RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 S100A9P06702 114 aaKnown RBP12.18□□□□□ -0.46
SMC6-201ENST00000351948 ATF4P18848 351 aaPredicted RBP12.18□□□□□ -0.46
SMC6-201ENST00000351948 C9orf152Q5JTZ5 239 aa12.18□□□□□ -0.46
SMC6-201ENST00000351948 C22orf15Q8WYQ4 148 aa12.18□□□□□ -0.46
SMC6-201ENST00000351948 GCM1Q9NP62 436 aa12.18□□□□□ -0.46
SMC6-201ENST00000351948 KIF25Q9UIL4 384 aa12.18□□□□□ -0.46
SMC6-201ENST00000351948 PIGBOS1A0A0B4J2F0 54 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 CLDN1O95832 211 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 HRH1P35367 487 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 MSMO1Q15800 293 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 DRAM2Q6UX65 266 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 PDZD9Q8IXQ8 264 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 GABRG1Q8N1C3 465 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 OR10AC1Q8NH08 325 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 TAS2R5Q9NYW4 299 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 FABP7O15540 132 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 CLINT1Q14677 625 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 OR52W1Q6IF63 320 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 ZNF574Q6ZN55 896 aaPredicted RBP12.17□□□□□ -0.46
SMC6-201ENST00000351948 PRSS35Q8N3Z0 413 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 FAM181AQ8N9Y4 354 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 FBXW5Q969U6 566 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 C12orf10Q9HB07 376 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 SPACA1Q9HBV2 294 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 CACNA1BQ00975 2339 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 A0A0B4J2A0 478 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 ZNF205O95201 554 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 IFNA2P01563 188 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 SMIM10L1P0DMW3 83 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 PLPPR5Q32ZL2 321 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 OSR2Q8N2R0 312 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 TMEM251Q8N6I4 163 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 SMIM10Q96HG1 83 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 TECTBQ96PL2 329 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 ZFP57Q9NU63 452 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 C1orf123Q9NWV4 160 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 QPCTLQ9NXS2 382 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 SHPKQ9UHJ6 478 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 LOC101059948A0A1B0GTJ6 334 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 MFGE8Q08431 387 aaPredicted RBP12.17□□□□□ -0.46
SMC6-201ENST00000351948 ZNF391Q9UJN7 358 aa12.17□□□□□ -0.46
SMC6-201ENST00000351948 KIR2DS1A0A191URI9 304 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 IFNA10P01566 189 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 BGLAPP02818 100 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 ANKRD34CP0C6C1 535 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 CD82P27701 267 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 KIR2DS4P43632 304 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 ZNF85Q03923 595 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 KIR2DS1Q14954 304 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 KISS1Q15726 138 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 BAK1Q16611 211 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 DPPA2Q7Z7J5 298 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 CCL17Q92583 94 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 EXTL1Q92935 676 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 TRAPPC4Q9Y296 219 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 hCG_1809904A0A1W2PP81 198 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 A0A1W2PPE2 198 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 A0A1W2PR64 198 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 A0A1W2PRV1 198 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 AQP7P3A6NL99 342 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 C3orf80F5H4A9 247 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 CPEB3Q8NE35 698 aaKnown RBP12.16□□□□□ -0.46
SMC6-201ENST00000351948 ZNF169Q14929 603 aaPredicted RBP12.16□□□□□ -0.46
SMC6-201ENST00000351948 OR52N4Q8NGI2 321 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 OR4A16Q8NH70 328 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 S100PBPQ96BU1 408 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 ZNF486Q96H40 463 aaPredicted RBP12.16□□□□□ -0.46
SMC6-201ENST00000351948 ICAM5Q9UMF0 924 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 UGT2A1Q9Y4X1 527 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 MDC1Q14676 2089 aaKnown RBP12.16□□□□□ -0.46
SMC6-201ENST00000351948 RNF212BA8MTL3 300 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 TSPAN2O60636 221 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 TSPAN15O95858 294 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 IGLV3-19P01714 112 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 EIF2S3P41091 472 aaKnown RBP12.16□□□□□ -0.46
SMC6-201ENST00000351948 CRYBB2P43320 205 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 HOXA1P49639 335 aaPredicted RBP12.16□□□□□ -0.46
SMC6-201ENST00000351948 RFESDQ8TAC1 157 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 A3GALT2U3KPV4 340 aa12.16□□□□□ -0.46
SMC6-201ENST00000351948 SPTBN1Q01082 2364 aaKnown RBP12.15□□□□□ -0.46
SMC6-201ENST00000351948 SHOXO15266 292 aa12.15□□□□□ -0.46
SMC6-201ENST00000351948 FCGR2CP31995 323 aa12.15□□□□□ -0.46
SMC6-201ENST00000351948 FUT6P51993 359 aa12.15□□□□□ -0.46
SMC6-201ENST00000351948 TSNAXQ99598 290 aaKnown RBP12.15□□□□□ -0.46
SMC6-201ENST00000351948 PRSS27Q9BQR3 290 aa12.15□□□□□ -0.46
SMC6-201ENST00000351948 DDA1Q9BW61 102 aa12.15□□□□□ -0.46
SMC6-201ENST00000351948 ZNF230Q9UIE0 474 aaPredicted RBP12.15□□□□□ -0.46
SMC6-201ENST00000351948 PRELID3BQ9Y3B1 194 aa12.15□□□□□ -0.46
SMC6-201ENST00000351948 TRIM64CA6NLI5 447 aa12.15□□□□□ -0.46
SMC6-201ENST00000351948 K7EPK0 472 aa12.15□□□□□ -0.46
SMC6-201ENST00000351948 SLC17A2O00624 439 aa12.15□□□□□ -0.46
SMC6-201ENST00000351948 RRAS2P62070 204 aaPredicted RBP12.15□□□□□ -0.46
SMC6-201ENST00000351948 NKX6-1P78426 367 aaPredicted RBP12.15□□□□□ -0.46
SMC6-201ENST00000351948 RAB31Q13636 194 aa12.15□□□□□ -0.46
SMC6-201ENST00000351948 BTLAQ7Z6A9 289 aa12.15□□□□□ -0.46
SMC6-201ENST00000351948 FAM71E2Q8N5Q1 922 aa12.15□□□□□ -0.46
SMC6-201ENST00000351948 OR10R2Q8NGX6 335 aa12.15□□□□□ -0.46
SMC6-201ENST00000351948 PP6455Q8WZ26 134 aa12.15□□□□□ -0.46
SMC6-201ENST00000351948 IGHV3-13P01766 116 aa12.15□□□□□ -0.46
SMC6-201ENST00000351948 IGHV3-7P01780 117 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms