RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 MAP2K3P46734 347 aa12.85□□□□□ -0.35
UBE3B-201ENST00000340074 GZMKP49863 264 aa12.85□□□□□ -0.35
UBE3B-201ENST00000340074 AQP4P55087 323 aa12.85□□□□□ -0.35
UBE3B-201ENST00000340074 OR12D2P58182 307 aa12.85□□□□□ -0.35
UBE3B-201ENST00000340074 SNCBQ16143 134 aa12.85□□□□□ -0.35
UBE3B-201ENST00000340074 KLHL22Q53GT1 634 aa12.85□□□□□ -0.35
UBE3B-201ENST00000340074 C8orf59Q8N0T1 100 aaPredicted RBP12.85□□□□□ -0.35
UBE3B-201ENST00000340074 PRSS35Q8N3Z0 413 aa12.85□□□□□ -0.35
UBE3B-201ENST00000340074 SPERTQ8NA61 448 aa12.85□□□□□ -0.35
UBE3B-201ENST00000340074 PIGCQ92535 297 aa12.85□□□□□ -0.35
UBE3B-201ENST00000340074 TFAP2CQ92754 450 aa12.85□□□□□ -0.35
UBE3B-201ENST00000340074 HPS1Q92902 700 aa12.85□□□□□ -0.35
UBE3B-201ENST00000340074 RNF166Q96A37 237 aaPredicted RBP12.85□□□□□ -0.35
UBE3B-201ENST00000340074 MSI2Q96DH6 328 aaKnown RBP12.85□□□□□ -0.35
UBE3B-201ENST00000340074 UFSP2Q9NUQ7 469 aa12.85□□□□□ -0.35
UBE3B-201ENST00000340074 HSPE1-MOB4S4R3N1 261 aa12.85□□□□□ -0.35
UBE3B-201ENST00000340074 ARHGAP32A7KAX9 2087 aa12.85□□□□□ -0.35
UBE3B-201ENST00000340074 HIVEP2P31629 2446 aa12.85□□□□□ -0.35
UBE3B-201ENST00000340074 SVEP1Q4LDE5 3571 aa12.84□□□□□ -0.35
UBE3B-201ENST00000340074 ISPDA4D126 451 aa12.84□□□□□ -0.35
UBE3B-201ENST00000340074 ZNF850A8MQ14 1090 aa12.84□□□□□ -0.35
UBE3B-201ENST00000340074 J3QLW9 94 aa12.84□□□□□ -0.35
UBE3B-201ENST00000340074 IFNL4K9M1U5 179 aa12.84□□□□□ -0.35
UBE3B-201ENST00000340074 P2RY10O00398 339 aa12.84□□□□□ -0.35
UBE3B-201ENST00000340074 DHRS3O75911 302 aa12.84□□□□□ -0.35
UBE3B-201ENST00000340074 PTBP3O95758 552 aaKnown RBP12.84□□□□□ -0.35
UBE3B-201ENST00000340074 CST4P01036 141 aa12.84□□□□□ -0.35
UBE3B-201ENST00000340074 IGHV2-70P01814 119 aa12.84□□□□□ -0.35
UBE3B-201ENST00000340074 GRPP07492 148 aa12.84□□□□□ -0.35
UBE3B-201ENST00000340074 ZNF16P17020 682 aaPredicted RBP12.84□□□□□ -0.35
UBE3B-201ENST00000340074 ZNF19P17023 458 aa12.84□□□□□ -0.35
UBE3B-201ENST00000340074 ACTA2P62736 377 aa12.84□□□□□ -0.35
UBE3B-201ENST00000340074 ACTG2P63267 376 aa12.84□□□□□ -0.35
UBE3B-201ENST00000340074 PRDX4Q13162 271 aa12.84□□□□□ -0.35
UBE3B-201ENST00000340074 GALEQ14376 348 aa12.84□□□□□ -0.35
UBE3B-201ENST00000340074 ODF4Q2M2E3 257 aa12.84□□□□□ -0.35
UBE3B-201ENST00000340074 C6orf52Q5T4I8 152 aa12.84□□□□□ -0.35
UBE3B-201ENST00000340074 KCTD20Q7Z5Y7 419 aa12.84□□□□□ -0.35
UBE3B-201ENST00000340074 SEMA6DQ8NFY4 1073 aa12.84□□□□□ -0.35
UBE3B-201ENST00000340074 ERGIC1Q969X5 290 aa12.84□□□□□ -0.35
UBE3B-201ENST00000340074 ITPKCQ96DU7 683 aa12.84□□□□□ -0.35
UBE3B-201ENST00000340074 C4orf36Q96KX1 117 aa12.84□□□□□ -0.35
UBE3B-201ENST00000340074 ZNF649Q9BS31 505 aa12.84□□□□□ -0.35
UBE3B-201ENST00000340074 ALG8Q9BVK2 526 aa12.84□□□□□ -0.35
UBE3B-201ENST00000340074 ERVK13-1Q9NX77 482 aa12.84□□□□□ -0.35
UBE3B-201ENST00000340074 MPC1Q9Y5U8 109 aa12.84□□□□□ -0.35
UBE3B-201ENST00000340074 SETD2Q9BYW2 2564 aaPredicted RBP12.84□□□□□ -0.35
UBE3B-201ENST00000340074 SONP18583 2426 aaKnown RBP12.83□□□□□ -0.36
UBE3B-201ENST00000340074 A0A1B0GTI1 187 aa12.83□□□□□ -0.36
UBE3B-201ENST00000340074 LRRC30A6NM36 301 aa12.83□□□□□ -0.36
UBE3B-201ENST00000340074 MTRF1O75570 445 aaKnown RBP12.83□□□□□ -0.36
UBE3B-201ENST00000340074 ZNF205O95201 554 aa12.83□□□□□ -0.36
UBE3B-201ENST00000340074 ATP6V1B1P15313 513 aa12.83□□□□□ -0.36
UBE3B-201ENST00000340074 LMO4P61968 165 aa12.83□□□□□ -0.36
UBE3B-201ENST00000340074 BTG1P62324 171 aa12.83□□□□□ -0.36
UBE3B-201ENST00000340074 MZT1Q08AG7 82 aa12.83□□□□□ -0.36
UBE3B-201ENST00000340074 RIPPLY1Q0D2K3 151 aa12.83□□□□□ -0.36
UBE3B-201ENST00000340074 ZNF181Q2M3W8 571 aa12.83□□□□□ -0.36
UBE3B-201ENST00000340074 WDR38Q5JTN6 314 aa12.83□□□□□ -0.36
UBE3B-201ENST00000340074 WDR86Q86TI4 376 aa12.83□□□□□ -0.36
UBE3B-201ENST00000340074 PLPP7Q8NBV4 271 aa12.83□□□□□ -0.36
UBE3B-201ENST00000340074 Q8TCH9 128 aa12.83□□□□□ -0.36
UBE3B-201ENST00000340074 GAL3ST1Q99999 423 aa12.83□□□□□ -0.36
UBE3B-201ENST00000340074 ISG20L2Q9H9L3 353 aaKnown RBP12.83□□□□□ -0.36
UBE3B-201ENST00000340074 FN3KRPQ9HA64 309 aa12.83□□□□□ -0.36
UBE3B-201ENST00000340074 FGF20Q9NP95 211 aaPredicted RBP12.83□□□□□ -0.36
UBE3B-201ENST00000340074 YAE1D1Q9NRH1 226 aa12.83□□□□□ -0.36
UBE3B-201ENST00000340074 INPP5EQ9NRR6 644 aa12.83□□□□□ -0.36
UBE3B-201ENST00000340074 C14orf119Q9NWQ9 140 aa12.83□□□□□ -0.36
UBE3B-201ENST00000340074 PIGLQ9Y2B2 252 aa12.83□□□□□ -0.36
UBE3B-201ENST00000340074 FN1P02751 2386 aaKnown RBP12.82□□□□□ -0.36
UBE3B-201ENST00000340074 ZNF816-ZNF321PA0A0X1KG74 233 aa12.82□□□□□ -0.36
UBE3B-201ENST00000340074 ANXA2P2A6NMY6 339 aa12.82□□□□□ -0.36
UBE3B-201ENST00000340074 H0YJX3 145 aa12.82□□□□□ -0.36
UBE3B-201ENST00000340074 H3BSH0 61 aa12.82□□□□□ -0.36
UBE3B-201ENST00000340074 ATP6V1G2O95670 118 aa12.82□□□□□ -0.36
UBE3B-201ENST00000340074 IRF2P14316 349 aa12.82□□□□□ -0.36
UBE3B-201ENST00000340074 FAHP16930 419 aa12.82□□□□□ -0.36
UBE3B-201ENST00000340074 KIR3DL2P43630 455 aa12.82□□□□□ -0.36
UBE3B-201ENST00000340074 RIPK1Q13546 671 aa12.82□□□□□ -0.36
UBE3B-201ENST00000340074 ZMYND11Q15326 602 aa12.82□□□□□ -0.36
UBE3B-201ENST00000340074 FAM201AQ5SY85 155 aa12.82□□□□□ -0.36
UBE3B-201ENST00000340074 THAP5Q7Z6K1 395 aa12.82□□□□□ -0.36
UBE3B-201ENST00000340074 ZDHHC23Q8IYP9 409 aa12.82□□□□□ -0.36
UBE3B-201ENST00000340074 OR11L1Q8NGX0 322 aa12.82□□□□□ -0.36
UBE3B-201ENST00000340074 OR2G2Q8NGZ5 317 aa12.82□□□□□ -0.36
UBE3B-201ENST00000340074 ITFG2Q969R8 447 aa12.82□□□□□ -0.36
UBE3B-201ENST00000340074 PELI1Q96FA3 418 aa12.82□□□□□ -0.36
UBE3B-201ENST00000340074 MRPL48Q96GC5 212 aaKnown RBP12.82□□□□□ -0.36
UBE3B-201ENST00000340074 C1orf159Q96HA4 380 aa12.82□□□□□ -0.36
UBE3B-201ENST00000340074 MYCBPQ99417 103 aaPredicted RBP12.82□□□□□ -0.36
UBE3B-201ENST00000340074 ZNF665Q9H7R5 613 aa12.82□□□□□ -0.36
UBE3B-201ENST00000340074 UBAP1Q9NZ09 502 aa12.82□□□□□ -0.36
UBE3B-201ENST00000340074 FRRS1LQ9P0K9 344 aa12.82□□□□□ -0.36
UBE3B-201ENST00000340074 V9GYS6 101 aa12.82□□□□□ -0.36
UBE3B-201ENST00000340074 NF1P21359 2839 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 A6NIN4 97 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 A6NLC8 198 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 FAM157AC9JC47 383 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 INAFM1C9JVW0 142 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms