RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 RPS11P62280 158 aaKnown RBP eCLIP11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 INSM1Q01101 510 aaPredicted RBP11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 SKP2Q13309 424 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 KIAA0141Q14154 515 aaPredicted RBP11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 RGS7BPQ6MZT1 257 aaPredicted RBP11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 SLC22A25Q6T423 547 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 MRPL21Q7Z2W9 205 aaKnown RBP11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 CMTM1Q8IZ96 169 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 OR2G3Q8NGZ4 309 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 UBALD1Q8TB05 177 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 ZNF286AQ9HBT8 521 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 VSIG4Q9Y279 399 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 TRAV20A0A0B4J274 112 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 BCAT2O15382 392 aaPredicted RBP11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 CST7O76096 145 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 TK1P04183 234 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 TAGLN2P37802 199 aaKnown RBP11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 CXCL12P48061 93 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 PNLIPRP2P54317 469 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 RRADP55042 308 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 SLC37A1P57057 533 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 EFNB1P98172 346 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 NHLRC3Q5JS37 347 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 ZNF485Q8NCK3 441 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 GJC3Q8NFK1 279 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 GPX8Q8TED1 209 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 SDSLQ96GA7 329 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 ZNF275Q9NSD4 429 aaPredicted RBP11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 PRSS44E7EML9 344 aa11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 M0R135 149 aa11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 SIGLEC6O43699 453 aa11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 ARG1P05089 322 aa11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 APOBEC1P41238 236 aaKnown RBP11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 PPIAP62937 165 aaKnown RBP11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 DCDP81605 110 aaKnown RBP11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 LINC01590Q5TEZ4 76 aa11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 TMEM123Q8N131 208 aa11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 SEMA6DQ8NFY4 1073 aa11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 ZNF799Q96GE5 643 aa11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 C2orf50Q96LR7 162 aa11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 CLCC1Q96S66 551 aa11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 HINT2Q9BX68 163 aa11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 PRR32B1ATL7 298 aa11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 PLPP3O14495 311 aa11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 EIF2S3LQ2VIR3 472 aaKnown RBP11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 AAED1Q7RTV5 226 aa11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 FAM24BQ8N5W8 94 aa11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 OR51F2Q8NH61 342 aa11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 OR1L3Q8NH93 324 aa11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 GPBAR1Q8TDU6 330 aa11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 PTPMT1Q8WUK0 201 aaPredicted RBP11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 RTN4IP1Q8WWV3 396 aaPredicted RBP11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 ADAT3Q96EY9 351 aaPredicted RBP11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 GNRHR2Q96P88 292 aa11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 KLK13Q9UKR3 277 aa11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 AMDHD2Q9Y303 409 aa11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 BCKDHBP21953 392 aa11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 RFC3P40938 356 aa11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 TESK1Q15569 626 aa11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 SHEQ5VZ18 495 aa11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 DOK3Q7L591 496 aa11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 OR10G3Q8NGC4 313 aa11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 OR13C8Q8NGS7 320 aa11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 SGK3Q96BR1 496 aa11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 TM4SF19Q96DZ7 209 aa11.08□□□□□ -0.64
SNRNP48-201ENST00000342415 ZNHIT1O43257 154 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 CD37P11049 281 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 FOSL2P15408 326 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 HIST2H3PS2Q5TEC6 136 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 ZNF100Q8IYN0 542 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 ZNF709Q8N972 641 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 WDSUB1Q8N9V3 476 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 FAAP24Q9BTP7 215 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 TTC28Q96AY4 2481 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 SCN5AQ14524 2016 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 MEX3AA1L020 520 aaKnown RBP11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 HSD17B6O14756 317 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 MSTNO14793 375 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 ST8SIA3O43173 380 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 TNFSF14O43557 240 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 CRHP06850 196 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 HOXD4P09016 255 aaPredicted RBP11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 VSIG8P0DPA2 414 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 S100A12P80511 92 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 HYAL1Q12794 435 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 KISS1Q15726 138 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 RSPO4Q2I0M5 234 aaPredicted RBP11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 MIDNQ504T8 468 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 CLEC18BQ6UXF7 455 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 PLPP5Q8NEB5 264 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 OR1N1Q8NGS0 311 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 AKR7LQ8NHP1 331 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 MITD1Q8WV92 249 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 ALKBH3Q96Q83 286 aaPredicted RBP11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 NELFAQ9H3P2 528 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 MRPL22Q9NWU5 206 aaKnown RBP11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 PIPOXQ9P0Z9 390 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 ZNF724A8MTY0 619 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 JTBO76095 146 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 DUS4LO95620 317 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms