RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 SEMA6DQ8NFY4 1073 aa11.76□□□□□ -0.53
CDC42-202ENST00000344548 ENKURQ8TC29 256 aa11.76□□□□□ -0.53
CDC42-202ENST00000344548 WNT2BQ93097 391 aa11.76□□□□□ -0.53
CDC42-202ENST00000344548 FOXRED1Q96CU9 486 aaPredicted RBP11.76□□□□□ -0.53
CDC42-202ENST00000344548 GPR137Q96N19 417 aa11.76□□□□□ -0.53
CDC42-202ENST00000344548 UQCC2Q9BRT2 126 aa11.76□□□□□ -0.53
CDC42-202ENST00000344548 BANF2Q9H503 90 aa11.76□□□□□ -0.53
CDC42-202ENST00000344548 RBMX2Q9Y388 322 aaKnown RBP11.76□□□□□ -0.53
CDC42-202ENST00000344548 A0A0A6YYD4 124 aa11.75□□□□□ -0.53
CDC42-202ENST00000344548 FAM240BA0A1B0GVZ2 78 aa11.75□□□□□ -0.53
CDC42-202ENST00000344548 RAB27BO00194 218 aa11.75□□□□□ -0.53
CDC42-202ENST00000344548 THBS4P35443 961 aa11.75□□□□□ -0.53
CDC42-202ENST00000344548 MNDAP41218 407 aa11.75□□□□□ -0.53
CDC42-202ENST00000344548 WNT5AP41221 380 aa11.75□□□□□ -0.53
CDC42-202ENST00000344548 CCR6P51684 374 aa11.75□□□□□ -0.53
CDC42-202ENST00000344548 RAB25P57735 213 aa11.75□□□□□ -0.53
CDC42-202ENST00000344548 PLA1AQ53H76 456 aa11.75□□□□□ -0.53
CDC42-202ENST00000344548 ZC3HAV1LQ96H79 300 aaKnown RBP11.75□□□□□ -0.53
CDC42-202ENST00000344548 OR51B6Q9H340 312 aa11.75□□□□□ -0.53
CDC42-202ENST00000344548 MRPS28Q9Y2Q9 187 aaKnown RBP11.75□□□□□ -0.53
CDC42-202ENST00000344548 STARD10Q9Y365 291 aa11.75□□□□□ -0.53
CDC42-202ENST00000344548 PIEZO1Q92508 2521 aa11.75□□□□□ -0.53
CDC42-202ENST00000344548 TMEM14DPA8MWL7 114 aa11.75□□□□□ -0.53
CDC42-202ENST00000344548 AHRRA9YTQ3 701 aa11.75□□□□□ -0.53
CDC42-202ENST00000344548 MTRF1O75570 445 aaKnown RBP11.75□□□□□ -0.53
CDC42-202ENST00000344548 TPOP07202 933 aa11.75□□□□□ -0.53
CDC42-202ENST00000344548 FAM87AP0C7U9 286 aa11.75□□□□□ -0.53
CDC42-202ENST00000344548 HOXD11P31277 338 aaPredicted RBP11.75□□□□□ -0.53
CDC42-202ENST00000344548 GK2Q14410 553 aaPredicted RBP11.75□□□□□ -0.53
CDC42-202ENST00000344548 NSUN5P2Q63ZY6 315 aa11.75□□□□□ -0.53
CDC42-202ENST00000344548 CISD2Q8N5K1 135 aaKnown RBP11.75□□□□□ -0.53
CDC42-202ENST00000344548 OR10K1Q8NGX5 313 aa11.75□□□□□ -0.53
CDC42-202ENST00000344548 FCAMRQ8WWV6 532 aa11.75□□□□□ -0.53
CDC42-202ENST00000344548 GLRX2Q9NS18 164 aa11.75□□□□□ -0.53
CDC42-202ENST00000344548 ZNF629Q9UEG4 869 aaPredicted RBP11.75□□□□□ -0.53
CDC42-202ENST00000344548 RELNP78509 3460 aa11.75□□□□□ -0.53
CDC42-202ENST00000344548 OR14I1A6ND48 311 aa11.74□□□□□ -0.53
CDC42-202ENST00000344548 ALDOBP05062 364 aa11.74□□□□□ -0.53
CDC42-202ENST00000344548 GSG1Q2KHT4 349 aa11.74□□□□□ -0.53
CDC42-202ENST00000344548 PRR30Q53SZ7 412 aaPredicted RBP11.74□□□□□ -0.53
CDC42-202ENST00000344548 ZNF324BQ6AW86 544 aaPredicted RBP11.74□□□□□ -0.53
CDC42-202ENST00000344548 RPUSD3Q6P087 351 aaKnown RBP11.74□□□□□ -0.53
CDC42-202ENST00000344548 UTS2BQ765I0 119 aa11.74□□□□□ -0.53
CDC42-202ENST00000344548 ZNF610Q8N9Z0 462 aa11.74□□□□□ -0.53
CDC42-202ENST00000344548 STARD4Q96DR4 205 aa11.74□□□□□ -0.53
CDC42-202ENST00000344548 C1QTNF6Q9BXI9 259 aa11.74□□□□□ -0.53
CDC42-202ENST00000344548 OPN3Q9H1Y3 402 aaPredicted RBP11.74□□□□□ -0.53
CDC42-202ENST00000344548 DIABLOQ9NR28 239 aa11.74□□□□□ -0.53
CDC42-202ENST00000344548 ZGRF1Q86YA3 2104 aa11.74□□□□□ -0.53
CDC42-202ENST00000344548 BPNT1O95861 308 aa11.74□□□□□ -0.53
CDC42-202ENST00000344548 CGAP01215 116 aa11.74□□□□□ -0.53
CDC42-202ENST00000344548 GIFP27352 417 aa11.74□□□□□ -0.53
CDC42-202ENST00000344548 ARR3P36575 388 aa11.74□□□□□ -0.53
CDC42-202ENST00000344548 OR8B8Q15620 311 aa11.74□□□□□ -0.53
CDC42-202ENST00000344548 GABRA6Q16445 453 aa11.74□□□□□ -0.53
CDC42-202ENST00000344548 Q6ZT83 130 aa11.74□□□□□ -0.53
CDC42-202ENST00000344548 ZNF554Q86TJ5 538 aa11.74□□□□□ -0.53
CDC42-202ENST00000344548 CD163Q86VB7 1156 aa11.74□□□□□ -0.53
CDC42-202ENST00000344548 OR4D10Q8NGI6 311 aa11.74□□□□□ -0.53
CDC42-202ENST00000344548 PP6455Q8WZ26 134 aa11.74□□□□□ -0.53
CDC42-202ENST00000344548 SPSB4Q96A44 273 aa11.74□□□□□ -0.53
CDC42-202ENST00000344548 GPER1Q99527 375 aa11.74□□□□□ -0.53
CDC42-202ENST00000344548 LPAR5Q9H1C0 372 aa11.74□□□□□ -0.53
CDC42-202ENST00000344548 LILRA1O75019 489 aa11.73□□□□□ -0.53
CDC42-202ENST00000344548 HNRNPCP07910 306 aaKnown RBP eCLIP11.73□□□□□ -0.53
CDC42-202ENST00000344548 ERCC1P07992 297 aaPredicted RBP11.73□□□□□ -0.53
CDC42-202ENST00000344548 PTGFRP43088 359 aa11.73□□□□□ -0.53
CDC42-202ENST00000344548 VEGFCP49767 419 aa11.73□□□□□ -0.53
CDC42-202ENST00000344548 RIPPLY1Q0D2K3 151 aa11.73□□□□□ -0.53
CDC42-202ENST00000344548 SLC22A6Q4U2R8 563 aa11.73□□□□□ -0.53
CDC42-202ENST00000344548 OLFML2AQ68BL7 652 aa11.73□□□□□ -0.53
CDC42-202ENST00000344548 TMEM42Q69YG0 159 aa11.73□□□□□ -0.53
CDC42-202ENST00000344548 SFRP4Q6FHJ7 346 aaPredicted RBP11.73□□□□□ -0.53
CDC42-202ENST00000344548 MZT2BQ6NZ67 158 aa11.73□□□□□ -0.53
CDC42-202ENST00000344548 PLET1Q6UQ28 207 aa11.73□□□□□ -0.53
CDC42-202ENST00000344548 GABRG1Q8N1C3 465 aa11.73□□□□□ -0.53
CDC42-202ENST00000344548 UBASH3BQ8TF42 649 aa11.73□□□□□ -0.53
CDC42-202ENST00000344548 ITPKCQ96DU7 683 aa11.73□□□□□ -0.53
CDC42-202ENST00000344548 HRASLSQ9HDD0 168 aa11.73□□□□□ -0.53
CDC42-202ENST00000344548 ATPIF1Q9UII2 106 aa11.73□□□□□ -0.53
CDC42-202ENST00000344548 FAM230AA0A1W2PPH8 454 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 MBD3L4A6NDZ8 208 aaPredicted RBP11.72□□□□□ -0.53
CDC42-202ENST00000344548 MBD3L3A6NE82 208 aaPredicted RBP11.72□□□□□ -0.53
CDC42-202ENST00000344548 TMEM235A6NFC5 223 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 MBD3L5A6NJ08 208 aaPredicted RBP11.72□□□□□ -0.53
CDC42-202ENST00000344548 SOCS1O15524 211 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 ANGPTL7O43827 346 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 AGFG2O95081 481 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 MPIG6BO95866 241 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 PLATP00750 562 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 COX5BP10606 129 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 NAT2P11245 290 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 ZNF14P17017 642 aaPredicted RBP11.72□□□□□ -0.53
CDC42-202ENST00000344548 SNTB2Q13425 540 aaKnown RBP11.72□□□□□ -0.53
CDC42-202ENST00000344548 IGFBP7Q16270 282 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 RFPL4BQ6ZWI9 263 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 MBD3L2Q8NHZ7 208 aaPredicted RBP11.72□□□□□ -0.53
CDC42-202ENST00000344548 HPS1Q92902 700 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 DVL3Q92997 716 aaPredicted RBP11.72□□□□□ -0.53
CDC42-202ENST00000344548 SEH1LQ96EE3 360 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms