THRSPQ92748 146 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 CORO2AQ92828 525 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 KTI12Q96EK9 354 aaPredicted RBP13.98□□□□□ -0.17
RTN3-205ENST00000356000 TPSD1Q9BZJ3 242 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 WFDC1Q9HC57 220 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 GPR35Q9HC97 309 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 KIAA1456Q9P272 454 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 SLC25A13Q9UJS0 675 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 NUMA1Q14980 2115 aa13.98□□□□□ -0.17
RTN3-205ENST00000356000 LOC105371242A0A075B767 164 aa13.97□□□□□ -0.17
RTN3-205ENST00000356000 SYNDIG1LA6NDD5 238 aa13.97□□□□□ -0.17
RTN3-205ENST00000356000 CEACAM18A8MTB9 384 aa13.97□□□□□ -0.17
RTN3-205ENST00000356000 H3BSH0 61 aa13.97□□□□□ -0.17
RTN3-205ENST00000356000 FAM189A2Q15884 450 aa13.97□□□□□ -0.17
RTN3-205ENST00000356000 C1orf185Q5T7R7 199 aa13.97□□□□□ -0.17
RTN3-205ENST00000356000 SPSB3Q6PJ21 355 aa13.97□□□□□ -0.17
RTN3-205ENST00000356000 STT3BQ8TCJ2 826 aa13.97□□□□□ -0.17
RTN3-205ENST00000356000 CABLES2Q9BTV7 478 aa13.97□□□□□ -0.17
RTN3-205ENST00000356000 NUDT9Q9BW91 350 aa13.97□□□□□ -0.17
RTN3-205ENST00000356000 SH3BGRL3Q9H299 93 aa13.97□□□□□ -0.17
RTN3-205ENST00000356000 MTHFD2LQ9H903 347 aaPredicted RBP13.97□□□□□ -0.17
RTN3-205ENST00000356000 RXFP3Q9NSD7 469 aa13.97□□□□□ -0.17
RTN3-205ENST00000356000 IER3IP1Q9Y5U9 82 aa13.97□□□□□ -0.17
RTN3-205ENST00000356000 WSB1Q9Y6I7 421 aa13.97□□□□□ -0.17
RTN3-205ENST00000356000 CHD3Q12873 2000 aaKnown RBP13.97□□□□□ -0.17
RTN3-205ENST00000356000 TRIP12Q14669 1992 aaPredicted RBP13.97□□□□□ -0.17
RTN3-205ENST00000356000 A0A1B0GU03 582 aa13.97□□□□□ -0.17
RTN3-205ENST00000356000 A0A1W2PS29 197 aa13.97□□□□□ -0.17
RTN3-205ENST00000356000 WIPF3A6NGB9 483 aa13.97□□□□□ -0.17
RTN3-205ENST00000356000 TSPAN6O43657 245 aa13.97□□□□□ -0.17
RTN3-205ENST00000356000 NUDT21O43809 227 aaKnown RBP13.97□□□□□ -0.17
RTN3-205ENST00000356000 NDUFB8O95169 186 aa13.97□□□□□ -0.17
RTN3-205ENST00000356000 HOXC8P31273 242 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms