RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 ELSPBP1Q96BH3 223 aa12.09□□□□□ -0.47
TRIM4-203ENST00000355947 SCARF2Q96GP6 870 aaPredicted RBP12.09□□□□□ -0.47
TRIM4-203ENST00000355947 TCRBV21S2A2A0A5A6 115 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 FAM221BA6H8Z2 402 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 CDRT15L2A8MXV6 281 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 STMND1H3BQB6 276 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 FAM157CP0CG43 387 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 SPINK2P20155 84 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 LAP3P28838 519 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 CRABP1P29762 137 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 VEGFBP49765 207 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 GSK3AP49840 483 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 TAS2R31P59538 309 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 CDPF1Q6NVV7 123 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 IL34Q6ZMJ4 242 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 HIST2H3AQ71DI3 136 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 ZDHHC22Q8N966 263 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 OR14K1Q8NGZ2 314 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 ERGIC1Q969X5 290 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 MRPL24Q96A35 216 aaKnown RBP12.08□□□□□ -0.48
TRIM4-203ENST00000355947 GPX7Q96SL4 187 aaPredicted RBP12.08□□□□□ -0.48
TRIM4-203ENST00000355947 ZNF2Q9BSG1 426 aaPredicted RBP12.08□□□□□ -0.48
TRIM4-203ENST00000355947 DUSP15Q9H1R2 295 aaPredicted RBP12.08□□□□□ -0.48
TRIM4-203ENST00000355947 SH3BGRL3Q9H299 93 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 TXNIPQ9H3M7 391 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 CARHSP1Q9Y2V2 147 aaKnown RBP12.08□□□□□ -0.48
TRIM4-203ENST00000355947 CELSR3Q9NYQ7 3312 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 A0A1W2PNR3 127 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 PQLC2LA1A4F0 135 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 RER1O15258 196 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 FGF16O43320 207 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 SFT2D2O95562 160 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 IFNA2P01563 188 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 RNF224P0DH78 156 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 TMEM225BP0DP42 221 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 CD79AP11912 226 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 CX3CR1P49238 355 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 EIF5AP63241 154 aaKnown RBP12.08□□□□□ -0.48
TRIM4-203ENST00000355947 CLEC12BQ2HXU8 276 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 PLAC9Q5JTB6 97 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 SULF2Q8IWU5 870 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 ZNF561Q8N587 486 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 TMEM217Q8N7C4 229 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 AQP3Q92482 292 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 THRSPQ92748 146 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 C2orf50Q96LR7 162 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 GPHA2Q96T91 129 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 CNTNAP3Q9BZ76 1288 aa12.08□□□□□ -0.48
TRIM4-203ENST00000355947 KLF2Q9Y5W3 355 aaPredicted RBP12.08□□□□□ -0.48
TRIM4-203ENST00000355947 ANGPTL7O43827 346 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 PET100P0DJ07 73 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 THEGLP0DJG4 465 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 DEFA6Q01524 100 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 ZNF343Q6P1L6 599 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 OGFOD3Q6PK18 319 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 PLXDC2Q6UX71 529 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 C6orf201Q7Z4U5 140 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 TMEM230Q96A57 120 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 SLC2A8Q9NY64 477 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 SLCO1B1Q9Y6L6 691 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 IGLV1-36A0A0B4J1U3 117 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 OR2C1O95371 312 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 BGLAPP02818 100 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 CSTBP04080 98 aaKnown RBP12.07□□□□□ -0.48
TRIM4-203ENST00000355947 RAB5AP20339 215 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 LRRC18Q8N456 261 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 OR13G1Q8NGZ3 307 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 C8orf44Q96CB5 159 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 MAGT1Q9H0U3 335 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 SLC17A5Q9NRA2 495 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 COPS7AQ9UBW8 275 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 ABCA7Q8IZY2 2146 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 ZNHIT1O43257 154 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 TTRP02766 147 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 S100A8P05109 93 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 FBP1P09467 338 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 NOVA1P51513 510 aaKnown RBP12.07□□□□□ -0.48
TRIM4-203ENST00000355947 CLRN1P58418 232 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 LANCL3Q6ZV70 420 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 WDFY1Q8IWB7 410 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 OR10D4PQ8NGN7 298 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 S1PR5Q9H228 398 aa12.07□□□□□ -0.48
TRIM4-203ENST00000355947 ZNF407Q9C0G0 2248 aa12.06□□□□□ -0.48
TRIM4-203ENST00000355947 TNFSF14O43557 240 aa12.06□□□□□ -0.48
TRIM4-203ENST00000355947 EIF1BO60739 113 aaKnown RBP12.06□□□□□ -0.48
TRIM4-203ENST00000355947 SMIM6P0DI80 62 aa12.06□□□□□ -0.48
TRIM4-203ENST00000355947 ACKR3P25106 362 aa12.06□□□□□ -0.48
TRIM4-203ENST00000355947 EIF1P41567 113 aaKnown RBP12.06□□□□□ -0.48
TRIM4-203ENST00000355947 SULT1A1P50225 295 aa12.06□□□□□ -0.48
TRIM4-203ENST00000355947 P2RY4P51582 365 aa12.06□□□□□ -0.48
TRIM4-203ENST00000355947 SSBP1Q04837 148 aaKnown RBP12.06□□□□□ -0.48
TRIM4-203ENST00000355947 SGCBQ16585 318 aa12.06□□□□□ -0.48
TRIM4-203ENST00000355947 EMC4Q5J8M3 183 aa12.06□□□□□ -0.48
TRIM4-203ENST00000355947 SLC25A24Q6NUK1 477 aa12.06□□□□□ -0.48
TRIM4-203ENST00000355947 ZNF600Q6ZNG1 722 aa12.06□□□□□ -0.48
TRIM4-203ENST00000355947 ZFP62Q8NB50 900 aaPredicted RBP12.06□□□□□ -0.48
TRIM4-203ENST00000355947 RPS4Y2Q8TD47 263 aa12.06□□□□□ -0.48
TRIM4-203ENST00000355947 LMX1AQ8TE12 382 aa12.06□□□□□ -0.48
TRIM4-203ENST00000355947 RARRES2Q99969 163 aa12.06□□□□□ -0.48
TRIM4-203ENST00000355947 EDEM2Q9BV94 578 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms