RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 TIGITQ495A1 244 aa13.46□□□□□ -0.25
UBE3B-202ENST00000342494 PHYHD1Q5SRE7 291 aa13.46□□□□□ -0.25
UBE3B-202ENST00000342494 RHBDD2Q6NTF9 364 aa13.46□□□□□ -0.25
UBE3B-202ENST00000342494 LCN15Q6UWW0 184 aa13.46□□□□□ -0.25
UBE3B-202ENST00000342494 SERTM2A0A1B0GWG4 89 aa13.46□□□□□ -0.26
UBE3B-202ENST00000342494 PEX11BO96011 259 aa13.46□□□□□ -0.26
UBE3B-202ENST00000342494 GNG10P50151 68 aa13.46□□□□□ -0.26
UBE3B-202ENST00000342494 TIGD3Q6B0B8 471 aa13.46□□□□□ -0.26
UBE3B-202ENST00000342494 LINC01555Q8NAE3 123 aa13.46□□□□□ -0.26
UBE3B-202ENST00000342494 OTOSQ8NHW6 89 aa13.46□□□□□ -0.26
UBE3B-202ENST00000342494 BTG1P62324 171 aa13.46□□□□□ -0.26
UBE3B-202ENST00000342494 BTNL3Q6UXE8 466 aa13.46□□□□□ -0.26
UBE3B-202ENST00000342494 TMUB2Q71RG4 321 aa13.46□□□□□ -0.26
UBE3B-202ENST00000342494 RTN4IP1Q8WWV3 396 aaPredicted RBP13.46□□□□□ -0.26
UBE3B-202ENST00000342494 RND1Q92730 232 aa13.46□□□□□ -0.26
UBE3B-202ENST00000342494 RAB1CQ92928 201 aa13.46□□□□□ -0.26
UBE3B-202ENST00000342494 SPSB1Q96BD6 273 aa13.46□□□□□ -0.26
UBE3B-202ENST00000342494 TVP23CQ96ET8 276 aa13.46□□□□□ -0.26
UBE3B-202ENST00000342494 GAB2Q9UQC2 676 aa13.46□□□□□ -0.26
UBE3B-202ENST00000342494 JTBO76095 146 aa13.45□□□□□ -0.26
UBE3B-202ENST00000342494 HPP00738 406 aa13.45□□□□□ -0.26
UBE3B-202ENST00000342494 FUT3P21217 361 aa13.45□□□□□ -0.26
UBE3B-202ENST00000342494 FUT7Q11130 342 aa13.45□□□□□ -0.26
UBE3B-202ENST00000342494 SPINK14Q6IE38 97 aa13.45□□□□□ -0.26
UBE3B-202ENST00000342494 ERGIC1Q969X5 290 aa13.45□□□□□ -0.26
UBE3B-202ENST00000342494 ACY3Q96HD9 319 aa13.45□□□□□ -0.26
UBE3B-202ENST00000342494 ARHGDIGQ99819 225 aa13.45□□□□□ -0.26
UBE3B-202ENST00000342494 TCFL5Q9UL49 500 aa13.45□□□□□ -0.26
UBE3B-202ENST00000342494 ZNF785A8K8V0 405 aa13.45□□□□□ -0.26
UBE3B-202ENST00000342494 KRBOX1C9JBD0 128 aa13.45□□□□□ -0.26
UBE3B-202ENST00000342494 TAAR5O14804 337 aa13.45□□□□□ -0.26
UBE3B-202ENST00000342494 BTN1A1Q13410 526 aa13.45□□□□□ -0.26
UBE3B-202ENST00000342494 ARHGEF39Q8N4T4 335 aa13.45□□□□□ -0.26
UBE3B-202ENST00000342494 ISG20L2Q9H9L3 353 aaKnown RBP13.45□□□□□ -0.26
UBE3B-202ENST00000342494 OCIAD1Q9NX40 245 aa13.45□□□□□ -0.26
UBE3B-202ENST00000342494 IGLV3-16A0A075B6K0 115 aa13.45□□□□□ -0.26
UBE3B-202ENST00000342494 A0A0B4J2E0 115 aa13.45□□□□□ -0.26
UBE3B-202ENST00000342494 A0A1B0GTL3 188 aa13.45□□□□□ -0.26
UBE3B-202ENST00000342494 A0A1B0GX12 115 aa13.45□□□□□ -0.26
UBE3B-202ENST00000342494 MFSD4AQ8N468 514 aa13.45□□□□□ -0.26
UBE3B-202ENST00000342494 OR2Y1Q8NGV0 311 aa13.45□□□□□ -0.26
UBE3B-202ENST00000342494 MARCH1Q8TCQ1 289 aa13.45□□□□□ -0.26
UBE3B-202ENST00000342494 OR8B4Q96RC9 309 aa13.45□□□□□ -0.26
UBE3B-202ENST00000342494 A0A0B4J203 849 aa13.45□□□□□ -0.26
UBE3B-202ENST00000342494 OR5I1Q13606 314 aa13.45□□□□□ -0.26
UBE3B-202ENST00000342494 PABPC1L2AQ5JQF8 200 aa13.45□□□□□ -0.26
UBE3B-202ENST00000342494 LYSMD2Q8IV50 215 aa13.45□□□□□ -0.26
UBE3B-202ENST00000342494 SLC35B4Q969S0 331 aa13.45□□□□□ -0.26
UBE3B-202ENST00000342494 TRPM3Q9HCF6 1732 aaPredicted RBP13.45□□□□□ -0.26
UBE3B-202ENST00000342494 SERPINE3A8MV23 424 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 NHSQ6T4R5 1651 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 SEC14L6B5MCN3 397 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 NGFP01138 241 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 CD3DP04234 171 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 SLC25A6P12236 298 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 CBR1P16152 277 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 COX5AP20674 150 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 MAGEB1P43366 347 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 FABP5Q01469 135 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 FMODQ06828 376 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 PLA1AQ53H76 456 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 Q56UQ5 140 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 C16orf47Q6ZP98 133 aaPredicted RBP13.44□□□□□ -0.26
UBE3B-202ENST00000342494 ABI3BPQ7Z7G0 1075 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 OR4F5Q8NH21 305 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 LHX4Q969G2 390 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 TM4SF19Q96DZ7 209 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 OR4F4Q96R69 305 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 CHST6Q9GZX3 395 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 MAGT1Q9H0U3 335 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 CDX4O14627 284 aaPredicted RBP13.44□□□□□ -0.26
UBE3B-202ENST00000342494 ZNF32P17041 273 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 COX7A1P24310 79 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 TOR2AQ5JU69 321 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 ORAI1Q96D31 301 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 MBP02144 154 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 MARC2Q969Z3 335 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 TAAR3PQ9P1P4 343 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 E5RGE8 158 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 NME2P1O60361 137 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 IL5P05113 134 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 CCL4P13236 92 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 SNRPNP63162 240 aaKnown RBP13.44□□□□□ -0.26
UBE3B-202ENST00000342494 YBX1P67809 324 aaKnown RBP13.44□□□□□ -0.26
UBE3B-202ENST00000342494 PRICKLE4Q2TBC4 344 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 B3GNTL1Q67FW5 361 aaPredicted RBP13.44□□□□□ -0.26
UBE3B-202ENST00000342494 ZNF774Q6NX45 483 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 NSG2Q9Y328 171 aa13.44□□□□□ -0.26
UBE3B-202ENST00000342494 A0A1B0GTQ1 180 aa13.43□□□□□ -0.26
UBE3B-202ENST00000342494 H3BMH7 237 aa13.43□□□□□ -0.26
UBE3B-202ENST00000342494 GIPP09681 153 aaPredicted RBP13.43□□□□□ -0.26
UBE3B-202ENST00000342494 PPP1CAP62136 330 aa13.43□□□□□ -0.26
UBE3B-202ENST00000342494 FAAP20Q6NZ36 180 aa13.43□□□□□ -0.26
UBE3B-202ENST00000342494 RNF24Q9Y225 148 aa13.43□□□□□ -0.26
UBE3B-202ENST00000342494 KCNE1BA0A087WTH5 132 aa13.43□□□□□ -0.26
UBE3B-202ENST00000342494 SEMG1P04279 462 aa13.43□□□□□ -0.26
UBE3B-202ENST00000342494 RPL7L1Q6DKI1 246 aaKnown RBP13.43□□□□□ -0.26
UBE3B-202ENST00000342494 TMEM56Q96MV1 263 aa13.43□□□□□ -0.26
UBE3B-202ENST00000342494 CLEC18AA5D8T8 446 aa13.43□□□□□ -0.26
UBE3B-202ENST00000342494 RER1O15258 196 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms