RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 LY86O95711 162 aa11.47□□□□□ -0.57
SYNCRIP-201ENST00000355238 FBP1P09467 338 aa11.47□□□□□ -0.57
SYNCRIP-201ENST00000355238 SHBQ15464 509 aa11.47□□□□□ -0.57
SYNCRIP-201ENST00000355238 CDCA3Q99618 268 aaPredicted RBP11.47□□□□□ -0.57
SYNCRIP-201ENST00000355238 SLC2A9Q9NRM0 540 aa11.47□□□□□ -0.57
SYNCRIP-201ENST00000355238 C7orf77A4D0Y5 90 aa11.47□□□□□ -0.57
SYNCRIP-201ENST00000355238 TBXA2RP21731 343 aa11.47□□□□□ -0.57
SYNCRIP-201ENST00000355238 DPTQ07507 201 aa11.47□□□□□ -0.57
SYNCRIP-201ENST00000355238 UBE3DQ7Z6J8 389 aa11.47□□□□□ -0.57
SYNCRIP-201ENST00000355238 ABI3BPQ7Z7G0 1075 aa11.47□□□□□ -0.57
SYNCRIP-201ENST00000355238 ADIPOR1Q96A54 375 aa11.47□□□□□ -0.57
SYNCRIP-201ENST00000355238 PCED1AQ9H1Q7 454 aa11.47□□□□□ -0.57
SYNCRIP-201ENST00000355238 CXCL16Q9H2A7 254 aa11.47□□□□□ -0.57
SYNCRIP-201ENST00000355238 OPN4Q9UHM6 478 aa11.47□□□□□ -0.57
SYNCRIP-201ENST00000355238 MAP1LC3B2A6NCE7 125 aa11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 SDHBP21912 280 aa11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 OR10J1P30954 320 aa11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 LSRQ86X29 649 aaPredicted RBP11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 PP6455Q8WZ26 134 aa11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 ADGRG7Q96K78 797 aa11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 MAP1LC3BQ9GZQ8 125 aa11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 FAM221AA4D161 298 aa11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 TTRP02766 147 aa11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 DEFA4P12838 97 aa11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 CD38P28907 300 aa11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 EDDM3AQ14507 147 aa11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 ANAPC16Q96DE5 110 aa11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 CALHM2Q9HA72 323 aa11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 RASL12Q9NYN1 266 aa11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 NTMQ9P121 344 aa11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 NAT8Q9UHE5 227 aa11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 SIGLEC7Q9Y286 467 aa11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 TRAV34A0A0B4J273 112 aa11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 MASP2O00187 686 aa11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 FCN1O00602 326 aa11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 PLA2G10O15496 165 aa11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 ARG1P05089 322 aa11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 NAT2P11245 290 aa11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 OR2A1Q8NGT9 310 aa11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 NAT6Q93015 286 aa11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 CCDC74AQ96AQ1 378 aa11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 PIK3IP1Q96FE7 263 aa11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 MIXL1Q9H2W2 232 aa11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 PITPNC1Q9UKF7 332 aa11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 ST3GAL6Q9Y274 331 aa11.46□□□□□ -0.57
SYNCRIP-201ENST00000355238 NUMA1Q14980 2115 aa11.46□□□□□ -0.58
SYNCRIP-201ENST00000355238 GPANK1O95872 356 aa11.46□□□□□ -0.58
SYNCRIP-201ENST00000355238 SULT1A1P50225 295 aa11.46□□□□□ -0.58
SYNCRIP-201ENST00000355238 DYNLRB1Q9NP97 96 aa11.46□□□□□ -0.58
SYNCRIP-201ENST00000355238 GOLT1BQ9Y3E0 138 aa11.46□□□□□ -0.58
SYNCRIP-201ENST00000355238 A0A1W2PPE2 198 aa11.46□□□□□ -0.58
SYNCRIP-201ENST00000355238 TOX3O15405 576 aaPredicted RBP11.46□□□□□ -0.58
SYNCRIP-201ENST00000355238 HIST1H1DP16402 221 aaKnown RBP11.46□□□□□ -0.58
SYNCRIP-201ENST00000355238 INSL4Q14641 139 aa11.46□□□□□ -0.58
SYNCRIP-201ENST00000355238 SHHQ15465 462 aa11.46□□□□□ -0.58
SYNCRIP-201ENST00000355238 FAM209BQ5JX69 171 aa11.46□□□□□ -0.58
SYNCRIP-201ENST00000355238 LYRM7Q5U5X0 104 aa11.46□□□□□ -0.58
SYNCRIP-201ENST00000355238 NDFIP1Q9BT67 221 aa11.46□□□□□ -0.58
SYNCRIP-201ENST00000355238 KIAA1324LA8MWY0 1029 aaPredicted RBP11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 ABCD4O14678 606 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 OR5G3P0C626 314 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 MS4A7Q9GZW8 240 aaPredicted RBP11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 ZNF737O75373 536 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 CD46P15529 392 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 COX19Q49B96 90 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 LDLRAD1Q5T700 205 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 STUMQ69YW2 141 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 RNASEKQ6P5S7 137 aaKnown RBP11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 TMEM104Q8NE00 496 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 OR5C1Q8NGR4 320 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 OR2T10Q8NGZ9 312 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 IFI44Q8TCB0 444 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 DPF1Q92782 380 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 ISOC2Q96AB3 205 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 TBX19O60806 448 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 GRPP07492 148 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 ERHP84090 104 aaKnown RBP11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 OR10A7Q8NGE5 316 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 RGPD1P0DJD0 1748 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 MYO5AQ9Y4I1 1855 aaKnown RBP11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 SERTM1A2A2V5 107 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 H3BP45 60 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 EMDP50402 254 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 GPM6AP51674 278 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 WNT3P56703 355 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 MRPS21P82921 87 aaKnown RBP11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 PRR27Q6MZM9 219 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 OR2C3Q8N628 320 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 WFDC5Q8TCV5 224 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 OXGR1Q96P68 337 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 MICAL3Q7RTP6 2002 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 MBPP02686 304 aaPredicted RBP11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 ZNF273Q14593 569 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 RTL8BQ17RB0 113 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 ZNF468Q5VIY5 522 aaPredicted RBP11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 FAM109BQ6ICB4 259 aaPredicted RBP11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 KIRREL2Q6UWL6 708 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 LYPD8Q6UX82 237 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 OR10C1Q96KK4 312 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 TMPRSS13Q9BYE2 586 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms