RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 HLA-DOBP13765 273 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 HLA-GP17693 338 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 CD96P40200 585 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 CASRP41180 1078 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 GPR85P60893 370 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 NHLH1Q02575 133 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 OPN5Q6U736 354 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 UNQ6126/PRO20091Q6UXV3 157 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 LYG2Q86SG7 212 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 OR1S2Q8NGQ3 325 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 AQP3Q92482 292 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 TXNIPQ9H3M7 391 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 G6PC2Q9NQR9 355 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 SLC2A8Q9NY64 477 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 PLA2G3Q9NZ20 509 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 ZNF107Q9UII5 783 aaPredicted RBP7.59□□□□□ -1.19
TRIM55-204ENST00000353317 PURGQ9UJV8 347 aaKnown RBP7.59□□□□□ -1.19
TRIM55-204ENST00000353317 HHLA2Q9UM44 414 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 RPH3AQ9Y2J0 694 aaPredicted RBP7.59□□□□□ -1.19
TRIM55-204ENST00000353317 COA3Q9Y2R0 106 aaPredicted RBP7.59□□□□□ -1.19
TRIM55-204ENST00000353317 TNRC6AQ8NDV7 1962 aaKnown RBP7.59□□□□□ -1.19
TRIM55-204ENST00000353317 A0A0A6YYH2 397 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 LOC107986453A0A1B0GWG9 222 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 LOC390937A0A1W2PQ73 354 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 C9orf170A2RU37 121 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 A6NJ64 397 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 DISC1C4P0D8 188 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 F5H0A9 414 aaPredicted RBP7.59□□□□□ -1.19
TRIM55-204ENST00000353317 SULT2B1O00204 365 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 GPR31O00270 319 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 ATG12O94817 140 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 CD63P08962 238 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 SPINK2P20155 84 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 BDKRB2P30411 391 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 IL13RA1P78552 427 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 ZNF260Q3ZCT1 412 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 RNASE10Q5GAN6 216 aaKnown RBP7.59□□□□□ -1.19
TRIM55-204ENST00000353317 C1orf100Q5SVJ3 147 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 C1orf140Q5VVS0 124 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 FJX1Q86VR8 437 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 MISPQ8IVT2 679 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 LINC00518Q8N0U6 118 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 PAQR4Q8N4S7 273 aaPredicted RBP7.59□□□□□ -1.19
TRIM55-204ENST00000353317 MITD1Q8WV92 249 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 PRRT1Q99946 306 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 PIGMQ9H3S5 423 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 HPF1Q9NWY4 346 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 GDF2Q9UK05 429 aaPredicted RBP7.59□□□□□ -1.19
TRIM55-204ENST00000353317 R4GMQ9 66 aa7.59□□□□□ -1.19
TRIM55-204ENST00000353317 ZZEF1O43149 2961 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 MEGF11A6BM72 1044 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 A8MVM7 634 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 ZNF814B7Z6K7 855 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 NEURL1O76050 574 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 DXOO77932 396 aaKnown RBP7.58□□□□□ -1.2
TRIM55-204ENST00000353317 MT-ATP6P00846 226 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 IL2RAP01589 272 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 ADCYAP1P18509 176 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 PRKXP51817 358 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 GLO1Q04760 184 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 MEF2DQ14814 521 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 TMEM88Q6PEY1 159 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 TRAPPC6BQ86SZ2 158 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 LINC00346Q8IVM7 164 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 ADAD2Q8NCV1 583 aaKnown RBP7.58□□□□□ -1.2
TRIM55-204ENST00000353317 NUDCD2Q8WVJ2 157 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 WNT2BQ93097 391 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 FAM46BQ96A09 425 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 PTX4Q96A99 478 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 JSRP1Q96MG2 331 aaPredicted RBP7.58□□□□□ -1.2
TRIM55-204ENST00000353317 CNTD2Q9H8S5 307 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 FN3KRPQ9HA64 309 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 MBD2Q9UBB5 411 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 CYB5R1Q9UHQ9 305 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 A0A1W2PNR3 127 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 TMEM218A2RU14 115 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 PCP4L1A6NKN8 68 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 OR2AT4A6NND4 320 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 MS4A18H0YCH9 400 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 PLPP3O14495 311 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 TP53I11O14683 189 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 EFSO43281 561 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 RAMP1O60894 148 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 ISG15P05161 165 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 ERCC1P07992 297 aaPredicted RBP7.58□□□□□ -1.2
TRIM55-204ENST00000353317 HRH1P35367 487 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 FMODQ06828 376 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 UNC119Q13432 240 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 MS4A18Q3C1V0 323 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 SLC25A53Q5H9E4 307 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 LINC00696Q6ZRV3 163 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 DCXRQ7Z4W1 244 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 RTN4RL2Q86UN3 420 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 PUSL1Q8N0Z8 303 aaKnown RBP7.58□□□□□ -1.2
TRIM55-204ENST00000353317 OR5AP2Q8NGF4 316 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 CASTOR1Q8WTX7 329 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 ST8SIA1Q92185 356 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 C5orf34Q96MH7 638 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 PHB2Q99623 299 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 ADAT1Q9BUB4 502 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms