RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 GHRLQ9UBU3 117 aa14.35□□□□□ -0.11
PTPN11-201ENST00000351677 ZNF230Q9UIE0 474 aaPredicted RBP14.35□□□□□ -0.11
PTPN11-201ENST00000351677 U3KQ87 197 aa14.35□□□□□ -0.11
PTPN11-201ENST00000351677 hCG_1809904A0A1W2PP81 198 aa14.35□□□□□ -0.11
PTPN11-201ENST00000351677 A0A1W2PPE2 198 aa14.35□□□□□ -0.11
PTPN11-201ENST00000351677 A0A1W2PR64 198 aa14.35□□□□□ -0.11
PTPN11-201ENST00000351677 A0A1W2PRV1 198 aa14.35□□□□□ -0.11
PTPN11-201ENST00000351677 H3BMH7 237 aa14.35□□□□□ -0.11
PTPN11-201ENST00000351677 ARPC3O15145 178 aa14.35□□□□□ -0.11
PTPN11-201ENST00000351677 HOXC4P09017 264 aaPredicted RBP14.35□□□□□ -0.11
PTPN11-201ENST00000351677 CHRNB4P30926 498 aa14.35□□□□□ -0.11
PTPN11-201ENST00000351677 TMEM41BQ5BJD5 291 aa14.35□□□□□ -0.11
PTPN11-201ENST00000351677 THNSL2Q86YJ6 484 aa14.35□□□□□ -0.11
PTPN11-201ENST00000351677 GALNT16Q8N428 558 aa14.35□□□□□ -0.11
PTPN11-201ENST00000351677 OR1F12Q8NHA8 337 aa14.35□□□□□ -0.11
PTPN11-201ENST00000351677 GABRG3Q99928 467 aa14.35□□□□□ -0.11
PTPN11-201ENST00000351677 NPBWR1P48145 328 aa14.35□□□□□ -0.11
PTPN11-201ENST00000351677 GABRA4P48169 554 aa14.35□□□□□ -0.11
PTPN11-201ENST00000351677 ALKBH6Q3KRA9 238 aa14.35□□□□□ -0.11
PTPN11-201ENST00000351677 KIAA1958Q8N8K9 716 aa14.35□□□□□ -0.11
PTPN11-201ENST00000351677 EGLN1Q9GZT9 426 aa14.35□□□□□ -0.11
PTPN11-201ENST00000351677 TMEM11P17152 192 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 EDEM2Q9BV94 578 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 TPPP3Q9BW30 176 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 OR2C1O95371 312 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 EML2O95834 649 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 FUT6P51993 359 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 CD300CQ08708 224 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 ZNF141Q15928 474 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 SARAFQ96BY9 339 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 MTCH1Q9NZJ7 389 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 ATP23Q9Y6H3 246 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 APOA2P02652 100 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 MT-ND4LP03901 98 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 RPUSD3Q6P087 351 aaKnown RBP14.34□□□□□ -0.11
PTPN11-201ENST00000351677 C15orf54Q8N8G6 183 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 KCNIP2Q9NS61 270 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 NDUFB6O95139 128 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 CT45A6P0DMU7 189 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 CT45A5P0DMU8 189 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 CT45A7P0DMV0 189 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 CT45A8P0DMV1 189 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 CT45A9P0DMV2 189 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 HABP2Q14520 560 aaPredicted RBP14.34□□□□□ -0.11
PTPN11-201ENST00000351677 CT45A2Q5DJT8 189 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 CT45A1Q5HYN5 189 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 TMPRSS7Q7RTY8 843 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 C20orf196Q8IYI0 205 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 CT45A3Q8NHU0 189 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 PLEKHA2Q9HB19 425 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 PMS2P1A4D2B8 440 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 ZNF891A8MT65 544 aaPredicted RBP14.34□□□□□ -0.11
PTPN11-201ENST00000351677 ALG1L2C9J202 215 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 EPPINO95925 133 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 GALP22466 123 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 PNLIPRP3Q17RR3 467 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 BAGE3Q86Y29 109 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 BAGE2Q86Y30 109 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 ZBTB44Q8NCP5 570 aa14.34□□□□□ -0.11
PTPN11-201ENST00000351677 RRP8O43159 456 aaKnown RBP14.33□□□□□ -0.11
PTPN11-201ENST00000351677 CRYAAP02489 173 aa14.33□□□□□ -0.11
PTPN11-201ENST00000351677 C1QCP02747 245 aa14.33□□□□□ -0.11
PTPN11-201ENST00000351677 KIAA0141Q14154 515 aaPredicted RBP14.33□□□□□ -0.11
PTPN11-201ENST00000351677 TMEM128Q5BJH2 165 aa14.33□□□□□ -0.11
PTPN11-201ENST00000351677 FBXL14Q8N1E6 418 aa14.33□□□□□ -0.11
PTPN11-201ENST00000351677 PP6455Q8WZ26 134 aa14.33□□□□□ -0.11
PTPN11-201ENST00000351677 ARHGAP5-AS1Q96IT6 56 aa14.33□□□□□ -0.11
PTPN11-201ENST00000351677 SERPINE3A8MV23 424 aa14.33□□□□□ -0.12
PTPN11-201ENST00000351677 BCL2L11O43521 198 aa14.33□□□□□ -0.12
PTPN11-201ENST00000351677 TMEM127O75204 238 aa14.33□□□□□ -0.12
PTPN11-201ENST00000351677 CNIH1O95406 144 aa14.33□□□□□ -0.12
PTPN11-201ENST00000351677 NAA40Q86UY6 237 aa14.33□□□□□ -0.12
PTPN11-201ENST00000351677 GNPNAT1Q96EK6 184 aaPredicted RBP14.33□□□□□ -0.12
PTPN11-201ENST00000351677 BOD1Q96IK1 185 aa14.33□□□□□ -0.12
PTPN11-201ENST00000351677 AANATQ16613 207 aa14.33□□□□□ -0.12
PTPN11-201ENST00000351677 SP6Q3SY56 376 aa14.33□□□□□ -0.12
PTPN11-201ENST00000351677 ZBTB37Q5TC79 503 aa14.33□□□□□ -0.12
PTPN11-201ENST00000351677 IL5P05113 134 aa14.33□□□□□ -0.12
PTPN11-201ENST00000351677 CTLA4P16410 223 aa14.33□□□□□ -0.12
PTPN11-201ENST00000351677 LGALS4P56470 323 aa14.33□□□□□ -0.12
PTPN11-201ENST00000351677 RPS23P62266 143 aaKnown RBP14.33□□□□□ -0.12
PTPN11-201ENST00000351677 LIN7CQ9NUP9 197 aaKnown RBP14.33□□□□□ -0.12
PTPN11-201ENST00000351677 PRRG2O14669 202 aa14.33□□□□□ -0.12
PTPN11-201ENST00000351677 SSTP61278 116 aa14.33□□□□□ -0.12
PTPN11-201ENST00000351677 FZD5Q13467 585 aa14.33□□□□□ -0.12
PTPN11-201ENST00000351677 OR1C1Q15619 314 aa14.33□□□□□ -0.12
PTPN11-201ENST00000351677 PDZD11Q5EBL8 140 aa14.33□□□□□ -0.12
PTPN11-201ENST00000351677 WFDC8Q8IUA0 241 aa14.33□□□□□ -0.12
PTPN11-201ENST00000351677 OR52N4Q8NGI2 321 aa14.33□□□□□ -0.12
PTPN11-201ENST00000351677 MCHR2Q969V1 340 aa14.33□□□□□ -0.12
PTPN11-201ENST00000351677 RCL1Q9Y2P8 373 aaKnown RBP14.33□□□□□ -0.12
PTPN11-201ENST00000351677 POLR2AP24928 1970 aaKnown RBP14.32□□□□□ -0.12
PTPN11-201ENST00000351677 CTAG2O75638 210 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 GNB1P62873 340 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 ETFDHQ16134 617 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 OR2I1PQ8NGU4 316 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 CMTM3Q96MX0 182 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 TMEM9BQ9NQ34 198 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 A0A1W2PPV9 198 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 KISS1Q15726 138 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms