RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 CX3CR1P49238 355 aa12.74□□□□□ -0.37
CPSF7-201ENST00000340437 GABREP78334 506 aa12.74□□□□□ -0.37
CPSF7-201ENST00000340437 ZNF345Q14585 488 aa12.74□□□□□ -0.37
CPSF7-201ENST00000340437 PDCD1Q15116 288 aa12.74□□□□□ -0.37
CPSF7-201ENST00000340437 SP6Q3SY56 376 aa12.74□□□□□ -0.37
CPSF7-201ENST00000340437 TMEM128Q5BJH2 165 aa12.74□□□□□ -0.37
CPSF7-201ENST00000340437 LINC00518Q8N0U6 118 aa12.74□□□□□ -0.37
CPSF7-201ENST00000340437 ZDHHC22Q8N966 263 aa12.74□□□□□ -0.37
CPSF7-201ENST00000340437 PRELID3BQ9Y3B1 194 aa12.74□□□□□ -0.37
CPSF7-201ENST00000340437 A0A1B0GX78 115 aa12.74□□□□□ -0.37
CPSF7-201ENST00000340437 SLC33A1O00400 549 aaPredicted RBP12.74□□□□□ -0.37
CPSF7-201ENST00000340437 CDC14BO60729 498 aa12.74□□□□□ -0.37
CPSF7-201ENST00000340437 SRSF10O75494 262 aaKnown RBP12.74□□□□□ -0.37
CPSF7-201ENST00000340437 ZNF43P17038 809 aa12.74□□□□□ -0.37
CPSF7-201ENST00000340437 ITGA3P26006 1051 aa12.74□□□□□ -0.37
CPSF7-201ENST00000340437 MMP16P51512 607 aa12.74□□□□□ -0.37
CPSF7-201ENST00000340437 TMEM50BP56557 158 aa12.74□□□□□ -0.37
CPSF7-201ENST00000340437 PNLDC1Q8NA58 520 aaKnown RBP12.74□□□□□ -0.37
CPSF7-201ENST00000340437 OR10G3Q8NGC4 313 aa12.74□□□□□ -0.37
CPSF7-201ENST00000340437 SLC2A4RGQ9NR83 387 aa12.74□□□□□ -0.37
CPSF7-201ENST00000340437 FLVCR1Q9Y5Y0 555 aa12.74□□□□□ -0.37
CPSF7-201ENST00000340437 EFNA2O43921 213 aa12.73□□□□□ -0.37
CPSF7-201ENST00000340437 FCGR2AP12318 317 aa12.73□□□□□ -0.37
CPSF7-201ENST00000340437 FAHP16930 419 aa12.73□□□□□ -0.37
CPSF7-201ENST00000340437 FXYD4P59646 89 aa12.73□□□□□ -0.37
CPSF7-201ENST00000340437 C20orf196Q8IYI0 205 aa12.73□□□□□ -0.37
CPSF7-201ENST00000340437 LHFPL6Q9Y693 200 aa12.73□□□□□ -0.37
CPSF7-201ENST00000340437 ZNF814B7Z6K7 855 aa12.73□□□□□ -0.37
CPSF7-201ENST00000340437 OR2J2O76002 312 aa12.73□□□□□ -0.37
CPSF7-201ENST00000340437 HIST1H1DP16402 221 aaKnown RBP12.73□□□□□ -0.37
CPSF7-201ENST00000340437 HNRNPKP61978 463 aaKnown RBP eCLIP12.73□□□□□ -0.371e-8■■□□□ 12.8
CPSF7-201ENST00000340437 OR2A2Q6IF42 318 aa12.73□□□□□ -0.37
CPSF7-201ENST00000340437 FBXO17Q96EF6 278 aa12.73□□□□□ -0.37
CPSF7-201ENST00000340437 C12orf57Q99622 126 aa12.73□□□□□ -0.37
CPSF7-201ENST00000340437 IGHV1OR21-1A0A087WYE8 117 aa12.73□□□□□ -0.37
CPSF7-201ENST00000340437 IGHV1OR15-9A0A0B4J2B8 117 aa12.73□□□□□ -0.37
CPSF7-201ENST00000340437 LILRA5A6NI73 299 aa12.73□□□□□ -0.37
CPSF7-201ENST00000340437 RAB6AP20340 208 aa12.73□□□□□ -0.37
CPSF7-201ENST00000340437 OPRM1P35372 400 aa12.73□□□□□ -0.37
CPSF7-201ENST00000340437 CLDN17P56750 224 aa12.73□□□□□ -0.37
CPSF7-201ENST00000340437 FAM76BQ5HYJ3 339 aa12.73□□□□□ -0.37
CPSF7-201ENST00000340437 PLXDC1Q8IUK5 500 aa12.73□□□□□ -0.37
CPSF7-201ENST00000340437 SLC38A9Q8NBW4 561 aa12.73□□□□□ -0.37
CPSF7-201ENST00000340437 KCNG3Q8TAE7 436 aa12.73□□□□□ -0.37
CPSF7-201ENST00000340437 RHOFQ9HBH0 211 aa12.73□□□□□ -0.37
CPSF7-201ENST00000340437 CYB5R1Q9UHQ9 305 aa12.73□□□□□ -0.37
CPSF7-201ENST00000340437 A0A0A6YYH2 397 aa12.72□□□□□ -0.37
CPSF7-201ENST00000340437 A0A1W2PQD3 144 aa12.72□□□□□ -0.37
CPSF7-201ENST00000340437 A6NJ64 397 aa12.72□□□□□ -0.37
CPSF7-201ENST00000340437 ZNHIT1O43257 154 aa12.72□□□□□ -0.37
CPSF7-201ENST00000340437 DUX1O43812 170 aa12.72□□□□□ -0.37
CPSF7-201ENST00000340437 ANGPTL7O43827 346 aa12.72□□□□□ -0.37
CPSF7-201ENST00000340437 ISG15P05161 165 aa12.72□□□□□ -0.37
CPSF7-201ENST00000340437 PPT1P50897 306 aa12.72□□□□□ -0.37
CPSF7-201ENST00000340437 IAH1Q2TAA2 248 aaPredicted RBP12.72□□□□□ -0.37
CPSF7-201ENST00000340437 PABPC1L2AQ5JQF8 200 aa12.72□□□□□ -0.37
CPSF7-201ENST00000340437 C6orf201Q7Z4U5 140 aa12.72□□□□□ -0.37
CPSF7-201ENST00000340437 OR4A4PQ8NGN8 299 aa12.72□□□□□ -0.37
CPSF7-201ENST00000340437 TMEM230Q96A57 120 aa12.72□□□□□ -0.37
CPSF7-201ENST00000340437 RBM24Q9BX46 236 aaKnown RBP12.72□□□□□ -0.37
CPSF7-201ENST00000340437 SPTAN1Q13813 2472 aaKnown RBP12.72□□□□□ -0.37
CPSF7-201ENST00000340437 IGHG1P01857 330 aa12.72□□□□□ -0.37
CPSF7-201ENST00000340437 ASCL1P50553 236 aa12.72□□□□□ -0.37
CPSF7-201ENST00000340437 CEBPGP53567 150 aa12.72□□□□□ -0.37
CPSF7-201ENST00000340437 FLI1Q01543 452 aaPredicted RBP12.72□□□□□ -0.37
CPSF7-201ENST00000340437 ZNF616Q08AN1 781 aa12.72□□□□□ -0.37
CPSF7-201ENST00000340437 HOGA1Q86XE5 327 aa12.72□□□□□ -0.37
CPSF7-201ENST00000340437 MFSD8Q8NHS3 518 aa12.72□□□□□ -0.37
CPSF7-201ENST00000340437 URM1Q9BTM9 101 aaKnown RBP12.72□□□□□ -0.37
CPSF7-201ENST00000340437 OR10A2Q9H208 303 aa12.72□□□□□ -0.37
CPSF7-201ENST00000340437 ZNF160Q9HCG1 818 aa12.72□□□□□ -0.37
CPSF7-201ENST00000340437 LIPT2A6NK58 231 aa12.72□□□□□ -0.37
CPSF7-201ENST00000340437 MELTFP08582 738 aa12.72□□□□□ -0.37
CPSF7-201ENST00000340437 GALNSP34059 522 aa12.72□□□□□ -0.37
CPSF7-201ENST00000340437 RBMXP38159 391 aaKnown RBP12.72□□□□□ -0.37
CPSF7-201ENST00000340437 RRADP55042 308 aa12.72□□□□□ -0.37
CPSF7-201ENST00000340437 COL13A1Q5TAT6 717 aaPredicted RBP12.72□□□□□ -0.37
CPSF7-201ENST00000340437 OR13G1Q8NGZ3 307 aa12.72□□□□□ -0.37
CPSF7-201ENST00000340437 ZNF285Q96NJ3 590 aa12.72□□□□□ -0.37
CPSF7-201ENST00000340437 CRB3Q9BUF7 120 aa12.72□□□□□ -0.37
CPSF7-201ENST00000340437 TAF9BQ9HBM6 251 aa12.72□□□□□ -0.37
CPSF7-201ENST00000340437 UQCC1Q9NVA1 299 aa12.72□□□□□ -0.37
CPSF7-201ENST00000340437 IL2RAP01589 272 aa12.71□□□□□ -0.37
CPSF7-201ENST00000340437 SPP1P10451 314 aa12.71□□□□□ -0.37
CPSF7-201ENST00000340437 MUC1P15941 1255 aaPredicted RBP12.71□□□□□ -0.37
CPSF7-201ENST00000340437 TGIF1Q15583 401 aa12.71□□□□□ -0.37
CPSF7-201ENST00000340437 SWI5Q1ZZU3 235 aa12.71□□□□□ -0.37
CPSF7-201ENST00000340437 OR10Z1Q8NGY1 313 aa12.71□□□□□ -0.37
CPSF7-201ENST00000340437 OR5H15A6NDH6 313 aa12.71□□□□□ -0.38
CPSF7-201ENST00000340437 E9PLN8 166 aa12.71□□□□□ -0.38
CPSF7-201ENST00000340437 SFT2D2O95562 160 aa12.71□□□□□ -0.38
CPSF7-201ENST00000340437 DBHP09172 617 aa12.71□□□□□ -0.38
CPSF7-201ENST00000340437 TMEM225BP0DP42 221 aa12.71□□□□□ -0.38
CPSF7-201ENST00000340437 DAOP14920 347 aa12.71□□□□□ -0.38
CPSF7-201ENST00000340437 APOBEC1P41238 236 aaKnown RBP12.71□□□□□ -0.38
CPSF7-201ENST00000340437 CYCSP99999 105 aaKnown RBP12.71□□□□□ -0.38
CPSF7-201ENST00000340437 DYRK2Q92630 601 aa12.71□□□□□ -0.38
CPSF7-201ENST00000340437 PHYHIPLQ96FC7 376 aa12.71□□□□□ -0.38
CPSF7-201ENST00000340437 C14orf166Q9Y224 244 aaKnown RBP12.71□□□□□ -0.38
CPSF7-201ENST00000340437 FAM230AA0A1W2PPH8 454 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms