RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 CNPY1Q3B7I2 92 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 CLVS2Q5SYC1 327 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 TMEM42Q69YG0 159 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 SSC4DQ8WTU2 575 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 CMBLQ96DG6 245 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 CPNE2Q96FN4 548 aaPredicted RBP12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 TPK1Q9H3S4 243 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 TMEM138Q9NPI0 162 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 PTTG2Q9NZH5 202 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 MRPL15Q9P015 296 aaKnown RBP12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 KCNN3Q9UGI6 736 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 RALYQ9UKM9 306 aaKnown RBP12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 ANKRD30BLA7E2S9 258 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 VSTM5A8MXK1 200 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 IQCF6A8MYZ5 107 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 J3QKU1 62 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 GOSR1O95249 250 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 OCMP0CE72 109 aaPredicted RBP12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 PLA2G2AP14555 144 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 KITLGP21583 273 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 RORCP51449 518 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 ERVS71-1P61550 626 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 MXD1Q05195 221 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 CNN3Q15417 329 aaKnown RBP12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 ASPHD2Q6ICH7 369 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 CDH26Q8IXH8 852 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 DMRTC2Q8IXT2 367 aaPredicted RBP12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 OR1M1Q8NGA1 313 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 TMEM171Q8WVE6 324 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 SPSB1Q96BD6 273 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 DCUN1D5Q9BTE7 237 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 CA10Q9NS85 328 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 POU2F3Q9UKI9 436 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 NOP16Q9Y3C1 178 aaKnown RBP12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 RNF115Q9Y4L5 304 aa12.48□□□□□ -0.41
NIPAL3-202ENST00000339255 SHISA3A0PJX4 238 aa12.47□□□□□ -0.41
NIPAL3-202ENST00000339255 MAGEB3O15480 346 aa12.47□□□□□ -0.41
NIPAL3-202ENST00000339255 NRASP01111 189 aa12.47□□□□□ -0.41
NIPAL3-202ENST00000339255 ZNF182P17025 639 aaPredicted RBP12.47□□□□□ -0.41
NIPAL3-202ENST00000339255 RANBP1P43487 201 aa12.47□□□□□ -0.41
NIPAL3-202ENST00000339255 KLF3P57682 345 aaPredicted RBP12.47□□□□□ -0.41
NIPAL3-202ENST00000339255 PSG7Q13046 419 aa12.47□□□□□ -0.41
NIPAL3-202ENST00000339255 SNTB1Q13884 538 aaKnown RBP12.47□□□□□ -0.41
NIPAL3-202ENST00000339255 DGUOKQ16854 277 aa12.47□□□□□ -0.41
NIPAL3-202ENST00000339255 CEP78Q5JTW2 689 aa12.47□□□□□ -0.41
NIPAL3-202ENST00000339255 LRRTM1Q86UE6 522 aa12.47□□□□□ -0.41
NIPAL3-202ENST00000339255 OR13C9Q8NGT0 318 aa12.47□□□□□ -0.41
NIPAL3-202ENST00000339255 SYNPRQ8TBG9 265 aa12.47□□□□□ -0.41
NIPAL3-202ENST00000339255 UBASH3BQ8TF42 649 aa12.47□□□□□ -0.41
NIPAL3-202ENST00000339255 ORAI1Q96D31 301 aa12.47□□□□□ -0.41
NIPAL3-202ENST00000339255 PAPOLGQ9BWT3 736 aaKnown RBP12.47□□□□□ -0.41
NIPAL3-202ENST00000339255 SLC22A4Q9H015 551 aa12.47□□□□□ -0.41
NIPAL3-202ENST00000339255 CRIM1Q9NZV1 1036 aa12.47□□□□□ -0.41
NIPAL3-202ENST00000339255 CGGBP1Q9UFW8 167 aaPredicted RBP12.47□□□□□ -0.41
NIPAL3-202ENST00000339255 CMAHPQ9Y471 501 aa12.47□□□□□ -0.41
NIPAL3-202ENST00000339255 MPC1Q9Y5U8 109 aa12.47□□□□□ -0.41
NIPAL3-202ENST00000339255 PKDREJQ9NTG1 2253 aa12.47□□□□□ -0.41
NIPAL3-202ENST00000339255 A6NIN4 97 aa12.46□□□□□ -0.41
NIPAL3-202ENST00000339255 NOTOA8MTQ0 251 aa12.46□□□□□ -0.41
NIPAL3-202ENST00000339255 DEFB108AA8MXU0 73 aa12.46□□□□□ -0.41
NIPAL3-202ENST00000339255 GMDSO60547 372 aa12.46□□□□□ -0.41
NIPAL3-202ENST00000339255 IGHV3-13P01766 116 aa12.46□□□□□ -0.41
NIPAL3-202ENST00000339255 MAS1P04201 325 aa12.46□□□□□ -0.41
NIPAL3-202ENST00000339255 ALDOBP05062 364 aa12.46□□□□□ -0.41
NIPAL3-202ENST00000339255 PRKACBP22694 351 aa12.46□□□□□ -0.41
NIPAL3-202ENST00000339255 CFPP27918 469 aa12.46□□□□□ -0.41
NIPAL3-202ENST00000339255 BDKRB2P30411 391 aa12.46□□□□□ -0.41
NIPAL3-202ENST00000339255 PRSS12P56730 875 aa12.46□□□□□ -0.41
NIPAL3-202ENST00000339255 HNRNPA0Q13151 305 aaKnown RBP12.46□□□□□ -0.41
NIPAL3-202ENST00000339255 MOGQ16653 247 aa12.46□□□□□ -0.41
NIPAL3-202ENST00000339255 GLT8D1Q68CQ7 371 aa12.46□□□□□ -0.41
NIPAL3-202ENST00000339255 OR2T2Q6IF00 324 aa12.46□□□□□ -0.41
NIPAL3-202ENST00000339255 ADAM5Q6NVV9 412 aa12.46□□□□□ -0.41
NIPAL3-202ENST00000339255 ACBD4Q8NC06 268 aa12.46□□□□□ -0.41
NIPAL3-202ENST00000339255 BHLHE23Q8NDY6 225 aa12.46□□□□□ -0.41
NIPAL3-202ENST00000339255 AP3S1Q92572 193 aa12.46□□□□□ -0.41
NIPAL3-202ENST00000339255 FOXRED1Q96CU9 486 aaPredicted RBP12.46□□□□□ -0.41
NIPAL3-202ENST00000339255 PURGQ9UJV8 347 aaKnown RBP12.46□□□□□ -0.41
NIPAL3-202ENST00000339255 A3GALT2U3KPV4 340 aa12.46□□□□□ -0.41
NIPAL3-202ENST00000339255 V9GY05 133 aa12.46□□□□□ -0.41
NIPAL3-202ENST00000339255 IGLV3-9A0A075B6K5 115 aa12.45□□□□□ -0.42
NIPAL3-202ENST00000339255 CLEC18AA5D8T8 446 aa12.45□□□□□ -0.42
NIPAL3-202ENST00000339255 SHISA9B4DS77 424 aa12.45□□□□□ -0.42
NIPAL3-202ENST00000339255 AIPO00170 330 aa12.45□□□□□ -0.42
NIPAL3-202ENST00000339255 TIMM8AO60220 97 aaPredicted RBP12.45□□□□□ -0.42
NIPAL3-202ENST00000339255 ADRA2CP18825 462 aa12.45□□□□□ -0.42
NIPAL3-202ENST00000339255 MPV17P39210 176 aa12.45□□□□□ -0.42
NIPAL3-202ENST00000339255 FABP6P51161 128 aa12.45□□□□□ -0.42
NIPAL3-202ENST00000339255 SFXN4Q6P4A7 337 aa12.45□□□□□ -0.42
NIPAL3-202ENST00000339255 CLEC18BQ6UXF7 455 aa12.45□□□□□ -0.42
NIPAL3-202ENST00000339255 ZDHHC23Q8IYP9 409 aa12.45□□□□□ -0.42
NIPAL3-202ENST00000339255 CLEC18CQ8NCF0 446 aa12.45□□□□□ -0.42
NIPAL3-202ENST00000339255 DNAAF1Q8NEP3 725 aa12.45□□□□□ -0.42
NIPAL3-202ENST00000339255 KCTD12Q96CX2 325 aaKnown RBP12.45□□□□□ -0.42
NIPAL3-202ENST00000339255 UQCC2Q9BRT2 126 aa12.45□□□□□ -0.42
NIPAL3-202ENST00000339255 TMEM204Q9BSN7 226 aa12.45□□□□□ -0.42
NIPAL3-202ENST00000339255 SLC7A11Q9UPY5 501 aa12.45□□□□□ -0.42
NIPAL3-202ENST00000339255 RHBDD3Q9Y3P4 386 aa12.45□□□□□ -0.42
NIPAL3-202ENST00000339255 ATP23Q9Y6H3 246 aa12.45□□□□□ -0.42
NIPAL3-202ENST00000339255 HELZ2Q9BYK8 2649 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms