RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 PPP1R32Q7Z5V6 425 aa17.69■□□□□ 0.42
SPG7-202ENST00000341316 LRRC18Q8N456 261 aa17.69■□□□□ 0.42
SPG7-202ENST00000341316 ZNF775Q96BV0 537 aaPredicted RBP17.69■□□□□ 0.42
SPG7-202ENST00000341316 ZNF837Q96EG3 531 aaPredicted RBP17.69■□□□□ 0.42
SPG7-202ENST00000341316 VSIG4Q9Y279 399 aa17.69■□□□□ 0.42
SPG7-202ENST00000341316 A0A1W2PP11 408 aa17.68■□□□□ 0.42
SPG7-202ENST00000341316 NPIPA2E9PIF3 369 aa17.68■□□□□ 0.42
SPG7-202ENST00000341316 NPIPA3F8WFD2 350 aa17.68■□□□□ 0.42
SPG7-202ENST00000341316 SSX5O60225 188 aa17.68■□□□□ 0.42
SPG7-202ENST00000341316 HLA-AP01891 365 aaKnown RBP17.68■□□□□ 0.42
SPG7-202ENST00000341316 MSR1P21757 451 aa17.68■□□□□ 0.42
SPG7-202ENST00000341316 GRB2P62993 217 aaKnown RBP17.68■□□□□ 0.42
SPG7-202ENST00000341316 FGL1Q08830 312 aa17.68■□□□□ 0.42
SPG7-202ENST00000341316 RSPO4Q2I0M5 234 aaPredicted RBP17.68■□□□□ 0.42
SPG7-202ENST00000341316 RSPO1Q2MKA7 263 aaPredicted RBP17.68■□□□□ 0.42
SPG7-202ENST00000341316 JMJD6Q6NYC1 403 aaPredicted RBP17.68■□□□□ 0.42
SPG7-202ENST00000341316 ZNF101Q8IZC7 436 aa17.68■□□□□ 0.42
SPG7-202ENST00000341316 KCNRGQ8N5I3 272 aa17.68■□□□□ 0.42
SPG7-202ENST00000341316 OR10R2Q8NGX6 335 aa17.68■□□□□ 0.42
SPG7-202ENST00000341316 OR14K1Q8NGZ2 314 aa17.68■□□□□ 0.42
SPG7-202ENST00000341316 LIN37Q96GY3 246 aaPredicted RBP17.68■□□□□ 0.42
SPG7-202ENST00000341316 PDCD10Q9BUL8 212 aa17.68■□□□□ 0.42
SPG7-202ENST00000341316 LPAR5Q9H1C0 372 aa17.68■□□□□ 0.42
SPG7-202ENST00000341316 NELFAQ9H3P2 528 aa17.68■□□□□ 0.42
SPG7-202ENST00000341316 FBLN5Q9UBX5 448 aa17.68■□□□□ 0.42
SPG7-202ENST00000341316 TNFSF18Q9UNG2 199 aa17.68■□□□□ 0.42
SPG7-202ENST00000341316 MRPS28Q9Y2Q9 187 aaKnown RBP17.68■□□□□ 0.42
SPG7-202ENST00000341316 EIF1BO60739 113 aaKnown RBP17.68■□□□□ 0.42
SPG7-202ENST00000341316 STK17BO94768 372 aa17.68■□□□□ 0.42
SPG7-202ENST00000341316 ERCC1P07992 297 aaPredicted RBP17.68■□□□□ 0.42
SPG7-202ENST00000341316 OTX2P32243 289 aa17.68■□□□□ 0.42
SPG7-202ENST00000341316 LUMP51884 338 aaPredicted RBP17.68■□□□□ 0.42
SPG7-202ENST00000341316 BEX5Q5H9J7 111 aa17.68■□□□□ 0.42
SPG7-202ENST00000341316 ARMC10Q8N2F6 343 aa17.68■□□□□ 0.42
SPG7-202ENST00000341316 SEC22AQ96IW7 307 aa17.68■□□□□ 0.42
SPG7-202ENST00000341316 ZNF75AQ96N20 296 aa17.68■□□□□ 0.42
SPG7-202ENST00000341316 KCNK7Q9Y2U2 307 aa17.68■□□□□ 0.42
SPG7-202ENST00000341316 LOC100509620A0A075B734 347 aa17.67■□□□□ 0.42
SPG7-202ENST00000341316 KANTRA0A1W2PQU2 76 aa17.67■□□□□ 0.42
SPG7-202ENST00000341316 F5H5K5 113 aa17.67■□□□□ 0.42
SPG7-202ENST00000341316 CBR3O75828 277 aa17.67■□□□□ 0.42
SPG7-202ENST00000341316 CTSSP25774 331 aa17.67■□□□□ 0.42
SPG7-202ENST00000341316 ZNF133P52736 654 aaPredicted RBP17.67■□□□□ 0.42
SPG7-202ENST00000341316 B3GALT5-AS1P59052 145 aa17.67■□□□□ 0.42
SPG7-202ENST00000341316 ATXN7L3Q14CW9 347 aaPredicted RBP17.67■□□□□ 0.42
SPG7-202ENST00000341316 C11orf87Q6NUJ2 197 aa17.67■□□□□ 0.42
SPG7-202ENST00000341316 DOK3Q7L591 496 aa17.67■□□□□ 0.42
SPG7-202ENST00000341316 VRK1Q99986 396 aaPredicted RBP17.67■□□□□ 0.42
SPG7-202ENST00000341316 RBM24Q9BX46 236 aaKnown RBP17.67■□□□□ 0.42
SPG7-202ENST00000341316 BANF2Q9H503 90 aa17.67■□□□□ 0.42
SPG7-202ENST00000341316 BARX1Q9HBU1 254 aaPredicted RBP17.67■□□□□ 0.42
SPG7-202ENST00000341316 A0A1B0GW55 424 aa17.67■□□□□ 0.42
SPG7-202ENST00000341316 DUX4L2P0CJ85 424 aa17.67■□□□□ 0.42
SPG7-202ENST00000341316 DUX4L3P0CJ86 424 aa17.67■□□□□ 0.42
SPG7-202ENST00000341316 DUX4L4P0CJ87 422 aa17.67■□□□□ 0.42
SPG7-202ENST00000341316 DUX4L5P0CJ88 424 aa17.67■□□□□ 0.42
SPG7-202ENST00000341316 DUX4L6P0CJ89 424 aa17.67■□□□□ 0.42
SPG7-202ENST00000341316 DUX4L7P0CJ90 424 aa17.67■□□□□ 0.42
SPG7-202ENST00000341316 RAC1P63000 192 aa17.67■□□□□ 0.42
SPG7-202ENST00000341316 CXADRP78310 365 aa17.67■□□□□ 0.42
SPG7-202ENST00000341316 SRSF4Q08170 494 aaKnown RBP17.67■□□□□ 0.42
SPG7-202ENST00000341316 PLAC9Q5JTB6 97 aa17.67■□□□□ 0.42
SPG7-202ENST00000341316 ELP2Q6IA86 826 aa17.67■□□□□ 0.42
SPG7-202ENST00000341316 LIN54Q6MZP7 749 aa17.67■□□□□ 0.42
SPG7-202ENST00000341316 FOXL2NBQ6ZUU3 175 aa17.67■□□□□ 0.42
SPG7-202ENST00000341316 PGAP1Q75T13 922 aa17.67■□□□□ 0.42
SPG7-202ENST00000341316 TIPARPQ7Z3E1 657 aaKnown RBP17.67■□□□□ 0.42
SPG7-202ENST00000341316 YRDCQ86U90 279 aaKnown RBP17.67■□□□□ 0.42
SPG7-202ENST00000341316 SSC4DQ8WTU2 575 aa17.67■□□□□ 0.42
SPG7-202ENST00000341316 TMEM41AQ96HV5 264 aa17.67■□□□□ 0.42
SPG7-202ENST00000341316 COMMD9Q9P000 198 aa17.67■□□□□ 0.42
SPG7-202ENST00000341316 DUX4Q9UBX2 424 aa17.67■□□□□ 0.42
SPG7-202ENST00000341316 FOXD3Q9UJU5 478 aaPredicted RBP17.67■□□□□ 0.42
SPG7-202ENST00000341316 SOCS1O15524 211 aa17.66■□□□□ 0.42
SPG7-202ENST00000341316 MPIG6BO95866 241 aa17.66■□□□□ 0.42
SPG7-202ENST00000341316 IGLV3-1P01715 115 aa17.66■□□□□ 0.42
SPG7-202ENST00000341316 HCKP08631 526 aa17.66■□□□□ 0.42
SPG7-202ENST00000341316 NTF4P34130 210 aa17.66■□□□□ 0.42
SPG7-202ENST00000341316 STARP49675 285 aa17.66■□□□□ 0.42
SPG7-202ENST00000341316 RNASE10Q5GAN6 216 aaKnown RBP17.66■□□□□ 0.42
SPG7-202ENST00000341316 LPCAT3Q6P1A2 487 aa17.66■□□□□ 0.42
SPG7-202ENST00000341316 CRIP3Q6Q6R5 217 aa17.66■□□□□ 0.42
SPG7-202ENST00000341316 PGAM5Q96HS1 289 aa17.66■□□□□ 0.42
SPG7-202ENST00000341316 NAA11Q9BSU3 229 aaPredicted RBP17.66■□□□□ 0.42
SPG7-202ENST00000341316 TCFL5Q9UL49 500 aa17.66■□□□□ 0.42
SPG7-202ENST00000341316 NCOA6Q14686 2063 aaPredicted RBP17.66■□□□□ 0.42
SPG7-202ENST00000341316 COL27A1Q8IZC6 1860 aaPredicted RBP17.66■□□□□ 0.42
SPG7-202ENST00000341316 B4E171 279 aa17.65■□□□□ 0.42
SPG7-202ENST00000341316 DISC1C4P0D8 188 aa17.65■□□□□ 0.42
SPG7-202ENST00000341316 DHHO43323 396 aa17.65■□□□□ 0.42
SPG7-202ENST00000341316 BCL2L11O43521 198 aa17.65■□□□□ 0.42
SPG7-202ENST00000341316 OR2F2O95006 317 aa17.65■□□□□ 0.42
SPG7-202ENST00000341316 VAMP5O95183 116 aa17.65■□□□□ 0.42
SPG7-202ENST00000341316 DBHP09172 617 aa17.65■□□□□ 0.42
SPG7-202ENST00000341316 RFPL3SP0C7P2 107 aa17.65■□□□□ 0.42
SPG7-202ENST00000341316 SLC25A4P12235 298 aa17.65■□□□□ 0.42
SPG7-202ENST00000341316 HRH1P35367 487 aa17.65■□□□□ 0.42
SPG7-202ENST00000341316 TSPAN7P41732 249 aa17.65■□□□□ 0.42
SPG7-202ENST00000341316 CSNK2A1P68400 391 aaPredicted RBP17.65■□□□□ 0.42
SPG7-202ENST00000341316 OR2F1Q13607 317 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms