RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 SLC35G5Q96KT7 338 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 C20orf85Q9H1P6 137 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 OR51I1Q9H343 314 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 IKZF5Q9H5V7 419 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 PLEKHA1Q9HB21 404 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 TRDCB7Z8K6 153 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 M0R129 80 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 KDELR3O43731 214 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 HBZP02008 142 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 CD2P06729 351 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 ZNF250P15622 560 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 PSMB1P20618 241 aaKnown RBP5.3□□□□□ -1.56
RFC1-201ENST00000349703 COX7A1P24310 79 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 CERS1P27544 350 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 FCGR2BP31994 310 aaPredicted RBP5.3□□□□□ -1.56
RFC1-201ENST00000349703 FCGR2CP31995 323 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 CEACAM3P40198 252 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 CEACAM6P40199 344 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 RAB13P51153 203 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 ARFIP1P53367 373 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 SMAGPQ0VAQ4 97 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 MRPL23Q16540 153 aaKnown RBP5.3□□□□□ -1.56
RFC1-201ENST00000349703 MS4A18Q3C1V0 323 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 FBXL22Q6P050 247 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 TMUB2Q71RG4 321 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 DTX2Q86UW9 622 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 AMZ2Q86W34 360 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 ANKRD29Q8N6D5 301 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 TMEM252Q8N6L7 170 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 TP53I13Q8NBR0 393 aaPredicted RBP5.3□□□□□ -1.56
RFC1-201ENST00000349703 HGDQ93099 445 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 ZNF471Q9BX82 626 aaPredicted RBP5.3□□□□□ -1.56
RFC1-201ENST00000349703 BARHL1Q9BZE3 327 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 TBL1XR1Q9BZK7 514 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 SLC19A3Q9BZV2 496 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 R3HDMLQ9H3Y0 253 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 TMEM38AQ9H6F2 299 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 SCML2Q9UQR0 700 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 ZNFX1Q9P2E3 1918 aaKnown RBP5.3□□□□□ -1.56
RFC1-201ENST00000349703 A0A0X1KG70 313 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 A0A1W2PQF6 199 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 GPR171O14626 319 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 OR1F1O43749 312 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 GUSBP08236 651 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 SMIM10L2AP0DMW4 78 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 SMIM10L2BP0DMW5 78 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 LAMP1P11279 417 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 XCR1P46094 333 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 SUB1P53999 127 aaKnown RBP eCLIP5.3□□□□□ -1.56
RFC1-201ENST00000349703 KIAA0141Q14154 515 aaPredicted RBP5.3□□□□□ -1.56
RFC1-201ENST00000349703 MICBQ29980 383 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 LEXMQ3ZCV2 418 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 EOGTQ5NDL2 527 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 CTSL3PQ5NE16 218 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 INO80CQ6PI98 192 aaPredicted RBP5.3□□□□□ -1.56
RFC1-201ENST00000349703 FAM122BQ7Z309 247 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 CMTM8Q8IZV2 173 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 STPG2Q8N412 459 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 ACBD7Q8N6N7 88 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 WDSUB1Q8N9V3 476 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 OR8D4Q8NGM9 314 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 OR1J4Q8NGS1 313 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 OR2L2Q8NH16 312 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 GMPPAQ96IJ6 420 aaPredicted RBP5.3□□□□□ -1.56
RFC1-201ENST00000349703 ATF6BQ99941 703 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 RGPD3A6NKT7 1758 aaPredicted RBP5.3□□□□□ -1.56
RFC1-201ENST00000349703 RGPD4Q7Z3J3 1758 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 IGLV5-39A0A0G2JS06 123 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 A0A1B0GUH1 482 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 IGLON5A6NGN9 336 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 PLA2G10O15496 165 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 PAX4O43316 350 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 FZD7O75084 574 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 AQP8O94778 261 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 WISP3O95389 354 aaPredicted RBP5.3□□□□□ -1.56
RFC1-201ENST00000349703 S100A4P26447 101 aaKnown RBP5.3□□□□□ -1.56
RFC1-201ENST00000349703 VEGFCP49767 419 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 RAB5CP51148 216 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 UBE2MP61081 183 aaKnown RBP5.3□□□□□ -1.56
RFC1-201ENST00000349703 ERVK-16P61578 105 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 POLR2LP62875 67 aaKnown RBP5.3□□□□□ -1.56
RFC1-201ENST00000349703 MFGE8Q08431 387 aaPredicted RBP5.3□□□□□ -1.56
RFC1-201ENST00000349703 FABP9Q0Z7S8 132 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 TMEM187Q14656 261 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 PRSS8Q16651 343 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 HLA-BQ31612 363 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 NSUN5P2Q63ZY6 315 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 B3GNTL1Q67FW5 361 aaPredicted RBP5.3□□□□□ -1.56
RFC1-201ENST00000349703 RPL13AP3Q6NVV1 102 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 SMARCD3Q6STE5 483 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 ALKAL2Q6UX46 152 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 BTNL3Q6UXE8 466 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 ZNF561Q8N587 486 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 ADAD2Q8NCV1 583 aaKnown RBP5.3□□□□□ -1.56
RFC1-201ENST00000349703 OR1L3Q8NH93 324 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 PDXPQ96GD0 296 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 S1PR3Q99500 378 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 FGF21Q9NSA1 209 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 IL36RNQ9UBH0 155 aa5.3□□□□□ -1.56
RFC1-201ENST00000349703 CLEC2DQ9UHP7 191 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms