RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 PRRX2Q99811 253 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 SUCNR1Q9BXA5 334 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 RTN4RQ9BZR6 473 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 LPAR5Q9H1C0 372 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 SMOC1Q9H4F8 434 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 RCL1Q9Y2P8 373 aaKnown RBP16.75■□□□□ 0.27
PRPF39-201ENST00000355765 ZNF726A6NNF4 738 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 KAT7O95251 611 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 NUDT14O95848 222 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 SOD3P08294 240 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 CXCL1P09341 107 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 SERPINA2P20848 420 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 GABRA4P48169 554 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 REC114Q7Z4M0 266 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 HSD17B11Q8NBQ5 300 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 MFSD8Q8NHS3 518 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 NTNG2Q96CW9 530 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 MUC22E2RYF6 1773 aaPredicted RBP16.75■□□□□ 0.27
PRPF39-201ENST00000355765 A0A087X0M5 115 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 A0A1B0GX30 115 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 H0Y8X5 98 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 BGLAPP02818 100 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 GAPDHP04406 335 aaKnown RBP16.75■□□□□ 0.27
PRPF39-201ENST00000355765 DANCRP0C864 163 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 CXCR1P25024 350 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 DDTP30046 118 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 PTGER4P35408 488 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 SSX2Q16385 188 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 PCK2Q16822 640 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 GLIPR1L1Q6UWM5 242 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 Q7L0L9 218 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 DGAT2Q96PD7 388 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 ADAM19Q9H013 955 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 WFDC1Q9HC57 220 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 EHFQ9NZC4 300 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 LUZP4Q9P127 313 aa16.75■□□□□ 0.27
PRPF39-201ENST00000355765 SCDO00767 359 aa16.74■□□□□ 0.27
PRPF39-201ENST00000355765 SOHLH1Q5JUK2 328 aa16.74■□□□□ 0.27
PRPF39-201ENST00000355765 VAX1Q5SQQ9 334 aa16.74■□□□□ 0.27
PRPF39-201ENST00000355765 ZNF610Q8N9Z0 462 aa16.74■□□□□ 0.27
PRPF39-201ENST00000355765 MUCL1Q96DR8 90 aa16.74■□□□□ 0.27
PRPF39-201ENST00000355765 ARHGAP5-AS1Q96IT6 56 aa16.74■□□□□ 0.27
PRPF39-201ENST00000355765 SSX3Q99909 188 aa16.74■□□□□ 0.27
PRPF39-201ENST00000355765 S1PR5Q9H228 398 aa16.74■□□□□ 0.27
PRPF39-201ENST00000355765 BTBD17A6NE02 478 aa16.74■□□□□ 0.27
PRPF39-201ENST00000355765 CHATP28329 748 aa16.74■□□□□ 0.27
PRPF39-201ENST00000355765 KHDC3LQ587J8 217 aa16.74■□□□□ 0.27
PRPF39-201ENST00000355765 MAMDC2Q7Z304 686 aaPredicted RBP16.74■□□□□ 0.27
PRPF39-201ENST00000355765 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.74■□□□□ 0.27
PRPF39-201ENST00000355765 METTL27Q8N6F8 245 aaPredicted RBP16.74■□□□□ 0.27
PRPF39-201ENST00000355765 C19orf47Q8N9M1 422 aaKnown RBP16.74■□□□□ 0.27
PRPF39-201ENST00000355765 Q8WTZ3 238 aa16.74■□□□□ 0.27
PRPF39-201ENST00000355765 DEDDO75618 318 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 F10P00742 488 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 HSD11B1P28845 292 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 ZNF93P35789 620 aaPredicted RBP16.73■□□□□ 0.27
PRPF39-201ENST00000355765 RBMXP38159 391 aaKnown RBP16.73■□□□□ 0.27
PRPF39-201ENST00000355765 GPR3P46089 330 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 TMEM50BP56557 158 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 LSM6P62312 80 aaKnown RBP16.73■□□□□ 0.27
PRPF39-201ENST00000355765 CSNK2A1P68400 391 aaPredicted RBP16.73■□□□□ 0.27
PRPF39-201ENST00000355765 SLC35A1P78382 337 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 C2orf27AQ580R0 203 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 FNDC7Q5VTL7 733 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 PEG10Q86TG7 708 aaKnown RBP16.73■□□□□ 0.27
PRPF39-201ENST00000355765 TMEM156Q8N614 296 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 SUMF2Q8NBJ7 301 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 APCDD1LQ8NCL9 501 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 CSNK2A3Q8NEV1 391 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 ZNF519Q8TB69 540 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 RFNGQ9Y644 331 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 ARGFXA6NJG6 315 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 TMEM14DPA8MWL7 114 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 XRCC2O43543 280 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 HIST1H2BKO60814 126 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 HIST1H2BJP06899 126 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 HLA-DOBP13765 273 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 HIST1H1DP16402 221 aaKnown RBP16.73■□□□□ 0.27
PRPF39-201ENST00000355765 ZNF823P16415 610 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 BTF3P20290 206 aaKnown RBP16.73■□□□□ 0.27
PRPF39-201ENST00000355765 HIST1H2BOP23527 126 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 HIST1H2BBP33778 126 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 HIST1H2BDP58876 126 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 TAS2R60P59551 318 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 HIST1H2BCP62807 126 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 RAB1AP62820 205 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 HIST2H2BEQ16778 126 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.73■□□□□ 0.27
PRPF39-201ENST00000355765 FNDC9Q8TBE3 224 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 FAM213BQ8TBF2 198 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 HIST1H2BHQ93079 126 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 MRPL24Q96A35 216 aaKnown RBP16.73■□□□□ 0.27
PRPF39-201ENST00000355765 TCTN2Q96GX1 697 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 HIST1H2BNQ99877 126 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 HIST1H2BMQ99879 126 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 OR11A1Q9GZK7 315 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 UBQLN4Q9NRR5 601 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 PCNX3Q9H6A9 2034 aa16.73■□□□□ 0.27
PRPF39-201ENST00000355765 TERTO14746 1132 aaKnown RBP16.72■□□□□ 0.27
PRPF39-201ENST00000355765 SYT7O43581 403 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms