RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 ASCL5Q7RTU5 278 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 OR2AE1Q8NHA4 323 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 TCTEX1D2Q8WW35 142 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 MAP6Q96JE9 813 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 ABHD1Q96SE0 405 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 EMC6Q9BV81 110 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 OR11A1Q9GZK7 315 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 A0A0B4J2A0 478 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 IFITM5A6NNB3 132 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 NRASP01111 189 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 PPP3CBP16298 524 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 FGF9P31371 208 aaPredicted RBP9.75□□□□□ -0.85
CLCN6-202ENST00000346436 ZNF136P52737 540 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 OR10K1Q8NGX5 313 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 NUBPLQ8TB37 319 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 SECTM1Q8WVN6 248 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 NDFIP1Q9BT67 221 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 SHPKQ9UHJ6 478 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 TRPM6Q9BX84 2022 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 S100A11P31949 105 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 DRD3P35462 400 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 CAMLGP49069 296 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 HBG1P69891 147 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 HBG2P69892 147 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 ST3GAL2Q16842 350 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 RHOUQ7L0Q8 258 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 TCTE3Q8IZS6 198 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 RELL2Q8NC24 303 aaPredicted RBP9.75□□□□□ -0.85
CLCN6-202ENST00000346436 FGGYQ96C11 551 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 HRH4Q9H3N8 390 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 TAS2R4Q9NYW5 299 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 TAAR3PQ9P1P4 343 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 SIGLEC7Q9Y286 467 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 CENPVL1A0A0U1RR11 272 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 AQP7O14520 342 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 PRAMEF5Q5TYX0 476 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 PRAMEF6Q5VXH4 476 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 TFAP2EQ6VUC0 442 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 CDC20BQ86Y33 519 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 OR5D13Q8NGL4 314 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 FBLIM1Q8WUP2 373 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 TMEM230Q96A57 120 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 SPACA5Q96QH8 159 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 JMJD8Q96S16 334 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 RLFQ13129 1914 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 TNFSF12O43508 249 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 CLN5O75503 358 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 PMP2P02689 132 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 B4GALT1P15291 398 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 LUMP51884 338 aaPredicted RBP9.74□□□□□ -0.85
CLCN6-202ENST00000346436 RPL18Q07020 188 aaKnown RBP9.74□□□□□ -0.85
CLCN6-202ENST00000346436 TOR2AQ5JU69 321 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 TMUB2Q71RG4 321 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 MDGA2Q7Z553 956 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 MRGPRGQ86SM5 289 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 ASH2LQ9UBL3 628 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 WDR81Q562E7 1941 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 LANCL1O43813 399 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 GUSBP08236 651 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 CT62P0C5K7 136 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 STAC2Q6ZMT1 411 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 MUC20Q8N307 709 aaPredicted RBP9.74□□□□□ -0.85
CLCN6-202ENST00000346436 LIN37Q96GY3 246 aaPredicted RBP9.74□□□□□ -0.85
CLCN6-202ENST00000346436 ZNF391Q9UJN7 358 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 SSX5O60225 188 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 CDC14BO60729 498 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 KIR2DL1P43626 348 aaPredicted RBP9.74□□□□□ -0.85
CLCN6-202ENST00000346436 RAB4BP61018 213 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 ELFN2Q5R3F8 820 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 AADACL4Q5VUY2 407 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 TMPRSS7Q7RTY8 843 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 H2BFWTQ7Z2G1 175 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 VN1R4Q7Z5H5 301 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 ARIH2OSQ8N7S6 290 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 ST8SIA2Q92186 375 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 TM4SF19Q96DZ7 209 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 MED30Q96HR3 178 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 THYN1Q9P016 225 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 hADV38S2A0JD32 116 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 LINC00303Q3SY05 128 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 KRBOX4Q5JUW0 171 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 TRAT1Q6PIZ9 186 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 OR51F2Q8NH61 342 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 A0A1W2PPV9 198 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 AIPO00170 330 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 FBXO24O75426 580 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 OR8U8P0C7N1 319 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 TUBG1P23258 451 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 ZNF626Q68DY1 528 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 MAMSTRQ6ZN01 415 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 SLC30A7Q8NEW0 376 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 CHAC2Q8WUX2 184 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 GSX2Q9BZM3 304 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 SCN4AP35499 1836 aa9.74□□□□□ -0.85
CLCN6-202ENST00000346436 IGHV3-15A0A0B4J1V0 119 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 ZNF816-ZNF321PA0A0X1KG74 233 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 EML2O95834 649 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 SP1P08047 785 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 TMEM267Q0VDI3 215 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms