RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 ZNF679Q8IYX0 411 aa11.77□□□□□ -0.52
UBA3-201ENST00000349511 PLPP7Q8NBV4 271 aa11.77□□□□□ -0.52
UBA3-201ENST00000349511 COQ8AQ8NI60 647 aa11.77□□□□□ -0.52
UBA3-201ENST00000349511 RNF128Q8TEB7 428 aa11.77□□□□□ -0.52
UBA3-201ENST00000349511 THRSPQ92748 146 aa11.77□□□□□ -0.52
UBA3-201ENST00000349511 TMEM54Q969K7 222 aa11.77□□□□□ -0.52
UBA3-201ENST00000349511 WDYHV1Q96HA8 205 aa11.77□□□□□ -0.52
UBA3-201ENST00000349511 LINC00052Q96N35 136 aa11.77□□□□□ -0.52
UBA3-201ENST00000349511 FXYD6Q9H0Q3 95 aa11.77□□□□□ -0.52
UBA3-201ENST00000349511 CRLF2Q9HC73 371 aa11.77□□□□□ -0.52
UBA3-201ENST00000349511 ASH2LQ9UBL3 628 aa11.77□□□□□ -0.52
UBA3-201ENST00000349511 FOXD3Q9UJU5 478 aaPredicted RBP11.77□□□□□ -0.52
UBA3-201ENST00000349511 LRP12Q9Y561 859 aa11.77□□□□□ -0.52
UBA3-201ENST00000349511 RER1O15258 196 aa11.77□□□□□ -0.53
UBA3-201ENST00000349511 ACTL6AO96019 429 aa11.77□□□□□ -0.53
UBA3-201ENST00000349511 NMBP08949 121 aa11.77□□□□□ -0.53
UBA3-201ENST00000349511 GABRA1P14867 456 aa11.77□□□□□ -0.53
UBA3-201ENST00000349511 MFGE8Q08431 387 aaPredicted RBP11.77□□□□□ -0.53
UBA3-201ENST00000349511 TEX30Q5JUR7 227 aa11.77□□□□□ -0.53
UBA3-201ENST00000349511 STEAP1BQ6NZ63 245 aa11.77□□□□□ -0.53
UBA3-201ENST00000349511 CFAP77Q6ZQR2 320 aa11.77□□□□□ -0.53
UBA3-201ENST00000349511 OR5M9Q8NGP3 310 aa11.77□□□□□ -0.53
UBA3-201ENST00000349511 OR52N5Q8NH56 324 aa11.77□□□□□ -0.53
UBA3-201ENST00000349511 ST7LQ8TDW4 575 aa11.77□□□□□ -0.53
UBA3-201ENST00000349511 GPX8Q8TED1 209 aa11.77□□□□□ -0.53
UBA3-201ENST00000349511 SCARB1Q8WTV0 552 aa11.77□□□□□ -0.53
UBA3-201ENST00000349511 ASB17Q8WXJ9 295 aa11.77□□□□□ -0.53
UBA3-201ENST00000349511 SLC25A28Q96A46 364 aa11.77□□□□□ -0.53
UBA3-201ENST00000349511 ABHD17AQ96GS6 310 aa11.77□□□□□ -0.53
UBA3-201ENST00000349511 ARL6Q9H0F7 186 aa11.77□□□□□ -0.53
UBA3-201ENST00000349511 TMEM138Q9NPI0 162 aa11.77□□□□□ -0.53
UBA3-201ENST00000349511 SLC17A5Q9NRA2 495 aa11.77□□□□□ -0.53
UBA3-201ENST00000349511 CYB5R1Q9UHQ9 305 aa11.77□□□□□ -0.53
UBA3-201ENST00000349511 MCTS1Q9ULC4 181 aaKnown RBP11.77□□□□□ -0.53
UBA3-201ENST00000349511 DHDHQ9UQ10 334 aa11.77□□□□□ -0.53
UBA3-201ENST00000349511 LHFPL6Q9Y693 200 aa11.77□□□□□ -0.53
UBA3-201ENST00000349511 POM121CA8CG34 1229 aa11.76□□□□□ -0.53
UBA3-201ENST00000349511 DHHO43323 396 aa11.76□□□□□ -0.53
UBA3-201ENST00000349511 ZP3P21754 424 aa11.76□□□□□ -0.53
UBA3-201ENST00000349511 PRKACBP22694 351 aa11.76□□□□□ -0.53
UBA3-201ENST00000349511 PXDC1Q5TGL8 231 aa11.76□□□□□ -0.53
UBA3-201ENST00000349511 C9orf135Q5VTT2 229 aa11.76□□□□□ -0.53
UBA3-201ENST00000349511 KCTD18Q6PI47 426 aaPredicted RBP11.76□□□□□ -0.53
UBA3-201ENST00000349511 C20orf196Q8IYI0 205 aa11.76□□□□□ -0.53
UBA3-201ENST00000349511 TNFAIP8L1Q8WVP5 186 aa11.76□□□□□ -0.53
UBA3-201ENST00000349511 MED9Q9NWA0 146 aa11.76□□□□□ -0.53
UBA3-201ENST00000349511 RAXQ9Y2V3 346 aa11.76□□□□□ -0.53
UBA3-201ENST00000349511 NOSIPQ9Y314 301 aaKnown RBP11.76□□□□□ -0.53
UBA3-201ENST00000349511 TTLL8A6PVC2 850 aa11.75□□□□□ -0.53
UBA3-201ENST00000349511 CALCRP30988 508 aa11.75□□□□□ -0.53
UBA3-201ENST00000349511 BAMBIQ13145 260 aa11.75□□□□□ -0.53
UBA3-201ENST00000349511 C4orf46Q504U0 113 aa11.75□□□□□ -0.53
UBA3-201ENST00000349511 GSG1LQ6UXU4 331 aa11.75□□□□□ -0.53
UBA3-201ENST00000349511 MED12LQ86YW9 2145 aa11.75□□□□□ -0.53
UBA3-201ENST00000349511 GABRG1Q8N1C3 465 aa11.75□□□□□ -0.53
UBA3-201ENST00000349511 RBMXL3Q8N7X1 1067 aaKnown RBP11.75□□□□□ -0.53
UBA3-201ENST00000349511 OR10S1Q8NGN2 331 aa11.75□□□□□ -0.53
UBA3-201ENST00000349511 ASB5Q8WWX0 329 aa11.75□□□□□ -0.53
UBA3-201ENST00000349511 SLAMF6Q96DU3 332 aa11.75□□□□□ -0.53
UBA3-201ENST00000349511 GAL3ST1Q99999 423 aa11.75□□□□□ -0.53
UBA3-201ENST00000349511 ZNF416Q9BWM5 594 aa11.75□□□□□ -0.53
UBA3-201ENST00000349511 ZNF71Q9NQZ8 489 aaPredicted RBP11.75□□□□□ -0.53
UBA3-201ENST00000349511 TAS2R4Q9NYW5 299 aa11.75□□□□□ -0.53
UBA3-201ENST00000349511 GDF2Q9UK05 429 aaPredicted RBP11.75□□□□□ -0.53
UBA3-201ENST00000349511 RP1L1Q8IWN7 2480 aaPredicted RBP11.75□□□□□ -0.53
UBA3-201ENST00000349511 GTF3C1Q12789 2109 aa11.75□□□□□ -0.53
UBA3-201ENST00000349511 RRP8O43159 456 aaKnown RBP11.75□□□□□ -0.53
UBA3-201ENST00000349511 MRPL33O75394 65 aaKnown RBP11.75□□□□□ -0.53
UBA3-201ENST00000349511 LPLP06858 475 aa11.75□□□□□ -0.53
UBA3-201ENST00000349511 HOXD4P09016 255 aaPredicted RBP11.75□□□□□ -0.53
UBA3-201ENST00000349511 GUCA1AP43080 201 aaPredicted RBP11.75□□□□□ -0.53
UBA3-201ENST00000349511 RIDAP52758 137 aaKnown RBP11.75□□□□□ -0.53
UBA3-201ENST00000349511 TAGLNQ01995 201 aaKnown RBP11.75□□□□□ -0.53
UBA3-201ENST00000349511 ROM1Q03395 351 aa11.75□□□□□ -0.53
UBA3-201ENST00000349511 SSBP1Q04837 148 aaKnown RBP11.75□□□□□ -0.53
UBA3-201ENST00000349511 GK2Q14410 553 aaPredicted RBP11.75□□□□□ -0.53
UBA3-201ENST00000349511 MPPED2Q15777 294 aa11.75□□□□□ -0.53
UBA3-201ENST00000349511 PCK2Q16822 640 aa11.75□□□□□ -0.53
UBA3-201ENST00000349511 GLT8D1Q68CQ7 371 aa11.75□□□□□ -0.53
UBA3-201ENST00000349511 C11orf88Q6PI97 169 aa11.75□□□□□ -0.53
UBA3-201ENST00000349511 CATSPERDQ86XM0 798 aa11.75□□□□□ -0.53
UBA3-201ENST00000349511 POFUT1Q9H488 388 aa11.75□□□□□ -0.53
UBA3-201ENST00000349511 SSUH2Q9Y2M2 353 aa11.75□□□□□ -0.53
UBA3-201ENST00000349511 EMC9Q9Y3B6 208 aa11.75□□□□□ -0.53
UBA3-201ENST00000349511 MKRN2OSH3BPM6 223 aa11.74□□□□□ -0.53
UBA3-201ENST00000349511 H2BFMP0C1H6 154 aa11.74□□□□□ -0.53
UBA3-201ENST00000349511 HTR2CP28335 458 aa11.74□□□□□ -0.53
UBA3-201ENST00000349511 TAS2R19P59542 299 aa11.74□□□□□ -0.53
UBA3-201ENST00000349511 SORDQ00796 357 aa11.74□□□□□ -0.53
UBA3-201ENST00000349511 PLEKHN1Q494U1 663 aaPredicted RBP11.74□□□□□ -0.53
UBA3-201ENST00000349511 TSPO2Q5TGU0 170 aa11.74□□□□□ -0.53
UBA3-201ENST00000349511 IGFL3Q6UXB1 125 aa11.74□□□□□ -0.53
UBA3-201ENST00000349511 ZNF627Q7L945 461 aa11.74□□□□□ -0.53
UBA3-201ENST00000349511 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.74□□□□□ -0.53
UBA3-201ENST00000349511 GPR137CQ8N3F9 429 aa11.74□□□□□ -0.53
UBA3-201ENST00000349511 ZNF454Q8N9F8 522 aa11.74□□□□□ -0.53
UBA3-201ENST00000349511 TMEM229BQ8NBD8 167 aa11.74□□□□□ -0.53
UBA3-201ENST00000349511 OR2AJ1Q8NGZ0 328 aa11.74□□□□□ -0.53
UBA3-201ENST00000349511 SEH1LQ96EE3 360 aa11.74□□□□□ -0.53
UBA3-201ENST00000349511 DMRTA2Q96SC8 542 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms