RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 TNRC18O15417 2968 aaPredicted RBP19.45■□□□□ 0.7
UPF3A-201ENST00000351487 DBX1A6NMT0 343 aa19.45■□□□□ 0.7
UPF3A-201ENST00000351487 A8MXK9 166 aa19.45■□□□□ 0.7
UPF3A-201ENST00000351487 DHHO43323 396 aa19.45■□□□□ 0.7
UPF3A-201ENST00000351487 CRTAPO75718 401 aaPredicted RBP19.45■□□□□ 0.7
UPF3A-201ENST00000351487 RAD51DO75771 328 aa19.45■□□□□ 0.7
UPF3A-201ENST00000351487 DHRS3O75911 302 aa19.45■□□□□ 0.7
UPF3A-201ENST00000351487 WDPCPO95876 746 aa19.45■□□□□ 0.7
UPF3A-201ENST00000351487 DUSP3P51452 185 aaPredicted RBP19.45■□□□□ 0.7
UPF3A-201ENST00000351487 MLF1P58340 268 aa19.45■□□□□ 0.7
UPF3A-201ENST00000351487 OVCH2Q7RTZ1 564 aa19.45■□□□□ 0.7
UPF3A-201ENST00000351487 RPS19BP1Q86WX3 136 aaKnown RBP19.45■□□□□ 0.7
UPF3A-201ENST00000351487 TERB2Q8NHR7 220 aa19.45■□□□□ 0.7
UPF3A-201ENST00000351487 IGHV3-15A0A0B4J1V0 119 aa19.44■□□□□ 0.7
UPF3A-201ENST00000351487 RNF222A6NCQ9 220 aa19.44■□□□□ 0.7
UPF3A-201ENST00000351487 NAT2P11245 290 aa19.44■□□□□ 0.7
UPF3A-201ENST00000351487 VAMP1P23763 118 aa19.44■□□□□ 0.7
UPF3A-201ENST00000351487 CBX5P45973 191 aa19.44■□□□□ 0.7
UPF3A-201ENST00000351487 RAC1P63000 192 aa19.44■□□□□ 0.7
UPF3A-201ENST00000351487 KISS1Q15726 138 aa19.44■□□□□ 0.7
UPF3A-201ENST00000351487 MARCH1Q8TCQ1 289 aa19.44■□□□□ 0.7
UPF3A-201ENST00000351487 INTS12Q96CB8 462 aaKnown RBP19.44■□□□□ 0.7
UPF3A-201ENST00000351487 ARHGAP5-AS1Q96IT6 56 aa19.44■□□□□ 0.7
UPF3A-201ENST00000351487 DMRTA2Q96SC8 542 aa19.44■□□□□ 0.7
UPF3A-201ENST00000351487 OR10A2Q9H208 303 aa19.44■□□□□ 0.7
UPF3A-201ENST00000351487 SLC25A32Q9H2D1 315 aa19.44■□□□□ 0.7
UPF3A-201ENST00000351487 FOXI3A8MTJ6 420 aaPredicted RBP19.44■□□□□ 0.7
UPF3A-201ENST00000351487 HSD17B13Q7Z5P4 300 aaPredicted RBP19.44■□□□□ 0.7
UPF3A-201ENST00000351487 EIF4E3Q8N5X7 224 aaKnown RBP19.44■□□□□ 0.7
UPF3A-201ENST00000351487 TMEM156Q8N614 296 aa19.44■□□□□ 0.7
UPF3A-201ENST00000351487 CCDC54Q8NEL0 328 aa19.44■□□□□ 0.7
UPF3A-201ENST00000351487 PP6455Q8WZ26 134 aa19.44■□□□□ 0.7
UPF3A-201ENST00000351487 SEC22AQ96IW7 307 aa19.44■□□□□ 0.7
UPF3A-201ENST00000351487 HPF1Q9NWY4 346 aa19.44■□□□□ 0.7
UPF3A-201ENST00000351487 FLVCR1Q9Y5Y0 555 aa19.44■□□□□ 0.7
UPF3A-201ENST00000351487 WDR87Q6ZQQ6 2873 aa19.44■□□□□ 0.7
UPF3A-201ENST00000351487 NSG1A0A0A6YYJ2 146 aa19.43■□□□□ 0.7
UPF3A-201ENST00000351487 KANTRA0A1W2PQU2 76 aa19.43■□□□□ 0.7
UPF3A-201ENST00000351487 BCL2L11O43521 198 aa19.43■□□□□ 0.7
UPF3A-201ENST00000351487 FGF2P09038 288 aa19.43■□□□□ 0.7
UPF3A-201ENST00000351487 AKR1C4P17516 323 aa19.43■□□□□ 0.7
UPF3A-201ENST00000351487 AVPR2P30518 371 aa19.43■□□□□ 0.7
UPF3A-201ENST00000351487 HOXD11P31277 338 aaPredicted RBP19.43■□□□□ 0.7
UPF3A-201ENST00000351487 PTGFRP43088 359 aa19.43■□□□□ 0.7
UPF3A-201ENST00000351487 ATP1B3P54709 279 aa19.43■□□□□ 0.7
UPF3A-201ENST00000351487 RSPO1Q2MKA7 263 aaPredicted RBP19.43■□□□□ 0.7
UPF3A-201ENST00000351487 C10orf35Q96D05 121 aa19.43■□□□□ 0.7
UPF3A-201ENST00000351487 LIN37Q96GY3 246 aaPredicted RBP19.43■□□□□ 0.7
UPF3A-201ENST00000351487 LINC00052Q96N35 136 aa19.43■□□□□ 0.7
UPF3A-201ENST00000351487 CHST5Q9GZS9 411 aa19.43■□□□□ 0.7
UPF3A-201ENST00000351487 OR5H15A6NDH6 313 aa19.43■□□□□ 0.7
UPF3A-201ENST00000351487 F5H5K5 113 aa19.43■□□□□ 0.7
UPF3A-201ENST00000351487 CBR3O75828 277 aa19.43■□□□□ 0.7
UPF3A-201ENST00000351487 SLC6A9P48067 706 aa19.43■□□□□ 0.7
UPF3A-201ENST00000351487 LRRC37A5PQ49AS3 106 aa19.43■□□□□ 0.7
UPF3A-201ENST00000351487 ACOT7LQ6ZUV0 252 aa19.43■□□□□ 0.7
UPF3A-201ENST00000351487 MAML2Q8IZL2 1156 aaPredicted RBP19.43■□□□□ 0.7
UPF3A-201ENST00000351487 ZIC4Q8N9L1 334 aa19.43■□□□□ 0.7
UPF3A-201ENST00000351487 CASTOR1Q8WTX7 329 aa19.43■□□□□ 0.7
UPF3A-201ENST00000351487 RYDENQ9NUL5 291 aaKnown RBP19.43■□□□□ 0.7
UPF3A-201ENST00000351487 GPR132Q9UNW8 380 aa19.43■□□□□ 0.7
UPF3A-201ENST00000351487 A0A0J9YW62 118 aa19.42■□□□□ 0.7
UPF3A-201ENST00000351487 KRBOX1C9JBD0 128 aa19.42■□□□□ 0.7
UPF3A-201ENST00000351487 G3V3Y1 287 aa19.42■□□□□ 0.7
UPF3A-201ENST00000351487 DNPH1O43598 174 aa19.42■□□□□ 0.7
UPF3A-201ENST00000351487 HPP00738 406 aa19.42■□□□□ 0.7
UPF3A-201ENST00000351487 APOC1P02654 83 aa19.42■□□□□ 0.7
UPF3A-201ENST00000351487 TMEM128Q5BJH2 165 aa19.42■□□□□ 0.7
UPF3A-201ENST00000351487 SLC16A14Q7RTX9 510 aa19.42■□□□□ 0.7
UPF3A-201ENST00000351487 JSRP1Q96MG2 331 aaPredicted RBP19.42■□□□□ 0.7
UPF3A-201ENST00000351487 VRK1Q99986 396 aaPredicted RBP19.42■□□□□ 0.7
UPF3A-201ENST00000351487 PIGQQ9BRB3 760 aa19.42■□□□□ 0.7
UPF3A-201ENST00000351487 WDR13Q9H1Z4 485 aa19.42■□□□□ 0.7
UPF3A-201ENST00000351487 MYO7BQ6PIF6 2116 aa19.42■□□□□ 0.7
UPF3A-201ENST00000351487 DLSTP36957 453 aa19.41■□□□□ 0.7
UPF3A-201ENST00000351487 NUP62P37198 522 aaPredicted RBP19.41■□□□□ 0.7
UPF3A-201ENST00000351487 FOLR3P41439 243 aa19.41■□□□□ 0.7
UPF3A-201ENST00000351487 C20orf196Q8IYI0 205 aa19.41■□□□□ 0.7
UPF3A-201ENST00000351487 LRRC18Q8N456 261 aa19.41■□□□□ 0.7
UPF3A-201ENST00000351487 TMEM185AQ8NFB2 350 aa19.41■□□□□ 0.7
UPF3A-201ENST00000351487 SF3B5Q9BWJ5 86 aaKnown RBP19.41■□□□□ 0.7
UPF3A-201ENST00000351487 RBM24Q9BX46 236 aaKnown RBP19.41■□□□□ 0.7
UPF3A-201ENST00000351487 ULBP2Q9BZM5 246 aa19.41■□□□□ 0.7
UPF3A-201ENST00000351487 RASL12Q9NYN1 266 aa19.41■□□□□ 0.7
UPF3A-201ENST00000351487 GJE1A6NN92 205 aa19.41■□□□□ 0.7
UPF3A-201ENST00000351487 PATE3B3GLJ2 98 aa19.41■□□□□ 0.7
UPF3A-201ENST00000351487 M0R135 149 aa19.41■□□□□ 0.7
UPF3A-201ENST00000351487 TNFSF11O14788 317 aa19.41■□□□□ 0.7
UPF3A-201ENST00000351487 CER1O95813 267 aa19.41■□□□□ 0.7
UPF3A-201ENST00000351487 ZNF84P51523 738 aa19.41■□□□□ 0.7
UPF3A-201ENST00000351487 MRPS34P82930 218 aaKnown RBP19.41■□□□□ 0.7
UPF3A-201ENST00000351487 UBE2V2Q15819 145 aa19.41■□□□□ 0.7
UPF3A-201ENST00000351487 C1QL2Q7Z5L3 287 aa19.41■□□□□ 0.7
UPF3A-201ENST00000351487 PEG10Q86TG7 708 aaKnown RBP19.41■□□□□ 0.7
UPF3A-201ENST00000351487 DTX1Q86Y01 620 aa19.41■□□□□ 0.7
UPF3A-201ENST00000351487 BVESQ8NE79 360 aa19.41■□□□□ 0.7
UPF3A-201ENST00000351487 ZNF799Q96GE5 643 aa19.41■□□□□ 0.7
UPF3A-201ENST00000351487 TM2D1Q9BX74 207 aa19.41■□□□□ 0.7
UPF3A-201ENST00000351487 C5orf66Q9H5L9 145 aa19.41■□□□□ 0.7
UPF3A-201ENST00000351487 FAM27BQ5VT28 67 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms