RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 SLC39A7Q92504 469 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 NDFIP1Q9BT67 221 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 IGHV1OR21-1A0A087WYE8 117 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 HYAL3O43820 417 aaPredicted RBP11.87□□□□□ -0.51
SCN8A-202ENST00000355133 OR2C1O95371 312 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 BMP5P22003 454 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 OR2T2Q6IF00 324 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 OTOSQ8NHW6 89 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 MRGPRX3Q96LB0 322 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 KLK11Q9UBX7 282 aa11.87□□□□□ -0.51
SCN8A-202ENST00000355133 H7BYZ3 331 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 TRA2AQ13595 282 aaKnown RBP eCLIP11.86□□□□□ -0.51
SCN8A-202ENST00000355133 KIAA0141Q14154 515 aaPredicted RBP11.86□□□□□ -0.51
SCN8A-202ENST00000355133 IL11RAQ14626 422 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 STUMQ69YW2 141 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 C16orf47Q6ZP98 133 aaPredicted RBP11.86□□□□□ -0.51
SCN8A-202ENST00000355133 SH2D5Q6ZV89 423 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 C1orf210Q8IVY1 113 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 DYNC2LI1Q8TCX1 351 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 ACY3Q96HD9 319 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 ESRP2Q9H6T0 727 aaKnown RBP11.86□□□□□ -0.51
SCN8A-202ENST00000355133 CLCF1Q9UBD9 225 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 RCL1Q9Y2P8 373 aaKnown RBP11.86□□□□□ -0.51
SCN8A-202ENST00000355133 TEX51A0A1B0GUA7 166 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 FXYD1O00168 92 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 GNG10P50151 68 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 ZNF787Q6DD87 383 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 BTNL8Q6UX41 500 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 MAMSTRQ6ZN01 415 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 EXTL1Q92935 676 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 PELI1Q96FA3 418 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 ZNF416Q9BWM5 594 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 PCED1AQ9H1Q7 454 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 PPP5D1E7EU14 171 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 COX7A2P2O60397 106 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 CDC14BO60729 498 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 EPXP11678 715 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 SRSF5Q13243 272 aaKnown RBP11.86□□□□□ -0.51
SCN8A-202ENST00000355133 GPNMBQ14956 572 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 PRR27Q6MZM9 219 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 LYG2Q86SG7 212 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 OR10Z1Q8NGY1 313 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 MOB3AQ96BX8 217 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 YIPF6Q96EC8 236 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 FAM103A1Q9BTL3 118 aaKnown RBP11.86□□□□□ -0.51
SCN8A-202ENST00000355133 TIMM9Q9Y5J7 89 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 EVPLQ92817 2033 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 ZNF727A8MUV8 499 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 AQP8O94778 261 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 LILRA6Q6PI73 481 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 LINC01555Q8NAE3 123 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 OR4S1Q8NGB4 309 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 OR4C16Q8NGL9 310 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 OR4C3Q8NH37 302 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 ZNF251Q9BRH9 671 aa11.86□□□□□ -0.51
SCN8A-202ENST00000355133 IGHV1OR15-9A0A0B4J2B8 117 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 A0A0B4J2E0 115 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 A0A1B0GX12 115 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 H3BP45 60 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 CYTIPO60759 359 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 TNFRSF1AP19438 455 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 FZD5Q13467 585 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 ACER2Q5QJU3 275 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 RELL2Q8NC24 303 aaPredicted RBP11.85□□□□□ -0.51
SCN8A-202ENST00000355133 C2orf50Q96LR7 162 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 CIB3Q96Q77 187 aaPredicted RBP11.85□□□□□ -0.51
SCN8A-202ENST00000355133 MMP25Q9NPA2 562 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 ZNF71Q9NQZ8 489 aaPredicted RBP11.85□□□□□ -0.51
SCN8A-202ENST00000355133 SLC35D1Q9NTN3 355 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 PDGFBP01127 241 aaPredicted RBP11.85□□□□□ -0.51
SCN8A-202ENST00000355133 HOXB3P14651 431 aaPredicted RBP11.85□□□□□ -0.51
SCN8A-202ENST00000355133 FGF7P21781 194 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 ZBTB25P24278 435 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 TFF2Q03403 129 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 OR5I1Q13606 314 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 TIGITQ495A1 244 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 OR8B4Q96RC9 309 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 C19orf43Q9BQ61 176 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 CLEC18AA5D8T8 446 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 OR5H15A6NDH6 313 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 OR5H1A6NKK0 313 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 DEFB108AA8MXU0 73 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 M0QZ24 198 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 MBTPS2O43462 519 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 RPUSD3Q6P087 351 aaKnown RBP11.85□□□□□ -0.51
SCN8A-202ENST00000355133 UBE3DQ7Z6J8 389 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 C20orf196Q8IYI0 205 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 CLEC18CQ8NCF0 446 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 OR52N4Q8NGI2 321 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 NKX6-2Q9C056 277 aaPredicted RBP11.85□□□□□ -0.51
SCN8A-202ENST00000355133 TMEM30CPA0ZSE6 113 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 COX5AP20674 150 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 CA6P23280 308 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 NKX2-2O95096 273 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 NTF3P20783 257 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 PPP1CAP62136 330 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 EIF3IQ13347 325 aaKnown RBP11.85□□□□□ -0.51
SCN8A-202ENST00000355133 RAB35Q15286 201 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 RXFP4Q8TDU9 374 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 C20orf141Q9NUB4 165 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms